mRNA_Ecto-sp13_S_contig56730.16034.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig56730.16034.1 vs. uniprot
Match: D8LAV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV0_ECTSI) HSP 1 Score: 160 bits (405), Expect = 1.600e-48 Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 3
Query: 3 EVEEFGSGGTAFLSTPSIYFSLDKDLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIPETLRGTFDMVVVDPPFVTRQV 236
EV EFGSGGTAFLSTPSIYFSLD+DLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIPETLRGTFDMVVVDPPFVTRQV
Sbjct: 37 EVGEFGSGGTAFLSTPSIYFSLDRDLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIPETLRGTFDMVVVDPPFVTRQV 114
BLAST of mRNA_Ecto-sp13_S_contig56730.16034.1 vs. uniprot
Match: A0A835YKM7_9STRA (Putative N6-adenine methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKM7_9STRA) HSP 1 Score: 114 bits (284), Expect = 3.430e-30 Identity = 51/78 (65.38%), Postives = 60/78 (76.92%), Query Frame = 3
Query: 3 EVEEFGSGGTAFLSTPSIYFSLDKDLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIPETLRGTFDMVVVDPPFVTRQV 236
EV EFG GTAFLSTPSIYFS ++R KCKVFD+DT W KDPGFV +D+ K D+P L GTF MVV+DPPF+ R+V
Sbjct: 33 EVVEFGGEGTAFLSTPSIYFSTPAEIRQKCKVFDIDTAWKKDPGFVYFDFNKLDDVPADLHGTFAMVVIDPPFIMREV 110
BLAST of mRNA_Ecto-sp13_S_contig56730.16034.1 vs. uniprot
Match: A0A8J8NP72_HALGN (Uncharacterized protein n=2 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NP72_HALGN) HSP 1 Score: 102 bits (255), Expect = 7.370e-26 Identity = 50/79 (63.29%), Postives = 62/79 (78.48%), Query Frame = 3
Query: 3 EVEEFGSGGTAFLSTPSIYFSL-DKDLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIPETLRGTFDMVVVDPPFVTRQV 236
E E+FG AFLSTPSIYFSL +K+++A +VFD DTK+ KDPGFV YD+ KP+DIP L FDMVV+DPPF+TR+V
Sbjct: 33 ECEQFGQK-IAFLSTPSIYFSLKNKEIKAASRVFDFDTKFNKDPGFVFYDFNKPEDIPADLHNYFDMVVIDPPFITREV 110
BLAST of mRNA_Ecto-sp13_S_contig56730.16034.1 vs. uniprot
Match: A0A812ZQJ4_9DINO (EEF1AKMT1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZQJ4_9DINO) HSP 1 Score: 103 bits (256), Expect = 9.830e-26 Identity = 46/69 (66.67%), Postives = 53/69 (76.81%), Query Frame = 3
Query: 30 TAFLSTPSIYFSLDKDLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIPETLRGTFDMVVVDPPFVTRQV 236
TAFLSTPSIYF L K+LRAKC VFD D +W DPGFV YD+ P + PE L TFD VV+DPPF+TR+V
Sbjct: 42 TAFLSTPSIYFCLPKELRAKCMVFDFDKQWKDDPGFVFYDFNDPTEFPEELLHTFDAVVIDPPFITREV 110
BLAST of mRNA_Ecto-sp13_S_contig56730.16034.1 vs. uniprot
Match: A0A7S1G4D1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4D1_9STRA) HSP 1 Score: 101 bits (251), Expect = 4.810e-25 Identity = 48/77 (62.34%), Postives = 59/77 (76.62%), Query Frame = 3
Query: 9 EEFGSGGTA-FLSTPSIYFSLDKDLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIPETLRGTFDMVVVDPPFVTRQV 236
E +GG A F+STPSIYFSL K+ R VFDLDT+W KDPGFV YD+ +P++ PE LR FDM+VVDPPF+TR+V
Sbjct: 38 EVVATGGKACFISTPSIYFSLTKEQREGNYVFDLDTQWEKDPGFVRYDFNEPENFPEELRHAFDMIVVDPPFITREV 114
BLAST of mRNA_Ecto-sp13_S_contig56730.16034.1 vs. uniprot
Match: C1FFV8_MICCC (Uncharacterized protein n=2 Tax=Eukaryota TaxID=2759 RepID=C1FFV8_MICCC) HSP 1 Score: 99.0 bits (245), Expect = 3.820e-24 Identity = 44/70 (62.86%), Postives = 57/70 (81.43%), Query Frame = 3
Query: 33 AFLSTPSIYFSLDKDLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIP--ETLRGTFDMVVVDPPFVTRQV 236
AFLSTPS+YFSL K++RA+ FDLDT+W K+PG+V YD+ KP D E L+GTFDMV++DPPF+TR+V
Sbjct: 62 AFLSTPSVYFSLSKEVRARSWCFDLDTQWQKEPGYVCYDFNKPIDFEGAEELKGTFDMVIIDPPFITREV 131
