mRNA_Ecto-sp13_S_contig57126.16108.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig57126.16108.1 vs. uniprot
Match: D8LE27_ECTSI (Autophagy-related protein 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE27_ECTSI) HSP 1 Score: 156 bits (395), Expect = 1.720e-42 Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 1
Query: 25 VLQSWVQDITTNQLHKFLAGTTAVRPLVTMGKGVADLVLLPVQQYRRDGRVLRGLRKGTQSFLRAITIETLHTSHRVAS 261
+LQSWVQDITTNQLHKFLAGTTAVRPLVTMGKGVADLVLLPVQQYRRDGRVLRGLRKGTQSFLRAITIETLHTSHRVAS
Sbjct: 2025 LLQSWVQDITTNQLHKFLAGTTAVRPLVTMGKGVADLVLLPVQQYRRDGRVLRGLRKGTQSFLRAITIETLHTSHRVAS 2103
BLAST of mRNA_Ecto-sp13_S_contig57126.16108.1 vs. uniprot
Match: A0A835YJZ3_9STRA (Autophagy-related protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJZ3_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.400e-25 Identity = 47/78 (60.26%), Postives = 66/78 (84.62%), Query Frame = 1
Query: 22 AVLQSWVQDITTNQLHKFLAGTTAVRPLVTMGKGVADLVLLPVQQYRRDGRVLRGLRKGTQSFLRAITIETLHTSHRV 255
A L+SWV+D+T +QLHKFLAGT AVRPLV +G+G+ADLVL+P++QY+RDG++LRG+RKGT + ETL+TS+++
Sbjct: 162 ACLESWVRDVTGSQLHKFLAGTAAVRPLVNVGRGMADLVLVPLKQYKRDGKILRGIRKGTAQCAGRVLAETLNTSYKL 239
BLAST of mRNA_Ecto-sp13_S_contig57126.16108.1 vs. uniprot
Match: A0A1V9ZLL8_9STRA (Autophagy-related protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLL8_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 6.810e-21 Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 1
Query: 28 LQSWVQDITTNQLHKFLAGTTAVRPLVTMGKGVADLVLLPVQQYRRDGRVLRGLRKGTQSFLRAITIETLHTSHRVA 258
L SWVQDI+ +Q+HK LA +R + +G G ADL+LLP+ QY +D RV+RGLRKG +SFL+++TIETL+T+ RVA
Sbjct: 1685 LLSWVQDISRHQIHKCLASVVPMRSITNIGAGAADLILLPMAQYGKDRRVVRGLRKGAKSFLKSVTIETLNTASRVA 1761
BLAST of mRNA_Ecto-sp13_S_contig57126.16108.1 vs. uniprot
Match: A0A067CPJ1_SAPPC (CP-type G domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CPJ1_SAPPC) HSP 1 Score: 95.1 bits (235), Expect = 6.830e-21 Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 1
Query: 28 LQSWVQDITTNQLHKFLAGTTAVRPLVTMGKGVADLVLLPVQQYRRDGRVLRGLRKGTQSFLRAITIETLHTSHRVA 258
L SWVQDI+ +Q+HK LA +R + +G G ADL+LLP+ QY +D RV+RGLRKG +SFL+++TIETL+T+ RVA
Sbjct: 1695 LLSWVQDISRHQIHKCLASVVPMRSITNIGAGAADLILLPMAQYGKDRRVVRGLRKGAKSFLKSVTIETLNTASRVA 1771
BLAST of mRNA_Ecto-sp13_S_contig57126.16108.1 vs. uniprot
Match: A0A1V9ZZI2_9STRA (Autophagy-related protein 2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZI2_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 8.220e-20 Identity = 42/81 (51.85%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 16 LAAVLQSWVQDITTNQLHKFLAGTTAVRPLVTMGKGVADLVLLPVQQYRRDGRVLRGLRKGTQSFLRAITIETLHTSHRVA 258
L + WV+DI+ +Q+HK LA +R + +G G ADL+LLP+ QY +D RV+RGLRKG +SFL+++TIETL+T+ RVA
Sbjct: 1725 LQQTMVRWVEDISRHQIHKCLASVVPMRSITNIGAGAADLILLPMAQYGKDRRVVRGLRKGAKSFLKSVTIETLNTASRVA 1805
BLAST of mRNA_Ecto-sp13_S_contig57126.16108.1 vs. uniprot
Match: A0A3F2RU62_9STRA (Autophagy-related protein 2 n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RU62_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.120e-19 Identity = 43/80 (53.75%), Postives = 62/80 (77.50%), Query Frame = 1
Query: 25 VLQSWVQDITTNQLHKFLAGTTA--VRPLVTMGKGVADLVLLPVQQYRRDGRVLRGLRKGTQSFLRAITIETLHTSHRVA 258
VL SWVQDI+ +Q+HK +A + +RP V +G G ADL+LLP++ Y RD R++RGL+KG SFL+++TIETL+T+ +VA
Sbjct: 1253 VLISWVQDISRHQIHKCVASVSMPPLRPFVNIGAGAADLILLPIEHYGRDRRLVRGLKKGASSFLKSVTIETLNTASKVA 1332
BLAST of mRNA_Ecto-sp13_S_contig57126.16108.1 vs. uniprot
Match: M4BBC8_HYAAE (Autophagy-related protein 2 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BBC8_HYAAE) HSP 1 Score: 91.3 bits (225), Expect = 1.520e-19 Identity = 43/80 (53.75%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 25 VLQSWVQDITTNQLHKFLAGTTA--VRPLVTMGKGVADLVLLPVQQYRRDGRVLRGLRKGTQSFLRAITIETLHTSHRVA 258
VL SWVQDI+ Q+HK +A + +RP V +G G ADL+LLP++ Y RD R++RG++KG SFLR++TIETL+T+ +VA
Sbjct: 1208 VLVSWVQDISRRQIHKCVASVSMPPLRPFVNIGAGAADLILLPMEHYGRDRRLVRGMKKGASSFLRSVTIETLNTASKVA 1287
BLAST of mRNA_Ecto-sp13_S_contig57126.16108.1 vs. uniprot
Match: A0A6G0WUQ4_9STRA (Autophagy-related protein 2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUQ4_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.090e-19 Identity = 41/74 (55.41%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 37 WVQDITTNQLHKFLAGTTAVRPLVTMGKGVADLVLLPVQQYRRDGRVLRGLRKGTQSFLRAITIETLHTSHRVA 258
WVQDI+ +Q+HK LA +R + +G G ADL+LLP+ QY +D RV+RGLRKG SFLR++TIETL+T+ ++A
Sbjct: 1653 WVQDISRHQIHKCLASVVPMRSITNIGAGAADLILLPMAQYGKDRRVVRGLRKGATSFLRSVTIETLNTASKLA 1726
BLAST of mRNA_Ecto-sp13_S_contig57126.16108.1 vs. uniprot
Match: A0A418DBW1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DBW1_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.330e-19 Identity = 42/77 (54.55%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 28 LQSWVQDITTNQLHKFLAGTTAVRPLVTMGKGVADLVLLPVQQYRRDGRVLRGLRKGTQSFLRAITIETLHTSHRVA 258
L WVQDI+ +Q+HK LA +R L +G G ADL+LLP+ QY +D RV+RGLRKG SFL+++TIETL+T+ ++A
Sbjct: 287 LVHWVQDISRHQIHKCLASVVPMRSLSNIGAGAADLILLPMAQYGKDRRVVRGLRKGATSFLKSVTIETLNTASKLA 363
BLAST of mRNA_Ecto-sp13_S_contig57126.16108.1 vs. uniprot
Match: A0A662Y9D1_9STRA (Autophagy-related protein 2 (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y9D1_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.810e-19 Identity = 42/80 (52.50%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 25 VLQSWVQDITTNQLHKFLAGTTA--VRPLVTMGKGVADLVLLPVQQYRRDGRVLRGLRKGTQSFLRAITIETLHTSHRVA 258
VL SWVQDI+ +Q+HK +A + +RP +G G ADL+LLP++ Y RD R++RGL+KG SFL+++TIETL T+ +VA
Sbjct: 54 VLLSWVQDISRHQIHKCVASVSMPPLRPFANIGAGAADLILLPMEHYGRDRRLVRGLKKGASSFLKSVTIETLTTASKVA 133 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57126.16108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig57126.16108.1 >prot_Ecto-sp13_S_contig57126.16108.1 ID=prot_Ecto-sp13_S_contig57126.16108.1|Name=mRNA_Ecto-sp13_S_contig57126.16108.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp MRSHALAAVLQSWVQDITTNQLHKFLAGTTAVRPLVTMGKGVADLVLLPVback to top mRNA from alignment at Ecto-sp13_S_contig57126:180..881+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig57126.16108.1 ID=mRNA_Ecto-sp13_S_contig57126.16108.1|Name=mRNA_Ecto-sp13_S_contig57126.16108.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=702bp|location=Sequence derived from alignment at Ecto-sp13_S_contig57126:180..881+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig57126:180..881+ >mRNA_Ecto-sp13_S_contig57126.16108.1 ID=mRNA_Ecto-sp13_S_contig57126.16108.1|Name=mRNA_Ecto-sp13_S_contig57126.16108.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=261bp|location=Sequence derived from alignment at Ecto-sp13_S_contig57126:180..881+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |