mRNA_Ecto-sp13_S_contig5680.16047.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5680.16047.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 184 bits (467), Expect = 4.330e-53 Identity = 100/148 (67.57%), Postives = 110/148 (74.32%), Query Frame = 1
Query: 4 GQTRCLEAFVIALSQACEGGKKRWYALTLELQLTSLDICGAYRSMSIVDVRVDDQTPTSLWSPREVQARTNTPSSKVRTSSRVPVVQALRLEWARAMEILRRGAAIELWKSSEYLELLGSLGAASLRSVVWPPGLTQLVLDAEFDIPI 447
G TR +AF IALSQACEGG+KRWY T ELQL SLDIC A RS + VRV TPTSLWSP VQA NT SSKVR SRVPVV+ALRL WA +ME L + AAIELW SE LE++G L AASL SVVWP GLTQLVLD +F IP+
Sbjct: 5 GYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDFHIPM 152
BLAST of mRNA_Ecto-sp13_S_contig5680.16047.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 184 bits (466), Expect = 3.440e-48 Identity = 102/151 (67.55%), Postives = 114/151 (75.50%), Query Frame = 1
Query: 7 QTRCLEAFVIALSQACEGGKKRWYALTLELQLTSLDICGAYRSMSIVDVRVDDQTPTSLWSPREVQARTNTPSSKVRTSSRVPVVQALRLEWARAMEILRRGAAIELWKSSEYLELLGSLGAASLRS-VVWPPGLTQLVLDAEFDIPIRDV 456
+TRCL+AFVIALSQACEGG+KRWYA TLELQLTSLD+C A R+ SI+ V VDDQTP SLWS R Q R NT S + SSRVPVV+ALRL WA +ME L R AAIELW SE LELLGS +SL S VVWP GLTQLVL + DI + V
Sbjct: 8 RTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIAMGTV 158
BLAST of mRNA_Ecto-sp13_S_contig5680.16047.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 147 bits (372), Expect = 7.440e-35 Identity = 81/168 (48.21%), Postives = 105/168 (62.50%), Query Frame = 1
Query: 4 GQTRCLEAFVIALSQACEGGKKRWYALTLELQLTSLDICGAYRSMSIVDVRVDDQTPTSLWSPREVQARTNTPSSKVRTSSRVPVVQALRLEWARAMEILRRGAAIELWKSSEYLELLGSLGAASLRSVVWPPGLTQLVLDAEFDIPIRDVSWPARLQRLVL-FAFNQ 504
G ++CL+AFV+AL+QAC+G +KRWY TLELQL SL++CGA R + + VRV QTP SLW P + TN S KV SSRVPVVQA L WA M +L++ +A E+ S AASL S VWP L ++V ++ D+ + SWPA LQ+L FNQ
Sbjct: 5 GNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFES--DMTVNTASWPASLQQLSFGCGFNQ 170
BLAST of mRNA_Ecto-sp13_S_contig5680.16047.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 142 bits (357), Expect = 2.180e-34 Identity = 78/162 (48.15%), Postives = 103/162 (63.58%), Query Frame = 1
Query: 4 GQTRCLEAFVIALSQACEGGKKRWYALTLELQLTSLDICGAYRSMSIVDVRVDDQTPTSLWSPREVQARTNTPSSKVRTSSRVPVVQALRLEWARAMEILRRGAAIELWKSSEYLELLGSLGAASLRSVVW-PPGLTQLVLDAEFDIPIRDVSWPARLQRLV 486
G++ CL AF++AL+Q C G +KRWYA TLELQL SL+ CGA R + + VRVD QTP SLWSP + A T S + S+RVP VQA L WA ME+L + +A+EL S+Y + G+ ASL S+ W L +LV D+ D+P SWPA L +L+
Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDS--DMPASTASWPASLPQLL 172
BLAST of mRNA_Ecto-sp13_S_contig5680.16047.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 142 bits (359), Expect = 2.540e-34 Identity = 80/160 (50.00%), Postives = 101/160 (63.12%), Query Frame = 1
Query: 7 QTRCLEAFVIALSQACEGGKKRWYALTLELQLTSLDICGAYRSMSIVDVRVDDQTPTSLWSPREVQARTNTPSSKVRTSSRVPVVQALRLEWARAMEILRRGAAIELWKSSEYLELLGSLGAASLRSVVWPPGLTQLVLDAE-FDIPIRDVSWPARLQRL 483
Q RCL+AFV+ALSQ EGG+KRWY TL+LQL SL+ CGA RS ++ V VD +TP +LWS + TS+RVP VQA+ L WAR E A+ ELW E L+L SL A+L SVVWP GL +LV+D F IP+ +SWP+ L+ L
Sbjct: 6 QRRCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLGQANPTAG-------TSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVMDCTVFIIPLEMMSWPSSLKSL 158
BLAST of mRNA_Ecto-sp13_S_contig5680.16047.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 127 bits (320), Expect = 1.850e-28 Identity = 76/176 (43.18%), Postives = 94/176 (53.41%), Query Frame = 1
Query: 4 GQTRCLEAFVIALSQACEGGKKRWYALTLELQLTSLDICGAYRSMSIVDVRVDDQTPTSLWSPREVQARTNTPSSKVRT----------------------------SSRVPVVQALRLEWARAMEILRRGAAIELWKSSEYLELLGSLGAASLRSVVWPPGLTQLVLDAEFDIPI 447