BLAST of mRNA_Ecto-sp13_S_contig56730.16034.1 vs. uniprot
Match: J9IRF9_9SPIT (N6-adenineMlase domain containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IRF9_9SPIT) HSP 1 Score: 97.4 bits (241), Expect = 9.250e-24 Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 3
Query: 3 EVEEFGSGGTAFLSTPSIYFSL-DKDLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIPETLRGTFDMVVVDPPFVTRQV 236
E E+FG AFLSTPS+YFSL +K+++A K FD D K+ KDP F+ YD+ KP+DIP L FDMVV+DPPF+TR+V
Sbjct: 33 ECEQFGKK-IAFLSTPSVYFSLKNKEIKANSKCFDYDEKFGKDPNFIFYDFNKPEDIPRELEKQFDMVVIDPPFITREV 110
BLAST of mRNA_Ecto-sp13_S_contig56730.16034.1 vs. uniprot
Match: A0A812SYR4_SYMPI (Eef1akmt1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812SYR4_SYMPI) HSP 1 Score: 100 bits (248), Expect = 1.590e-23 Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 3
Query: 21 SGGTAFLSTPSIYFSLDKDLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIPETLRGTFDMVVVDPPFVTRQV 236
SG A +S+PS+YFSL ++ R CKVFD D +W DPGFV YD+ +P+D+PE LRG F V++DPPF+TR+V
Sbjct: 38 SGPAALVSSPSVYFSLPEERRRSCKVFDFDRQWDTDPGFVFYDFNRPEDLPEDLRGAFHFVLIDPPFITREV 109
BLAST of mRNA_Ecto-sp13_S_contig56730.16034.1 vs. uniprot
Match: A0A812RZH7_9DINO (Eef1akmt1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RZH7_9DINO) HSP 1 Score: 96.7 bits (239), Expect = 2.300e-23 Identity = 42/79 (53.16%), Postives = 59/79 (74.68%), Query Frame = 3
Query: 6 VEEF--GSGGTAFLSTPSIYFSLDKDLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIPETLRGTFDMVVVDPPFVTRQV 236
VEE +G A +S+PS+YFSL ++ R KCKV D D +W DPGFV YD+ +P+++PE LRG+F V++DPPF+TR+V
Sbjct: 31 VEEICDANGPAALVSSPSVYFSLPEEHRRKCKVLDFDRQWESDPGFVFYDFHEPENLPEALRGSFAFVLIDPPFITREV 109
BLAST of mRNA_Ecto-sp13_S_contig56730.16034.1 vs. uniprot
Match: A0A7S3I0D0_9SPIT (Hypothetical protein n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3I0D0_9SPIT) HSP 1 Score: 95.9 bits (237), Expect = 2.830e-23 Identity = 44/71 (61.97%), Postives = 56/71 (78.87%), Query Frame = 3
Query: 27 GTAFLSTPSIYFSL-DKDLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIPETLRGTFDMVVVDPPFVTRQV 236
G AFLSTPSIYFSL DK ++A+ K D DT + KDP +V YD+ +P+D+PE L GTF MVV+DPPF+TR+V
Sbjct: 28 GCAFLSTPSIYFSLKDKGVKARSKCLDFDTAFNKDPNYVFYDFNRPEDLPEELCGTFHMVVIDPPFITREV 98 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56730.16034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig56730.16034.1 >prot_Ecto-sp13_S_contig56730.16034.1 ID=prot_Ecto-sp13_S_contig56730.16034.1|Name=mRNA_Ecto-sp13_S_contig56730.16034.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp RKWRSLDLAVPRFCPPRAFTSPWTRISGRNARFLTLTPSGRKTPVSCFMTback to top mRNA from alignment at Ecto-sp13_S_contig56730:317..839- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig56730.16034.1 ID=mRNA_Ecto-sp13_S_contig56730.16034.1|Name=mRNA_Ecto-sp13_S_contig56730.16034.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=523bp|location=Sequence derived from alignment at Ecto-sp13_S_contig56730:317..839- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig56730:317..839- >mRNA_Ecto-sp13_S_contig56730.16034.1 ID=mRNA_Ecto-sp13_S_contig56730.16034.1|Name=mRNA_Ecto-sp13_S_contig56730.16034.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=237bp|location=Sequence derived from alignment at Ecto-sp13_S_contig56730:317..839- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |