mRNA_Ecto-sp13_S_contig56733.16035.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig56733.16035.1
Unique NamemRNA_Ecto-sp13_S_contig56733.16035.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig56733.16035.1 vs. uniprot
Match: D7FHZ1_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ1_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 1.960e-28
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 1 
Query:    7 QEEGLTPTEIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHFE 147
            +EEGLTPTEIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHFE
Sbjct:   33 KEEGLTPTEIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHFE 79
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BLAST of mRNA_Ecto-sp13_S_contig56733.16035.1 vs. uniprot
Match: A0A835Z9U1_9STRA (Alpha-tubulin N-acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9U1_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.660e-12
Identity = 27/46 (58.70%), Postives = 37/46 (80.43%), Query Frame = 1 
Query:    7 QEEGLTPTEIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHF 144
            + E +T  ++AYDRPSPKL+PFL +H+GL   +DQPNRFMVF ++F
Sbjct:  132 KSENVTAEQLAYDRPSPKLRPFLKRHYGLAQGIDQPNRFMVFPQYF 177
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BLAST of mRNA_Ecto-sp13_S_contig56733.16035.1 vs. uniprot
Match: V9F716_PHYPR (Alpha-tubulin N-acetyltransferase n=10 Tax=Phytophthora TaxID=4783 RepID=V9F716_PHYPR)

HSP 1 Score: 61.2 bits (147), Expect = 2.440e-10
Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 1 
Query:    7 QEEGLTPTEIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHFE 147
            +EE +TP ++AYDRPSPKL  FL KH GL     QPNRF++F  +F+
Sbjct:  121 REENITPAQLAYDRPSPKLFAFLKKHAGLTEYFPQPNRFVIFDAYFQ 167
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BLAST of mRNA_Ecto-sp13_S_contig56733.16035.1 vs. uniprot
Match: A0A6A4CQA2_9STRA (Alpha-tubulin N-acetyltransferase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CQA2_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 4.520e-10
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 1 
Query:    7 QEEGLTPTEIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHFE 147
            Q+E +TP ++AYDRPSPKL  FL KH GL     QPNRF+VF  +F+
Sbjct:  117 QDEHVTPAQLAYDRPSPKLFAFLKKHAGLTEHFPQPNRFIVFDAYFQ 163
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BLAST of mRNA_Ecto-sp13_S_contig56733.16035.1 vs. uniprot
Match: G4ZVG2_PHYSP (Alpha-tubulin N-acetyltransferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZVG2_PHYSP)

HSP 1 Score: 60.5 bits (145), Expect = 4.520e-10
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 1 
Query:    7 QEEGLTPTEIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHFE 147
            Q+E +TP ++AYDRPSPKL  FL KH GL     QPNRF+VF  +F+
Sbjct:  117 QDEQVTPAQLAYDRPSPKLFAFLKKHAGLTEHFPQPNRFVVFDAYFQ 163
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BLAST of mRNA_Ecto-sp13_S_contig56733.16035.1 vs. uniprot
Match: A0A7S2N6H0_9EUKA (Alpha-tubulin N-acetyltransferase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N6H0_9EUKA)

HSP 1 Score: 60.8 bits (146), Expect = 7.420e-10
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 1 
Query:    7 QEEGLTPTEIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHFE 147
            Q EG+ P++IAYDRPSPKL  F+ KHFGL +   Q N+F++F E+F+
Sbjct:  155 QNEGVHPSKIAYDRPSPKLIGFMRKHFGLADYQPQQNKFVIFNEYFD 201
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BLAST of mRNA_Ecto-sp13_S_contig56733.16035.1 vs. uniprot
Match: A0A482V4D6_9ARCH (GNAT family N-acetyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V4D6_9ARCH)

HSP 1 Score: 56.6 bits (135), Expect = 1.090e-9
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 1 
Query:   16 GLTPTEIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHF 144
            G +P ++AYDRPSPKL PFL KH+ LH    QPNR+ +F + F
Sbjct:    3 GASPGQVAYDRPSPKLIPFLHKHYDLHQPDLQPNRYTIFPKQF 45
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BLAST of mRNA_Ecto-sp13_S_contig56733.16035.1 vs. uniprot
Match: A0A8J2WPF3_9STRA (Alpha-tubulin N-acetyltransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WPF3_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.750e-9
Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 1 
Query:   13 EGLTPTEIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHFE 147
            EG     +AYDRPSPK+ PFL KH+GL +  +QPN F+VF ++FE
Sbjct:  139 EGREARSLAYDRPSPKMLPFLRKHYGLQDYNEQPNNFVVFDDYFE 183
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BLAST of mRNA_Ecto-sp13_S_contig56733.16035.1 vs. uniprot
Match: A0A485LT96_9STRA (Alpha-tubulin N-acetyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LT96_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.140e-9
Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 1 
Query:   34 IAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHF 144
            +AYDRPSPKL PFL KHFGL + +DQPNR++VF  +F
Sbjct:  139 LAYDRPSPKLLPFLRKHFGLTDHVDQPNRYVVFDAYF 175
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BLAST of mRNA_Ecto-sp13_S_contig56733.16035.1 vs. uniprot
Match: A0A8J4F112_9CHLO (Alpha-tubulin N-acetyltransferase n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F112_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 3.890e-9
Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 1 
Query:    1 FRQEEGLTPTEIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHFE 147
            F   EG  P  +AYDRPSPKL  FLGKH+GL   + Q N ++VF  +F+
Sbjct:  132 FLNTEGCDPASLAYDRPSPKLLAFLGKHYGLQEHVPQSNNYVVFNRYFD 180
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56733.16035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHZ1_ECTSI1.960e-2897.87N-acetyltransferase domain-containing protein n=1 ... [more]
A0A835Z9U1_9STRA2.660e-1258.70Alpha-tubulin N-acetyltransferase n=1 Tax=Tribonem... [more]
V9F716_PHYPR2.440e-1055.32Alpha-tubulin N-acetyltransferase n=10 Tax=Phytoph... [more]
A0A6A4CQA2_9STRA4.520e-1057.45Alpha-tubulin N-acetyltransferase n=4 Tax=Phytopht... [more]
G4ZVG2_PHYSP4.520e-1057.45Alpha-tubulin N-acetyltransferase n=1 Tax=Phytopht... [more]
A0A7S2N6H0_9EUKA7.420e-1055.32Alpha-tubulin N-acetyltransferase n=1 Tax=Haptolin... [more]
A0A482V4D6_9ARCH1.090e-955.81GNAT family N-acetyltransferase n=1 Tax=archaeon T... [more]
A0A8J2WPF3_9STRA1.750e-955.56Alpha-tubulin N-acetyltransferase n=1 Tax=Pelagomo... [more]
A0A485LT96_9STRA2.140e-967.57Alpha-tubulin N-acetyltransferase n=1 Tax=Aphanomy... [more]
A0A8J4F112_9CHLO3.890e-951.02Alpha-tubulin N-acetyltransferase n=1 Tax=Volvox a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig56733contigEcto-sp13_S_contig56733:195..341 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score104.8
Seed ortholog evalue1.2e-20
Seed eggNOG ortholog2880.D7FHZ1
Model size147
KEGG koko:K19573
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0019799,GO:0032886,GO:0033043,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0051128,GO:0051493,GO:0061733,GO:0065007,GO:0070507,GO:0071704,GO:0071929,GO:1901564
Exons1
EggNOG free text desc.alpha-tubulin acetylation
EggNOG OGsKOG4601@1,KOG4601@2759
EC2.3.1.108
Cds size147
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463785.3929143-CDS-Ecto-sp13_S_contig56733:194..3411681463785.3929143-CDS-Ecto-sp13_S_contig56733:194..341Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig56733 195..341 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig56733.16035.1prot_Ecto-sp13_S_contig56733.16035.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig56733 195..341 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig56733.16035.1

>prot_Ecto-sp13_S_contig56733.16035.1 ID=prot_Ecto-sp13_S_contig56733.16035.1|Name=mRNA_Ecto-sp13_S_contig56733.16035.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=49bp
FRQEEGLTPTEIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHFE
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mRNA from alignment at Ecto-sp13_S_contig56733:195..341+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig56733.16035.1 ID=mRNA_Ecto-sp13_S_contig56733.16035.1|Name=mRNA_Ecto-sp13_S_contig56733.16035.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=147bp|location=Sequence derived from alignment at Ecto-sp13_S_contig56733:195..341+ (Ectocarpus species13 EcNAP12_S_4_19m)
TTTCGACAGGAGGAAGGGCTAACGCCAACGGAAATCGCGTACGACAGGCC
GTCCCCGAAGCTGAAGCCCTTCCTCGGGAAGCACTTCGGGCTTCACAATT
GTTTGGACCAGCCCAACCGCTTCATGGTGTTCAAAGAGCACTTCGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig56733:195..341+

>mRNA_Ecto-sp13_S_contig56733.16035.1 ID=mRNA_Ecto-sp13_S_contig56733.16035.1|Name=mRNA_Ecto-sp13_S_contig56733.16035.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=147bp|location=Sequence derived from alignment at Ecto-sp13_S_contig56733:195..341+ (Ectocarpus species13 EcNAP12_S_4_19m)
TTTCGACAGGAGGAAGGGCTAACGCCAACGGAAATCGCGTACGACAGGCC
GTCCCCGAAGCTGAAGCCCTTCCTCGGGAAGCACTTCGGGCTTCACAATT
GTTTGGACCAGCCCAACCGCTTCATGGTGTTCAAAGAGCACTTCGAG
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