mRNA_Ecto-sp13_S_contig5700.16079.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5700.16079.1
Unique NamemRNA_Ecto-sp13_S_contig5700.16079.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5700.16079.1 vs. uniprot
Match: D8LHB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB5_ECTSI)

HSP 1 Score: 499 bits (1285), Expect = 2.190e-168
Identity = 305/330 (92.42%), Postives = 306/330 (92.73%), Query Frame = 1 
Query:  703 AWDPFAPGPQSNGQXXXXXXXX-ADDWGLGELTDADIWGNLPSKKETVEDESNWSDDDASEGSRDDGASRSTSLSGGGXXXXXXXXX----RSGTKKN-LRQEQEDLELALRLQREXXERASTPGGGSGGSRGLSGIDRSMGASGGGREVAIRPRQAAGGKADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRKVYKEHGYLWHFTLEEQMDYGPSIVAKFAHHERRVLEDLGQRLAEAIREKRRLRQRFNQYGGSANHRGGSXXXXXXXXXXXGGRQPYSNGMNNGRRGEYDEA 1674
            AWDPFAPGPQSNGQXXXXXXXX ADDWGLGELTDADIWGNLPSKKETVEDESNWSDDDASEGSRDD ASRSTSLSGGGXXXXXXXXX    RSGTKKN +RQEQEDLELALRLQREXX            SRGLSGIDRSMGASGG REVAIRPRQAAGGKADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRKVYKEHGYLWHFTLEEQMDYGPSIVAKFAHHERRVLEDLGQRLAEAIREKRRLRQRFNQYGGSANHRGG XXXXXXXXXXX  RQPYSNGMNNGRRGEYDE 
Sbjct:  213 AWDPFAPGPQSNGQXXXXXXXXXADDWGLGELTDADIWGNLPSKKETVEDESNWSDDDASEGSRDDAASRSTSLSGGGXXXXXXXXXXXGDRSGTKKNSIRQEQEDLELALRLQREXXXXXXXXXXXXXXSRGLSGIDRSMGASGGSREVAIRPRQAAGGKADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRKVYKEHGYLWHFTLEEQMDYGPSIVAKFAHHERRVLEDLGQRLAEAIREKRRLRQRFNQYGGSANHRGGGXXXXXXXXXXXXXRQPYSNGMNNGRRGEYDEG 542
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BLAST of mRNA_Ecto-sp13_S_contig5700.16079.1 vs. uniprot
Match: A0A6H5K285_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K285_9PHAE)

HSP 1 Score: 494 bits (1273), Expect = 4.430e-166
Identity = 328/387 (84.75%), Postives = 334/387 (86.30%), Query Frame = 1 
Query:  514 SQVLASAANPFSNQLAPAPVGFVQSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWDPFAPGPQSNGQXXXXXXXXADDWGLGELTDADIWGNLPSKKETVEDESNWSDDDASEGSRDDGASRSTSLSGGGXXXXXXXXXRSGTKKNLRQEQEDLELALRLQREXXERASTPGGGSGGSRGLSGIDRSMGASGGGREVAIRPRQAAGGKADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRKVYKEHGYLWHFTLEEQMDYGPSIVAKFAHHERRVLEDLGQRLAEAIREKRRLRQRFNQYGGSANHRGGSXXXXXXXXXXXGGRQPYSNGMNNGRRGEYDEA 1674
            +QVLASAANPFSNQLAPAPVGFVQSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       ADDWGLGELTDADIWGNLPSKKETVEDESNWSDDDASEGSRDD ASRSTS+SGGGXXXXXXXX RSG K ++RQEQEDLELALRLQREXX            SRGLSGIDRSMGASGG REVAIRPRQAAGGKADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLK+KVYKEHGYLWHFTLEEQMDYGPSIVAKFAHHERRVLEDLGQRLAEAIREKRRLRQRFNQYGGSANHRGG          XX  R+ YSNGMNNGRRGEYDEA
Sbjct:  214 NQVLASAANPFSNQLAPAPVGFVQSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------ADDWGLGELTDADIWGNLPSKKETVEDESNWSDDDASEGSRDDAASRSTSISGGGXXXXXXXXNRSGPKNSVRQEQEDLELALRLQREXXXXXXXXXXXXXXSRGLSGIDRSMGASGGSREVAIRPRQAAGGKADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKQKVYKEHGYLWHFTLEEQMDYGPSIVAKFAHHERRVLEDLGQRLAEAIREKRRLRQRFNQYGGSANHRGGGGGARGYGGQXXXXRELYSNGMNNGRRGEYDEA 577
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BLAST of mRNA_Ecto-sp13_S_contig5700.16079.1 vs. uniprot
Match: A0A835YW21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW21_9STRA)

HSP 1 Score: 199 bits (505), Expect = 2.950e-54
Identity = 97/142 (68.31%), Postives = 119/142 (83.80%), Query Frame = 1 
Query: 1144 PRQAAGG-KADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRKVYKEHGYLWHFTLEEQMDYGPSIVAKFAHHERRVLEDLGQRLAEAIREKRRLRQRFNQYGGSANH 1566
            P++AAG  K DGEC ARIS RTLLVK WK TYFIFEL DLLLLYRSR+D++Y+P+GT IKKR+E++H+HTLT LKRK YK++GYLWHFT+EEQMDYGP+IVAKFA+ ++R LE+LG ++AE IREKRR R R +QY     H
Sbjct:  149 PQRAAGADKPDGECLARISKRTLLVKAWKPTYFIFELADLLLLYRSREDYIYHPKGTCIKKRIEIRHSHTLTPLKRKYYKDYGYLWHFTMEEQMDYGPAIVAKFAYQDKRPLEELGNKIAEGIREKRRTRARLSQYSYGGGH 290
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BLAST of mRNA_Ecto-sp13_S_contig5700.16079.1 vs. uniprot
Match: A0A836C852_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C852_9STRA)

HSP 1 Score: 208 bits (529), Expect = 7.540e-54
Identity = 140/274 (51.09%), Postives = 163/274 (59.49%), Query Frame = 1 
Query:  787 GELTDADIWGNLPSKKETVEDESNWSDDDASEGSRDDGAS----RSTSLSGGGXXXXXXXXXR--------------SGTKKNLRQEQEDLELALRLQREXXERASTPGGGSGGSRGLSGIDRSMGASGGGREVAIRPRQAAGG--KADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRKVYKEHGYLWHFTLEEQMDYGPSIVAKFAHHERRVLEDLGQRLAEAIREKRRLRQRFNQY 1548
            G+LTDADIWG+   + +    +S  SDD+    S   GA+     ST      XXX      R              S  +    QE  D +LAL+LQ+E   RA                       G   E A  PR  + G  K DGEC ARIS RTLLV  WK TYFIFELPDLLLLYRSRDD +YNPRG MIKKR+E+KHNHTLT LKRK YK++GYLWHFTLEEQ+DYGPSIVAKF   ++R LEDLG R+AEAIR+KRR+R R NQY
Sbjct: 1314 GDLTDADIWGDQKGEAKPAGAKSPASDDEPHTPSAHAGAAPPPGSSTYXXXXXXXXVAKAALRAEWSDDDDGGAGSISSGRSPRAQEDSDYQLALKLQQEEEARAR----------------------GEAPESASPPRTESKGSDKPDGECLARISKRTLLV--WKNTYFIFELPDLLLLYRSRDDRLYNPRGLMIKKRIEIKHNHTLTPLKRKFYKDYGYLWHFTLEEQLDYGPSIVAKFGFQDKRPLEDLGNRIAEAIRDKRRVRARLNQY 1563
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BLAST of mRNA_Ecto-sp13_S_contig5700.16079.1 vs. uniprot
Match: A0A6V1S9Y9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S9Y9_HETAK)

HSP 1 Score: 133 bits (334), Expect = 2.770e-32
Identity = 70/130 (53.85%), Postives = 93/130 (71.54%), Query Frame = 1 
Query: 1168 ADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRKVYKEHGYLWHFTLEEQMDYGPSIVAKFAHHERRVLEDLGQRLAEAIREKRRLRQRF-NQYGG 1554
            A GE  ARIS+RTLLVK+WK TY++F     L LYRS+++ +YNPRG  +KK++ +  NHT T +KRK Y+ +GYL HFTLEEQMDYGPS  AKFA H+R+ L+ L   + + I   R LR+ + +QYGG
Sbjct:   12 AQGEVLARISMRTLLVKEWKPTYWVFLGRQTLGLYRSKNEFLYNPRGQGMKKKIVINQNHTCTAIKRKEYRGYGYLDHFTLEEQMDYGPSTAAKFASHDRQGLQALRDHVLKVISHVRDLRRAYKSQYGG 141
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BLAST of mRNA_Ecto-sp13_S_contig5700.16079.1 vs. uniprot
Match: A0A7S1U4J7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4J7_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.790e-20
Identity = 55/127 (43.31%), Postives = 80/127 (62.99%), Query Frame = 1 
Query: 1126 REVAIRPRQAAGGKADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRKVYKEHGYLWHFTLEEQMDYGPSIVAKFAHHERRVLEDLGQRLAEA 1506
            R +    RQ +  +  G   AR+S+R+L+VK W+ T++IF+    +LLYR+R D + NP+GT IK R+ + HN  +  +K K Y+  G L HFTL+E  DYGP  VAKFA H+R  +E + + L EA
Sbjct:  215 RSLKFLARQESTERPQGVVLARLSLRSLVVKSWRPTFWIFDDEKTVLLYRNRQDWLLNPKGTAIKARINIGHNFIVGEVKFKEYRGIGRLHHFTLDEMFDYGPQTVAKFAGHKRGDIEAIYRCLEEA 341
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BLAST of mRNA_Ecto-sp13_S_contig5700.16079.1 vs. uniprot
Match: W7TUJ4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUJ4_9STRA)

HSP 1 Score: 101 bits (252), Expect = 3.460e-19
Identity = 59/126 (46.83%), Postives = 80/126 (63.49%), Query Frame = 1 
Query: 1165 KADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRKVYKEHGYLWHFTLEEQMDYGPSIVAKFAHHERRVLEDLGQRLAEAI--REKRRLRQR 1536
            K +G   ARISVRTL+VK+WK T++       LLLYRSR+D +YNP G M+KK + +  N   + +  K YK +G L+HFTLEE +DYGPS+VAKFA    + + +L   +   I    K+RLR R
Sbjct:  305 KTEGTILARISVRTLIVKEWKDTFWTIN-KGKLLLYRSREDFLYNPVGVMVKKDIPLCDNLRCSEVTCKPYKGYGDLYHFTLEEMLDYGPSLVAKFASRRAKSVRELRAVIVAYIIAERKKRLRAR 429
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BLAST of mRNA_Ecto-sp13_S_contig5700.16079.1 vs. uniprot
Match: A0A7S2AUE6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AUE6_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.550e-10
Identity = 41/110 (37.27%), Postives = 65/110 (59.09%), Query Frame = 1 
Query: 1171 DGECFARISVRTLLVKKWKTTYFIFELP-DLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRKVYKEHGYLWHFTLEEQMDYGPSIVAKFA-----HHERRVLED 1482
            +G C  RI+ + +L K W+  ++  EL    LL+YR+RDD+ Y P+G M+KK +++K   T + +  K YK +G L+HFTLEE      S + +FA     H + ++L D
Sbjct:  309 EGVCKGRITRKDMLTKNWQDIFWFLELSTSTLLIYRTRDDYYYQPKGKMVKKAIQIKETVTCSEITMKDYKANGELFHFTLEE----AGSALGRFAVDREHHADLKILRD 414
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BLAST of mRNA_Ecto-sp13_S_contig5700.16079.1 vs. uniprot
Match: A0A482UXB5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UXB5_9ARCH)

HSP 1 Score: 63.5 bits (153), Expect = 5.890e-9
Identity = 36/87 (41.38%), Postives = 53/87 (60.92%), Query Frame = 1 
Query: 1285 DHMYNPRGTMIKKRVEVKHNHTLTRLKRKVYKEHGYLWHFTLEEQMDYGPSIVAKFAHHERRVLEDLGQRLAEAIREKRRLRQRFNQ 1545
            D + N  G   KKR+ + HN  + ++K K YK HG L+HF LEE MDYGP+ V KFA   ++ L +  +RL + I  +R +R + N+
Sbjct:    2 DCVSNRAGVGAKKRIVITHNMRVLQIKCKEYKGHGMLYHFMLEELMDYGPNNVGKFASTYQQQLLEFWKRLRQIILVRREIRAKQNK 88
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BLAST of mRNA_Ecto-sp13_S_contig5700.16079.1 vs. uniprot
Match: A0A7S1V179_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V179_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.520e-7
Identity = 44/130 (33.85%), Postives = 70/130 (53.85%), Query Frame = 1 
Query: 1174 GECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSR---DDHMYNP------RGTMIKKRVEVKHN--------HTLTRLKRKVYKEHGYLWHFTLEEQMDYGPSIVAKFAHHERRVLEDLGQRLAEAIR 1512
            G   +RIS RT+++KKWK TY++   P  +L +RS    DD + NP      R  ++K  V   H+        + +T+ + K Y +   L  F LE  MDYGP+I A FA H+ + +++L Q + + +R
Sbjct:  494 GYVLSRISFRTIMLKKWKQTYWVQYGPHTMLWFRSHSDFDDWLNNPYHTQAQRNFLVKLAVNFVHDLYKPNVRGYQVTQARTKAYSK-KMLKQFKLERWMDYGPTIAAAFASHDAKEVDELRQTIIDCMR 622
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5700.16079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LHB5_ECTSI2.190e-16892.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K285_9PHAE4.430e-16684.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YW21_9STRA2.950e-5468.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C852_9STRA7.540e-5451.09Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A6V1S9Y9_HETAK2.770e-3253.85Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1U4J7_9STRA3.790e-2043.31Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TUJ4_9STRA3.460e-1946.83Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2AUE6_9STRA1.550e-1037.27Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A482UXB5_9ARCH5.890e-941.38Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S1V179_9STRA1.520e-733.85Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5700contigEcto-sp13_S_contig5700:656..8427 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1698
Hectar predicted targeting categoryother localisation
Exons9
Cds size1689
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5700.16079.1prot_Ecto-sp13_S_contig5700.16079.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5700 656..8418 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463789.9545686-CDS-Ecto-sp13_S_contig5700:655..8591681463789.9545686-CDS-Ecto-sp13_S_contig5700:655..859Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5700 656..859 -
1681463789.9643776-CDS-Ecto-sp13_S_contig5700:1391..15141681463789.9643776-CDS-Ecto-sp13_S_contig5700:1391..1514Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5700 1392..1514 -
1681463789.973205-CDS-Ecto-sp13_S_contig5700:1937..21811681463789.973205-CDS-Ecto-sp13_S_contig5700:1937..2181Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5700 1938..2181 -
1681463789.9820979-CDS-Ecto-sp13_S_contig5700:3037..31081681463789.9820979-CDS-Ecto-sp13_S_contig5700:3037..3108Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5700 3038..3108 -
1681463789.9920595-CDS-Ecto-sp13_S_contig5700:3916..39861681463789.9920595-CDS-Ecto-sp13_S_contig5700:3916..3986Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5700 3917..3986 -
1681463790.0026963-CDS-Ecto-sp13_S_contig5700:4411..45571681463790.0026963-CDS-Ecto-sp13_S_contig5700:4411..4557Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5700 4412..4557 -
1681463790.0131598-CDS-Ecto-sp13_S_contig5700:5405..55581681463790.0131598-CDS-Ecto-sp13_S_contig5700:5405..5558Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5700 5406..5558 -
1681463790.023686-CDS-Ecto-sp13_S_contig5700:6459..69321681463790.023686-CDS-Ecto-sp13_S_contig5700:6459..6932Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5700 6460..6932 -
1681463790.0337875-CDS-Ecto-sp13_S_contig5700:8213..84181681463790.0337875-CDS-Ecto-sp13_S_contig5700:8213..8418Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5700 8214..8418 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463790.043613-UTR-Ecto-sp13_S_contig5700:8418..84271681463790.043613-UTR-Ecto-sp13_S_contig5700:8418..8427Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5700 8419..8427 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5700.16079.1

>prot_Ecto-sp13_S_contig5700.16079.1 ID=prot_Ecto-sp13_S_contig5700.16079.1|Name=mRNA_Ecto-sp13_S_contig5700.16079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=563bp
MQGGLQQQGGMQQQGGMQQQGMGGGTGFGGGMTQPQQQQPQQQQQQQPFG
VQQGGSSQQALVPYGSQTGQPQQQQQGGLLALGPSTSSSDPFAPTTAGGG
GGGGSLLALPASQTSTNAFGNNNAAAGNNPFQGGGGGFSNNQGFGAAPQQ
QQQQQQQSQQQLQQQHQQSQVLASAANPFSNQLAPAPVGFVQSGGGGGAA
TGSGDGGWDPFTTTAAAAPQQPQQQQAGGGGAWDPFAPGPQSNGQQQQQA
PPPADDWGLGELTDADIWGNLPSKKETVEDESNWSDDDASEGSRDDGASR
STSLSGGGGGGRGGRGDRSGTKKNLRQEQEDLELALRLQREEEERASTPG
GGSGGSRGLSGIDRSMGASGGGREVAIRPRQAAGGKADGECFARISVRTL
LVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTR
LKRKVYKEHGYLWHFTLEEQMDYGPSIVAKFAHHERRVLEDLGQRLAEAI
REKRRLRQRFNQYGGSANHRGGSGGAGGFGGQGGGGRQPYSNGMNNGRRG
EYDEASHRTTHY*
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mRNA from alignment at Ecto-sp13_S_contig5700:656..8427-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5700.16079.1 ID=mRNA_Ecto-sp13_S_contig5700.16079.1|Name=mRNA_Ecto-sp13_S_contig5700.16079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7772bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5700:656..8427- (Ectocarpus species13 EcNAP12_S_4_19m)
GGTGCCGGTATGCAGGGAGGCCTCCAGCAGCAGGGAGGGATGCAGCAGCA
GGGAGGTATGCAGCAGCAGGGGATGGGAGGGGGGACCGGGTTTGGAGGGG
GGATGACCCAGCCGCAGCAGCAGCAGCCGCAGCAGCAGCAGCAGCAACAG
CCGTTTGGCGTGCAGCAGGGAGGGTCATCGCAGCAAGCTTTGGTCCCTTA
TGGCAGCCAAACTGGTGAGACGCACTGCCCTTGGCTATACCGGCACGGCA
TACTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCAGGT
TGTTTTTTTTTTTCAACAAGAGCTAGGCTAAACAGGGGCGGCAAGCTCCC
CCCCCCCCCCCTCCCTTCCAGCTGGAACCCTCAGGACAGTAGTTTTTTTT
TTTATCACTTTACAGCAGTGCACGCTGCTGCCTCAGGATTTCTTCCAGGT
GGGACCTCCAATCCGTTGTCGTAGGGTCTGGCCTCCCGAGGTTTTGGGTC
TGGCCGGCCTCATGTCCCCGAGCTCTACCACTCGGCCATGAACATGTAAC
AGCCAAAACCAGCGGCAGGAGTAGCCGCGGCAACGGCACTGATGTCGCAC
CTCCTTGGGTGATGTCGAGAAGCTGGGTCGTGTCGAGAGGCCTGGGTGGT
GTCCAGAAGCCTGGGTGGTGTCCAGAAAGGAGGCGGTCGTGCTTAGCGTG
TGTGGGAGTGCGTTGGGTTTATCCATGTGACAAGCGAGGGCAATAGCAAG
GGTAGACCATTCGACTCCTGATGGCGAAGGCGCCCCTGGTGATCGGTGTT
GGCGTGCGTTCGTCGGCGAAGCAGCAGCAGCATCGTCGTCGCAACCTTTT
TTGTCACGCTCAACGGACTAAAACGTTGACCCAACAACGCCACTGAAAGA
GCATCTCTCTGGGTGATCGCTTGCAAGCCGGAGAGGGGGGAATGTAGGAG
ACTAAGGACTCTACATAGCCGCCAACGATGGACGTGTGGTGCCCGGGGAA
TATGCCGGCGAACTGTTGTCGTTGCTGCGAATTCTACCGAGGTTCTACCA
ACTCGGGGTGTGAAGTGCAGCTTTTGCCTTCCGGGAAGGCCCTGCAAGCT
ATCGCTACCCACACACAATCTGTCCATACCTGAGTGCGACTGTTTGTGTT
GTTTGTGTGTTAATTTTCGGCGTGTTTGCGTACCCTCATTTGGGGAATGA
TTACGGGCTGTTTTCTGACGAGCTGGATTGGCTCGAAAGAGCGAGATAGC
AGAAAGGAGTATGGGAGCCGCACGTGACTGCCGTGGTGGGATGTGGACGA
GCGGGTGGATGTTTTCGTGTGTCTTGTGGGCGCGTTCCATCTCCGCTTGA
GCTCAGGTCTGCGCAAAGAACCAAAAACAATGGGCAGAAGAGAACCAACC
ATGAAGGAATCGATTCTTGAAGAATATATCCGCCCTACGATTCCTTCCTT
CCCTGATCCTCAATCAATCCCTGTTCACCGCCACACGCCAAACAGGCCAG
CCGCAACAACAGCAGCAGGGGGGGCTACTCGCCCTTGGACCATCGACTTC
TTCCTCCGACCCCTTCGCCCCGACCACTGCAGGCGGCGGCGGCGGCGGCG
GAAGCCTTCTCGCCCTCCCCGCGTCCCAGACGTCTACGAACGCCTTCGGC
AACAACAACGCGGCCGCCGGGAACAACCCCTTCCAGGGAGGAGGCGGGGG
TTTCAGCAACAACCAGGGGTTCGGCGCCGCTCCCCAGCAGCAGCAGCAGC
AGCAGCAGCAATCGCAGCAGCAGCTGCAGCAGCAGCACCAGCAGAGTCAG
GTCCTCGCGAGCGCGGCCAATCCGTTCTCGAACCAGCTGGCCCCGGCCCC
AGTTGGTTTTGTACAGAGCGGAGGCGGAGGCGGTGCGGCAACGGGCAGCG
GGGACGGCGGTTGGGACCCCTTCACCACCACAGCTGCGGCTGCGCCGCAG
CAGCCTCAGCAACAACAGGTACAACGGGGAGGCGTCAATAACTGCGGTTG
AGTAGCAGAGCGAGGTGAAAATGCTGGGCACAGGCTGAATCACCAAGTCG
TTCGGTACATTTAGGAGCCGCGGTCCCTCTGAATGGCGTCGGCCGAAGCG
CCGGGCGCGTGCTAGCGTTACTTAGGGCCAGCCACTGTAGGTGCAACAAG
CGTTTTTTTCTTTTTGTTTTCACACCCGTGTTTGTGGCGATTCCGTCATG
TGCTTGCACTACCGCCGATCTCGCTTTGCGCCCGCGTCGCGTGTCGGTTG
TGGGATGTTGCACTGTAGGTTTGTGGGTTTTGGCGGCCACACCGGCTGTA
TCATGCGCCTCTTCAGAAACTAGTTTTCGCTCAGAGGCATGCGTGAATGA
ATACTGCACGACGAGTGGTGCTCCTCGGAGTCACCCTCTCTCTTTTGCTT
AGTTTTAGAGAACATACATAAAATCGCACAAAGACTGCACGTTCGAGTGG
GATTCTGATTTGTTCAAAGCAGCAGCAGAAGGAATACAGACTTTTTTCAT
TTCTGCGGCAGATGGACAGACTCTTCGCCTTCTTGGGCTTTGTTGGTCTC
CGTAGATGTTCAAAAACAAGTGCTCATTTTTTTTGTCAGCGAGTTATGAT
GCGTACTGCTGTACTGCTGTACCAAGACGTGCTGTGGATAATCAGAAAGG
TGTACTGTTGCACGCTGCAAACCACGTAGCACCCTGTTGCATGCAGCAGA
TTACCGCGATGGATGATAACGCTCCCATCCTATGATCAACGCTTATCTAT
ACCACGTTGCATCAACACAGCCGTAGCAAGCAGCCAACCCATCCCCTTCG
ACGACCTTTTTATGATTTCGAAGGGTTATTCACTCACATCCCCCCCCCCC
TCTCCTCTTGGTTGTTTAGGCCGGCGGTGGAGGAGCTTGGGACCCTTTTG
CGCCCGGCCCTCAGTCTAACGGCCAGCAGCAGCAGCAGGCCCCGCCCCCG
GCGGATGACTGGGGTCTGGGTGAGCTGACGGACGCCGACATCTGGGGCAA
CCTCCCCTCCAAAAAGGAGACGGTGCGTCCGTTTTGCATTTGCTACTCGC
TGCAGCTGCTGCTGCTGCGGTTGTTGCAGCTGCTACAGCTACTGCATCTT
TTTTTTTGTGTGTTCGTGCCGTAGATACTTCTTGTTGCTTGTGTTTTTGC
TTGATGTTTCCCGGCCCGTGATTTAGCGTTTATTTCCTCTCTGCTTGTCT
TTTTTCTTTTTTGTCAGAACCGTTGGCGGCGCTTATTACGTGTGTGCATG
TGGGTGTTGTGATGTGTTGGCATCGACAACGAGCTGGTCGAGGAAAATGC
TTCGTTTCAGTGACGCTAAAAACAGATATGCTTTGAAAGGCCATGATCTG
GGACCCCGTGAGGGAGCGTCATCGGGGAGGTTACGCTTTTCTCCGGGTTA
CTGACAGAGACGGTAGCAACAGAGGAAACTGGACGTGTTAACCATGGCTG
CTTCTTTTGCGCTCTTTTTCATTTCGGACCCTGCCGCTTGTTGCTGCTTT
CTTCACCCTCCTTGCATTCACCACTTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTCTGTGTGTTTCTTAGATGTTACCATCGACCGCGGTATGAGCG
GCTGGCCAACCAAGAGTCGTCAGTCTCAGTGCGGCTAAAAACCACGAAAC
GCTTCCAGAGGTCATGATCTCGGACCCCGCCAGTGTTGTATTTTTTTTTG
GTTTGCATCGACGACGCCAACTGGCTGACGAATGAAAATACGTCATGCTC
AGTACAGATATGTGTTGTTGTTGTTGTGGTTGTGGTTGTCTTCTCCTTGA
AAACCGTTCCGATCTCTCTACACAGCAGTACCTTGATCTACGTTTTTTAC
ACATAAATTTGTTGGAGTAGGTGGAAGACGAGAGCAACTGGTCCGACGAC
GACGCGAGCGAGGGGTCCCGTGACGACGGCGCTTCAAGATCCACCAGCCT
CAGCGGCGGAGGAGGCGGGGGTCGCGGGGGGAGAGGGGACCGGTCCGGTA
CGAAGAAGAACCTCCGGTAAGACACCTGTTCTTTTTTTATCATTGTTGTT
GTTGTCTTGAAATGTAGAACCGTTCCGGATTTTGCTCAATTCCCTCTGAG
GATATCCATACGGGTCCACCTGAGGCGGACGCCTTCCACGGTCACAGGGT
AACACGGTACACATTTCTAGAAATTTAGCGACGAAATATTACATGGACTC
AGTTGCTTTCCGCTTCTTTTTTTCTGGAATCCTTGTGGGTGAGAGGGTTG
TTGCTGCACCCTACGGGCGGGGAAGACTGGATAGCGGTGTCCATGGAGAT
AAGTCTCCTGTTATAGCAAGGTCAACTAATAACCTTCAATGCCCTGAGCA
ATCTCACCTTCTTTTTCGGAATTTTTGGTTCGGTAGAAAAGACCAGCCCG
CTTTTCTCCCCTCACAATTTCATGGCTCGTTGGGTTTCCAGGCAAGAACA
GGAAGACCTGGAGCTTGCGTTGCGCCTGCAGCGTGAGGAGGAGGAGCGCG
CGTCGACCCCTGTGAGTGTCCCGACCATGACCGTGCATAGGTTGCGTAGG
AAATATCACCATCAAAAGGTTGACTACTATTTCCACGACCAAGGGGATGC
CAGCATCAAATGGTGCTCGTTCGGAAAGCTCTCGACGAAGCATCGCTGTT
TCTACTTGCAGGATAATCGAGCTCTGAACATCGGAGTGTTAGGTACCTCG
CGTATGAAACGTACGGTATGCCGGAACGACGCCTTTGGTCGGAGGAGCGA
GGCAACGCGAACAAATGCCATCCCGGAAGGGCCGAGGAGGGTCTAGCGAT
AGCTCCCACGGCAGTTGCGGAACGAGAACCTTGCTTTTGTCGACAACAGT
TGAACGGTGGAACAACTTCCACAAATGGTGTGTGACGCTTCTGCTAGGGC
TGGGAACGGTAGCGAGTTTGACCTCGAGGGGGGTAGTGACGCCGCGTAAC
CCTCTTCGATGTTCGTGCATCGACTTGATAGCCTCGCTCCCCCCGTCCCG
GCAGTATATTCTGACCAGCATCTTTTGCCATCTCCTGTCACCCTCCTTCT
ATTCTCTCCCGTGCGACAATAGTATTCGATCAAACCAGGCCTAACCCAAA
CCCCCACTCCCCTATCCGGTCCAGACACAACATTGAGAGCGCACCCCACT
GACGAACATGATCCAGACATGTTTTTGAGAGCACTCCCCCCCCCCCCCCC
TCCCCCCCCCTGCCGAAACGAATCCAACCATTTTTTTTAGAGCCCCCCCC
CCCCCCCCCCTCCTCCTCCCCCGTGCCCCCCCCCCCCACCTTCTGGCCGT
CGATGGCGTTGGTATGCAGGGAGGGGGCAGCGGTGGTAGCCGAGGACTGT
CTGGCATCGATCGGTCAATGGGAGCATCCGGCGGCGGCAGGTAAATTGTT
TTATTAGTTAATCACTATCAATCATCGCTCACAGCATTTCTGCCGTACGA
CCGACACAACCTACAAGTTTATTCCGCATGCAAATATCCCTCCTTAGTGA
GCTCATCATGAGGGCACAATCATCAAAGGGGTAGTGGTAAACGACGAAAC
AGGAAAGACGGGGCCGCAACAAGCTGCCAGTCGAGACGTTTCCCGAGCTG
AACAGTCCACAACAGCTGATGTGTTTTTTTCTCGAGGAGCCCAGCGAACC
TCAACGAGTGGAAACTACATCATTGTGTTGTAGTTGGCAAGCAGCATGGT
AGGATTCTTGGCCCGATAGGGATGCCGTCGAGTCTTGCGGGTTGTGATCT
CCGGGGGTCGCGCAGACTTGATGGTTGGAGTCATTTGGCGGGGTGGTTGC
TCAAAGCCCCGTGCGTGCCTAGTCTTGTTTTTTCGTGTTGCTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTACGGTTGCTGTTGTTGTTGTTG
TTGTTGCTGTGTCGGTCAAGCCCCCACCGTCTTCTCGAAAGGTCAGGGAA
TCGGCCAATCAGCCTTGCGGAGCTTGCGCGTGTAGAGGCGTTTGGTGTTG
TTGGCCGAGTGCCGCGTTTTTTTGCCTGGACACCGCTTGTTCGCCCCTTC
TGACGGCACCCGCCCTCTGGAGTCTTTTGCCGTACTCAATTTATCGTCTG
CACAGCCGCGTGTAGCGGGGTTCTGTCGGGGCAGACTGCTGTTTCGAAGA
GTACTTGTCGGCGACGGCGGTGGCGGGTGGAGCGTTGCCCGCATCGCAGT
GCCGCGCTTAGCACAACCTCCATGATTTCCCTTGTGCAACCAACAGGGAG
GTGGCCATAAGGCCGCGGCAGGCGGCCGGCGGCAAGGCGGACGGGGAGTG
CTTCGCCCGCATCTCGGTGCGCACTCTCCTGGTGAAGAAGTGGAAGACGA
CGTACTTCATCTTCGAGCTGCCGGACCTTCTCCTGCTCTACCGCTCGCGA
GACGACCACATGTACAACCCCAGGGGGACGATGATCAAGAAGCGCGTGGA
GGTCAAGCACAACCACACGCTCACGCGCCTCAAGCGGAAGGTGGGGGTTG
ACGCTGATTGCAGGAGGAGGAGGGGTGTTGACTATCCTTCGGGGCAACGG
ATTTATTTTTTTTTCGTATGAAGTTCTTAAATTGGCAATAACCGCGGTAA
CCGGCTGACCAAGGAAAACACGTCTGTTTCACAGCTGACTGAAAAACGCG
AACGCCCTTTCAACCTACAGAGGAACGCAAGAGTGTGGTACTTGTGACGC
GAAAGGTTCTCAACCTACGGCGGAACGCAAGAGTGTGGTACTTGTGTTTA
GTTGTTTCTCCAGGTTGTTTCCAGTGTTGGTTGTTTTTTGTGTGGTTGCA
CTTCTTGTTACGCACGCCGCACGATACGTCGAACTTATTTGTTTCTTCCA
CCTCTGCTGGCTCGCCTTCGTCTTTGTGCCGTTTCGGTCCTTTCGTCGTC
ACGTACGCCGCAGGTGTACAAGGAGCACGGTTACCTCTGGCACTTCACCC
TGGAGGAGCAGATGGACTACGGGCCTAGCATCGTGGCCAAGTTCGCGCAT
CACGAGCGCCGGGTGCTGGAGGACCTCGGCCAGAGGGTGAGTGTTCAAGT
TCAATTGAGAGAGAGAGGGGGAACGACACGTGTGCCTGGCTGTAAGAGAA
AGTGGAGGGTGTTTTGTATCTTTTTTGCGTCGCCCGCTATCAGGCTGCCC
GATGAACGTACGTCACTGCGTGTTTATCTTTGAATTTCATCAACCGCGCT
AGCGGGGTTGACCAATCAGAGCCGTCGGTTTGTGGTCCAAAACGCGTGCC
GTGCCTCTTCGTCGGGAGCACCCTAACCGAACCGTTCAAATATTTCGGGA
TATAGGGAGGGTGGGGACCTTGGCATTGGTGGTGGGAAGGGTGATGTTGT
AGTTCCTCCCGCCGAAGCCGAGGGGAGTGACCCGCGCTCTCTCCGGGAGC
ATACCGTACGAGATACAAGTTGGCGTTCTCCTACACCCGACATGCCACCC
CGTTCCCCCAGAAGAAAGTCTTGCGCGCGATGTGATTCTCCCGGAATCGA
TACGAATCAGTGTTCCCAAAGTCTCATCCACGCCTCCTCGTCCTCTTATC
CCAAACCCCACAAAACAGTTGGCCGAAGCCATCCGAGAGAAGCGGCGTCT
GCGCCAGCGCTTCAACCAGTACGGTGGCTCTGCGAACCACCGCGGCGGTA
GCGGTGGCGCCGGAGGCTTCGGCGGGCAGGGGGGCGGGGGGCGTCAGCCG
TACAGCAACGGCATGAACAACGGCCGTCGCGGAGAATACGATGAGGCGAG
TCACAGGACGACTCATTACTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5700:656..8427-

>mRNA_Ecto-sp13_S_contig5700.16079.1 ID=mRNA_Ecto-sp13_S_contig5700.16079.1|Name=mRNA_Ecto-sp13_S_contig5700.16079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1689bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5700:656..8427- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGGGAGGCCTCCAGCAGCAGGGAGGGATGCAGCAGCAGGGAGGTAT
GCAGCAGCAGGGGATGGGAGGGGGGACCGGGTTTGGAGGGGGGATGACCC
AGCCGCAGCAGCAGCAGCCGCAGCAGCAGCAGCAGCAACAGCCGTTTGGC
GTGCAGCAGGGAGGGTCATCGCAGCAAGCTTTGGTCCCTTATGGCAGCCA
AACTGGCCAGCCGCAACAACAGCAGCAGGGGGGGCTACTCGCCCTTGGAC
CATCGACTTCTTCCTCCGACCCCTTCGCCCCGACCACTGCAGGCGGCGGC
GGCGGCGGCGGAAGCCTTCTCGCCCTCCCCGCGTCCCAGACGTCTACGAA
CGCCTTCGGCAACAACAACGCGGCCGCCGGGAACAACCCCTTCCAGGGAG
GAGGCGGGGGTTTCAGCAACAACCAGGGGTTCGGCGCCGCTCCCCAGCAG
CAGCAGCAGCAGCAGCAGCAATCGCAGCAGCAGCTGCAGCAGCAGCACCA
GCAGAGTCAGGTCCTCGCGAGCGCGGCCAATCCGTTCTCGAACCAGCTGG
CCCCGGCCCCAGTTGGTTTTGTACAGAGCGGAGGCGGAGGCGGTGCGGCA
ACGGGCAGCGGGGACGGCGGTTGGGACCCCTTCACCACCACAGCTGCGGC
TGCGCCGCAGCAGCCTCAGCAACAACAGGCCGGCGGTGGAGGAGCTTGGG
ACCCTTTTGCGCCCGGCCCTCAGTCTAACGGCCAGCAGCAGCAGCAGGCC
CCGCCCCCGGCGGATGACTGGGGTCTGGGTGAGCTGACGGACGCCGACAT
CTGGGGCAACCTCCCCTCCAAAAAGGAGACGGTGGAAGACGAGAGCAACT
GGTCCGACGACGACGCGAGCGAGGGGTCCCGTGACGACGGCGCTTCAAGA
TCCACCAGCCTCAGCGGCGGAGGAGGCGGGGGTCGCGGGGGGAGAGGGGA
CCGGTCCGGTACGAAGAAGAACCTCCGGCAAGAACAGGAAGACCTGGAGC
TTGCGTTGCGCCTGCAGCGTGAGGAGGAGGAGCGCGCGTCGACCCCTGGA
GGGGGCAGCGGTGGTAGCCGAGGACTGTCTGGCATCGATCGGTCAATGGG
AGCATCCGGCGGCGGCAGGGAGGTGGCCATAAGGCCGCGGCAGGCGGCCG
GCGGCAAGGCGGACGGGGAGTGCTTCGCCCGCATCTCGGTGCGCACTCTC
CTGGTGAAGAAGTGGAAGACGACGTACTTCATCTTCGAGCTGCCGGACCT
TCTCCTGCTCTACCGCTCGCGAGACGACCACATGTACAACCCCAGGGGGA
CGATGATCAAGAAGCGCGTGGAGGTCAAGCACAACCACACGCTCACGCGC
CTCAAGCGGAAGGTGTACAAGGAGCACGGTTACCTCTGGCACTTCACCCT
GGAGGAGCAGATGGACTACGGGCCTAGCATCGTGGCCAAGTTCGCGCATC
ACGAGCGCCGGGTGCTGGAGGACCTCGGCCAGAGGTTGGCCGAAGCCATC
CGAGAGAAGCGGCGTCTGCGCCAGCGCTTCAACCAGTACGGTGGCTCTGC
GAACCACCGCGGCGGTAGCGGTGGCGCCGGAGGCTTCGGCGGGCAGGGGG
GCGGGGGGCGTCAGCCGTACAGCAACGGCATGAACAACGGCCGTCGCGGA
GAATACGATGAGGCGAGTCACAGGACGACTCATTACTGA
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