G +R +A +IA+SQA EG KRWY TLEL+L SL+ C A R + + VRVD TP SLWSP + R +T SSK R SSRVPV QAL L WA EIL +G A+ELW E+L+L SL + L SV WP L +L L+ F+ I
Sbjct: 5 GASRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVSVAWPQNLKRLALETGFEAAI 180
BLAST of mRNA_Ecto-sp13_S_contig5680.16047.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 125 bits (315), Expect = 1.190e-27 Identity = 78/170 (45.88%), Postives = 97/170 (57.06%), Query Frame = 1
Query: 1 LGQTRCLEAFVIALSQACEGGKKRWYALTLELQLTSLDICGAYRSMSIVDVRVDDQTPTSLWSPREVQARTNTPSSKVRTSSRVPVVQALRLEWARAMEILRRGAAIELWKSSEYLELLGSLGAASLRSVVWPPGLTQLVLDAEFDIPIRDVSWPARLQRLVLFAF-NQP 507
LG++ CL+AF++AL QA +G KRWY TLELQL SL+ CGA RS DV++ QTP SLWSPR+ S + SRVP VQA WA MEIL +A EL + SE + G A S + W LT+L+ +E + VSWPA LQ L F NQP
Sbjct: 24 LGRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYSERSV--NSVSWPACLQELSFGDFFNQP 191
BLAST of mRNA_Ecto-sp13_S_contig5680.16047.1 vs. uniprot
Match: A0A6H5KVM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM8_9PHAE) HSP 1 Score: 108 bits (269), Expect = 5.890e-25 Identity = 57/87 (65.52%), Postives = 64/87 (73.56%), Query Frame = 1
Query: 1 LGQTRCLEAFVIALSQACEGGKKRWYALTLELQLTSLDICGAYRSMSIVDVRVDDQTPTSLWSPREVQARTNTPSSKVRTSSRVPVV 261
LG T+C +AFV+ALSQACEGG KR Y TLEL L SLDIC A RS S + VRV QTP S WSP +VQ R + SSK+R SSRVPVV
Sbjct: 17 LGPTQCFDAFVVALSQACEGGNKRSYTSTLELPLASLDICRAGRSTSTLHVRVQYQTPRSFWSPPKVQLRPDEGSSKIRLSSRVPVV 103
BLAST of mRNA_Ecto-sp13_S_contig5680.16047.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 112 bits (280), Expect = 6.380e-25 Identity = 66/148 (44.59%), Postives = 89/148 (60.14%), Query Frame = 1
Query: 19 LEAFVIALSQACEGGKKRWYALTLELQLTSLDICGAYRSMSIVDVRVDDQTPTSLWSPREVQARTNTPSSKVRTSSRVPVVQALRLEWARAMEILRRGAAIELWKSSEYLELLGSLGAASLRSVVWPPGLTQLVLDAEFDIPIRDVSW 462
L+ ++AL+QAC+G +KRWY TLELQL SL++CGA RS ++ V V + TP +LWS R + + S +V TS+RVP VQAL WA M+ L + AA E +E G AAS+ SVVWP L +LV +P + V W
Sbjct: 90 LDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLVFSRR--MPGKAVWW 235
BLAST of mRNA_Ecto-sp13_S_contig5680.16047.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 6.140e-18 Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 1
Query: 7 QTRCLEAFVIALSQACEGGKKRWYALTLELQLTSLDICGAYRSMSIVDVRVDDQTPTSLWSPREVQARTNTPSSKV 234
+++CL+AFV+AL+Q C+G +KRWYA TLELQL SL+ CGA R + + VRVD +TP SLWSPR + S KV
Sbjct: 38 RSKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTTPITAHKRSRKV 113 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5680.16047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5680.16047.1 >prot_Ecto-sp13_S_contig5680.16047.1 ID=prot_Ecto-sp13_S_contig5680.16047.1|Name=mRNA_Ecto-sp13_S_contig5680.16047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=445bp LGQTRCLEAFVIALSQACEGGKKRWYALTLELQLTSLDICGAYRSMSIVDback to top mRNA from alignment at Ecto-sp13_S_contig5680:7067..8402+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5680.16047.1 ID=mRNA_Ecto-sp13_S_contig5680.16047.1|Name=mRNA_Ecto-sp13_S_contig5680.16047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1336bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5680:7067..8402+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5680:7067..8402+ >mRNA_Ecto-sp13_S_contig5680.16047.1 ID=mRNA_Ecto-sp13_S_contig5680.16047.1|Name=mRNA_Ecto-sp13_S_contig5680.16047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1335bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5680:7067..8402+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |