mRNA_Ecto-sp13_S_contig5650.15998.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5650.15998.1
Unique NamemRNA_Ecto-sp13_S_contig5650.15998.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig5650.15998.1 vs. uniprot
Match: D7G7I7_ECTSI (SURF1-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I7_ECTSI)

HSP 1 Score: 723 bits (1867), Expect = 3.100e-260
Identity = 363/382 (95.03%), Postives = 373/382 (97.64%), Query Frame = 3
Query:   93 MPLSACRHAVRHRGSIILLRHSGTAAASKQKPIAVIKPAAGTISDARHAYNSSARWQQQAAAGQEEEGWTGGDGGERGGHAGARILGIVVFSSLVGATACLGTWQAMRYSWKLDLIESRRARMDFEPVDLPEGLEGAALATMMDVLDKEADGKASKGPNGETLGGSEEGKGLLESLEGRRLRVTGVFDHGKEVLVGPRGAPPGMKATSGPSSMAPSPMGDFVHTPLKRADGSVVLVNRGWVPRSKGLQWSRPEGEVTMVGVLKAAEKRSTFSPDNKPETRHLLWAEKAALLQAAGLGQHGAEEGVQSMPILMEAVGEEDGDKKTMPMAKKPQHFGDFYVTPQTHLMYSATWYALAAAGCALTWARFRRRGPAAFPTAKPPGL 1238
            M LSACRHA+R RGSI+LLRHS TAAASK+KPIAVIK AAGTISDARH +NSSARWQQQAAAGQ E+GWTGGDGGERGGHAGARILGIVVFSSLVGATACLGTWQAMRYSWKLDLIESR+ARM+FEPVDLPEGLEGA LATMMDVLDKEADGKASKGPNGETLGGSEEGKGLLESLEGRRLRVTGVFDHGKEVLVGPRGAPPGMKATSGPSSMAPSPMGDFVHTPLKR DGSVVLVNRGWVPRSKG QWSRPEGEVTMVGVLKAAEKRSTFSPDNKPETRHLLWAEKAALLQAAGLGQHGAEEGVQS+PILMEAVGEEDGDKKTMPMAKKP+HFGDFYVTPQTHLMYSATWYALAAAGCALTWARFRRRGPAAFPTAKPPG+
Sbjct:    1 MSLSACRHALRQRGSIVLLRHSSTAAASKRKPIAVIKSAAGTISDARHVHNSSARWQQQAAAGQGEKGWTGGDGGERGGHAGARILGIVVFSSLVGATACLGTWQAMRYSWKLDLIESRKARMEFEPVDLPEGLEGATLATMMDVLDKEADGKASKGPNGETLGGSEEGKGLLESLEGRRLRVTGVFDHGKEVLVGPRGAPPGMKATSGPSSMAPSPMGDFVHTPLKRGDGSVVLVNRGWVPRSKGPQWSRPEGEVTMVGVLKAAEKRSTFSPDNKPETRHLLWAEKAALLQAAGLGQHGAEEGVQSVPILMEAVGEEDGDKKTMPMAKKPKHFGDFYVTPQTHLMYSATWYALAAAGCALTWARFRRRGPAAFPTAKPPGI 382          
BLAST of mRNA_Ecto-sp13_S_contig5650.15998.1 vs. uniprot
Match: A0A6H5JV33_9PHAE (SURF1-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV33_9PHAE)

HSP 1 Score: 642 bits (1657), Expect = 1.640e-228
Identity = 331/368 (89.95%), Postives = 338/368 (91.85%), Query Frame = 3
Query:   93 MPLSACRHAVRHRGSIILLRHSGTAAASKQKPIAVIKPAAGTISDARHAYNSSARWQQQAAAGQEEEGWTGGDGGERGGHAGARILGIVVFSSLVGATACLGTWQAMRYSWKLDLIESRRARMDFEPVDLPEGLEGAALATMMDVLDKEADGKASKGPNGETLGGSEEGKGLLESLEGRRLRVTGVFDHGKEVLV-----------------GPRGAPPGMKATSGPSSMAPSPMGDFVHTPLKRADGSVVLVNRGWVPRSKGLQWSRPEGEVTMVGVLKAAEKRSTFSPDNKPETRHLLWAEKAALLQAAGLGQHGAEEGVQSMPILMEAVGEEDGDKKTMPMAKKPQHFGDFYVTPQTHLMYSATW 1145
            M LSACRHA+RHRGSIILLRHS TAAA KQKPIAVI PA GTISDARHAYNSSARWQQQAAAGQ EEGWTGGDGGERGGHAGARILGI VFSSLVGATACLGTWQAMRYSWKLDLIESRRA+M+ EPVDLPEGLEGAALATMMDVLDKEADGKASKGPNGETLGGSEEGKGLL SLEGRRLRVTGVFDHGKEVLV                 GPRGAPPGMKATSGPSSMAPSPMGDFV+TPLKR DGSVVLVNRGWV RSKGLQWSRPEGEVTMVGVLKAAEKRSTFSPDNKPETRHLLWAEKAALLQAAGLG+HGA EGVQS+PILMEAVGEEDGDKKTMPMAK P+HFGDFYVTPQTHLMYSATW
Sbjct:    1 MSLSACRHALRHRGSIILLRHSSTAAALKQKPIAVITPAEGTISDARHAYNSSARWQQQAAAGQGEEGWTGGDGGERGGHAGARILGIAVFSSLVGATACLGTWQAMRYSWKLDLIESRRAKMELEPVDLPEGLEGAALATMMDVLDKEADGKASKGPNGETLGGSEEGKGLLGSLEGRRLRVTGVFDHGKEVLVAKQRITSVFSATAAYFPGPRGAPPGMKATSGPSSMAPSPMGDFVYTPLKRGDGSVVLVNRGWVSRSKGLQWSRPEGEVTMVGVLKAAEKRSTFSPDNKPETRHLLWAEKAALLQAAGLGRHGAGEGVQSVPILMEAVGEEDGDKKTMPMAKTPKHFGDFYVTPQTHLMYSATW 368          
BLAST of mRNA_Ecto-sp13_S_contig5650.15998.1 vs. uniprot
Match: A0A835ZFZ9_9STRA (SURF1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFZ9_9STRA)

HSP 1 Score: 227 bits (578), Expect = 2.390e-66
Identity = 129/289 (44.64%), Postives = 171/289 (59.17%), Query Frame = 3
Query:  342 RILGIVVFSSLVGATACLGTWQAMRYSWKLDLIESRRARMDFEPVDLPEGLEGAALATMMDVLDKEADGKASKGPNGETLGGSEEGKGLLESLEGRRLRVTGVFDHGKEVLVGPRGAPPGMKATSGPSS--MAPSPMGDFVHTPLKRADGSVVLVNRGWVPRSKGLQWSRPEGEVTMVGVLKAAEKRSTFSPDNKPETRHLLWAEKAALLQAAGLGQHGAEEGVQSMPILMEAVGE--EDGDKKTMPMAKKPQHFGDFYVTPQTHLMYSATWYALAAAGCALTWARFRR 1196
            R  GI +F++LVG+T  LGTWQA RY WK+DL+E  + ++  EP DLP        AT  DV                    S EG  L+    G R+R  GVFDH KEVLVGPR AP   ++T GP +  MA +P G FV+TPL+R DG+ +LVNRGWVP++    W RPEG V ++GV++  EK + FSP ++P  R L+W +   L  AAGL  +        +P+LM+A  E  E   +   P+ K+      FYVTPQTHLMY+ATWY+LAA   A+T+ARFR+
Sbjct:   42 RGAGIALFAALVGSTVGLGTWQAFRYQWKVDLVEQSQKQLSSEPTDLPSD------ATQKDV--------------------SREGSTLV----GTRVRARGVFDHSKEVLVGPRAAPKSQESTKGPGAGGMATNPQGYFVYTPLRRQDGTAILVNRGWVPQTAS-SWGRPEGVVEVLGVVRQGEKPNRFSPKHEPGMRKLMWVDLPTLALAAGLAANTLS--ADKLPVLMDAALEDSEPFSRGESPVPKRISDIDQFYVTPQTHLMYAATWYSLAAFATAITYARFRK 297          
BLAST of mRNA_Ecto-sp13_S_contig5650.15998.1 vs. uniprot
Match: A0A7S0F0L0_9EUKA (SURF1-like protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0F0L0_9EUKA)

HSP 1 Score: 171 bits (434), Expect = 3.810e-45
Identity = 111/306 (36.27%), Postives = 158/306 (51.63%), Query Frame = 3
Query:  342 RILGIVVFSSLVGATACLGTWQAMRYSWKLDLIESRRARMDFEPVDLPEGLEGAALATMMDVLDKEADGKASKGPNGETLGGSEEGKGLLESLEGRRLRVTGVFDHGKEVLVGPRGAPPGMKATSGPSSMAPSPMGDFVHTPLKRADGSVVLVNRGWVPRSKGLQ-------------------WSRPEGEVTMVGVLKAAEKRSTFSPDNKPETRHLLWAEKAALLQAAGLGQHGAEEGVQSMPILMEAV---GEEDGDKKTMPMAKKPQHFGDFYVTPQTHLMYSATWYALAAAGCALTWARFR 1193
            R++GIV+FSSLVG    L +WQ  RY+WKL L+E RR R+  E   L E +  A LA +                       +E+    +E  E RR+ V G FDH +++L+GPR APPG K    P     SP G  + TPL+  DG+V+LVNRGWVPR   +                    +S+P G   + GVLK  E+++ ++ +NKPE +  +W + A +    G           S P+L+ A    GE+   K   PM +  + F DFYV+P THL+Y++TW AL+ AG  +T+ RFR
Sbjct:   70 RVVGIVLFSSLVGYVTYLCSWQMKRYNWKLSLVELRRERVTGEVRPLTELVSAADLADVQR---------------------TEQLAAAVEEEEFRRVAVRGEFDHTQQMLLGPRSAPPGAKQHGAPGG---SPSGWDIVTPLRCEDGTVILVNRGWVPRDSTVPARDPVTGKPNGHAFGVPAAFSQPRGAQEVHGVLKKGEQKNKYA-ENKPEEQRYVWLDLATMASEGG-----------SAPLLVVAAAQPGEQPDVKPEWPMTRPLESFLDFYVSPTTHLVYASTWGALSVAGAFMTFRRFR 339          
BLAST of mRNA_Ecto-sp13_S_contig5650.15998.1 vs. uniprot
Match: A0A067BT23_SAPPC (SURF1-like protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BT23_SAPPC)

HSP 1 Score: 146 bits (369), Expect = 1.250e-36
Identity = 101/298 (33.89%), Postives = 145/298 (48.66%), Query Frame = 3
Query:  342 RILGIVVFSSLVGATACLGTWQAMRYSWKLDLIESRRARMDFEPVDLPEGLEGAALATMMDVLDKEADGKASKGPNGETLGGSEEGKGLLESLEGRRLRVTGVFDHGKEVLVGPRGAPPGMKATSGPSSMAPSPMGDFVHTPLKRADGSVVLVNRGWVPRSK-----GLQWSRPEGEVT-------MVGVLKAAEKRSTFSPDNKPETRHLLWAEKAALLQAAGLGQHGAEEGVQSMPILMEAVGEED-GDKKTMPMAKKPQ-HFGDFYVTPQTHLMYSATWYALAAAGCALTWARFR 1193
            ++LGI +FSS+V  TA +G WQ+ RY WK+DLIE+RR R+   PV LP  +                   A++  N E              LE R+L V G F  GK   + PR  P  M  + G  S      G F++   +RA+G+ V+VNRGW+P+ +      L  SRP  EV        +VGV+   E+  TFSP N+P  RH  W  +  L  A  +G+       +  PIL+E   +E    K    + KK +  + +FY+TP  H MY+  W++LA  G  + + RFR
Sbjct:    5 QLLGIGIFSSIVAGTASMGVWQSNRYFWKVDLIETRRQRLQEAPVPLPNDI-------------------AAENVNAE--------------LEHRQLAVEGHFVPGKTFYLYPRSPPIDMSESKGKVSS-----GGFIYDLFERANGTSVIVNRGWLPKDEMEKHMALTTSRPPEEVNAAPATVQLVGVMVQGEEEKTFSPPNEPTKRHFFWLNQPELAHAM-MGK------TEYTPILLEEFNDEPTAAKNAQELVKKHKDQYLEFYMTPWKHAMYAGIWFSLALMGTGMVFYRFR 257          
BLAST of mRNA_Ecto-sp13_S_contig5650.15998.1 vs. uniprot
Match: A0A7S1TQS9_9STRA (SURF1-like protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQS9_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.530e-36
Identity = 102/302 (33.77%), Postives = 148/302 (49.01%), Query Frame = 3
Query:  333 AGARILGIVVFSSLVGATACLGTWQAMRYSWKLDLIESRRARMDFEPVDLPEGLEGAALATMMDVLDKEADGKASKGPNGETLGGSEEGKGLLESLEGRRLRVTGVFDHGKEVLVGPRGAPPGMKATSGPSSMAPSPMGDFVHTPLKRADGSVVLVNRGWVPRSKGLQWSRPEGEVTMVGVLKAAEKRSTFSPDNKPETR--HLLWAEKAALLQAAGLGQHGAEEGVQSMPILMEAVGEEDGDKKTMPMAKKPQHFGDFYVTPQTHLMYSATWYALAAAGCALTWARFRRRGPAAFPTAKPP 1232
            AG  I G++ F  +   T  LGTWQ  RY  K+D +E+RR  +  +P   P G   AAL                                 +E     ++ + G FDH +E+ V  RG P       G   +A  P+GD+V  PL+  DG+VV VNRGWVPR+    W+RPEGEV +VGV+   EK++T+SP N PE     L W E+  + + AG+         Q++ + ++A+ E   D +++ + K    F  F V+P+TH  Y+ATW+ L   G  +T  R R RG  + P  K P
Sbjct:   16 AGLGIGGMLFFGGITLGTGALGTWQCKRYFEKVDEVEARRITLASQPAAAPTG---AALRA-------------------------------VEPFS--KVAIRGSFDHAREMRVINRGPPESRAGLQG--GLATGPIGDYVLVPLRLRDGTVVFVNRGWVPRNTAT-WARPEGEVEVVGVVTQMEKQNTYSPPNSPEKDGGKLYWIEEGKMKEYAGISD------AQAI-VYLQAMSEGAADDESL-VRKLVADFMRFAVSPETHAGYAATWFGLCFFGIIMTVMRARGRG-GSLPKPKMP 269          
BLAST of mRNA_Ecto-sp13_S_contig5650.15998.1 vs. uniprot
Match: A0A7S0JMS6_9EUKA (SURF1-like protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JMS6_9EUKA)

HSP 1 Score: 145 bits (365), Expect = 6.760e-36
Identity = 96/286 (33.57%), Postives = 143/286 (50.00%), Query Frame = 3
Query:  342 RILGIVVFSSLVGATACLGTWQAMRYSWKLDLIESRRARMDFEPVDLPEGLEGAALATMMDVLDKEADGKASKGPNGETLGGSEEGKGLLESLEGRRLRVTGVFDHGKEVLVGPRGAPPGMKATSGPSSMAPSPMGDFVHTPLKRADGSVVLVNRGWVPRSKGLQWSRPEGEVTMVGVLKAAEKRSTFSPDNKPETRHLLWAEKAALLQAAGLGQHGAEEGVQSMPILMEAVGEE-DGDKKTMPMAKKPQHFGDFYVTPQTHLMYSATWYALAAAGCALTWARFRR 1196
            R +G  +F+     T CL  WQ  R  WKL L++ R AR+   PV L     G+ L   + +L                           E+LE R++ + GVF+H K++L+GPR APP    ++   + AP+  G  V TP+  +DG  VLVNRGWV R +  + S P GEV ++GVL+A E  + ++ ++    R  +W +  AL +A             S PIL+ +  +  +      P+ +    F DFYV P THL+Y+ATW +L+ AG  LT+ RF R
Sbjct:   43 RRVGAAIFTCASVGTGCLSCWQLQRRQWKLALVDERSARLQAAPVSL-----GSLLPASVALLP--------------------------EALEFRQVELFGVFEHEKQILLGPRSAPPSSGGSATVPTGAPTQSGWDVITPMVCSDGRRVLVNRGWVARDQVDRLSLPAGEVGVIGVLRAGEAGNRYARNDVANGR-FVWLDLDALAEATS-----------SSPILVFSQKDALEAKPNAWPLPRPHASFVDFYVQPTTHLVYAATWASLSIAGACLTYMRFVR 285          
BLAST of mRNA_Ecto-sp13_S_contig5650.15998.1 vs. uniprot
Match: A0A7S3X005_9SPIT (SURF1-like protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3X005_9SPIT)

HSP 1 Score: 144 bits (362), Expect = 1.580e-35
Identity = 99/287 (34.49%), Postives = 134/287 (46.69%), Query Frame = 3
Query:  342 RILGIVVFSSLVGATACLGTWQAMRYSWKLDLIESRRARMDFEPVDLPEGLEGAALATMMDVLDKEADGKASKGPNGETLGGSEEGKGLLESLEGRRLRVTGVFDHGKEVLVGPRGAPPGMKATSGPSSM--APSPMGDFVHTPLKRADGSVVLVNRGWVPRSKGLQWSRPEGEVTMVGVLKAAEKRSTFSPDNKPETRHLLWAEKAALLQAAGLGQHGAEEGVQSMPILMEAVGEEDGDKKTMPMAKKPQHFGDFYVTPQTHLMYSATWYALAAAGCALTWARFRR 1196
            R  G V+FSSL   T  L  WQ  RY WK +LIE R A +   P  L   L   A                                 +   LE RR+  +G FDH K+VL+GPR AP GM++  G  +   AP+  G  V TPL   DGSV+LVNRGWVPR +    S+P G   + G+L+  E  + F+  N P+ R  ++ +  AL +  G           S  ++ +     D      P+ +    F +FYV P THL+Y+ATW +L A G  LT+ RF R
Sbjct:   36 RRTGTVLFSSLSLGTGALAGWQLHRYQWKTELIERRTAVLSSPPQPLRSVLAADAGT-------------------------------VPPELEYRRVHCSGTFDHSKQVLLGPRSAPAGMESAGGGRAPPGAPTASGWDVVTPLCCEDGSVLLVNRGWVPRDQVQAISKPMGSQRVEGILRCGEAGNRFA-QNDPQHRRFVFLDVQALAELNG----------SSQVLIYQTRETGDATDSQWPVLRPTTSFLNFYVQPSTHLVYAATWSSLCALGGVLTYLRFLR 280          
BLAST of mRNA_Ecto-sp13_S_contig5650.15998.1 vs. uniprot
Match: A0A0M0J7Q0_9EUKA (SURF1-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7Q0_9EUKA)

HSP 1 Score: 144 bits (362), Expect = 2.130e-35
Identity = 99/294 (33.67%), Postives = 135/294 (45.92%), Query Frame = 3
Query:  342 RILGIVVFSSLVGATACLGTWQAMRYSWKLDLIESRRARMDFEPVDLPEGLEGAALATMMDVLDKEADGKASKGPNGETLGGSEEGKGLLESLEGRRLRVTGVFDHGKEVLVGPRGAPPGMKATSGPSSMAPSPMGDFVHTPLKRADGSVVLVNRGWVPRSKGLQWSRPEGEVTMVGVLKAAEKRSTFSPDNKPETRHLLWAEKAALLQAAGLGQHGAEEGVQSMPILMEAVGE----EDGDK-----KTMPMAKKPQHFGDFYVTPQTHLMYSATWYALAAAGCALTWARFRR 1196
            R LG  +FS L G TACL  WQ  RY  K+ ++E R+  +   P  L E     +                                G+    E  R+ V G FDH ++VL+GPR APPG    + P+  AP+  G  V TPL  ADGS VLVNRGWVPR       +P G+  + GVLK  ++ + +   N P     +W + A+L +++G           S PIL+ A  E     DG       +T P  +       FYV P TH++Y+ATW +L  AG  +T  RF R
Sbjct:   43 RRLGAALFSGLCGTTACLCGWQVKRYGDKVQMVEDRKTALQAAPRPLREVYPELSA-------------------------------GISAGDEYTRVSVEGTFDHARQVLLGPRSAPPGSDKGNSPAG-APAQSGWDVVTPLACADGSRVLVNRGWVPRDATAAIDQPTGQQRIEGVLKQGDRENKYG-HNDPAAGRYVWLDLASLARSSG-----------SSPILVMAAAEGSDASDGRAASSVHRTWPRVRPLSSLMSFYVEPHTHIVYAATWASLTVAGAVITVKRFVR 292          
BLAST of mRNA_Ecto-sp13_S_contig5650.15998.1 vs. uniprot
Match: A0A8K1CE13_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE13_PYTOL)

HSP 1 Score: 134 bits (336), Expect = 1.170e-31
Identity = 88/299 (29.43%), Postives = 138/299 (46.15%), Query Frame = 3
Query:  339 ARILGIVVFSSLVGATACLGTWQAMRYSWKLDLIESRRARMDFEPVDLPEGLEGAALATMMDVLDKEADGKASKGPNGETLGGSEEGKGLLESLEGRRLRVTGVFDHGKEVLVGPRGAPPGMKATSGPSSMAPSPMGDFVHTPLKRADGSVVLVNRGWVPRS-----KGLQWSRPEGEVTMVGVLKAAEKRSTFSPDNKPETRHLLWAEKAALLQAAGLGQHGAEEGVQSMPILMEAVGEEDGDKKTM---PMAKKPQHFGDFYVTPQTHLMYSATWYALAAAGCALTWARFRRRGPAA 1211
            +R  GI  FS +V  TA LGTWQ  RY WK+DLIE R+ ++    VDLP  +   +                                  L   E  +LRV G +       + PR AP          S+A    G ++++ L+R +GS V++NRGW+PR               G++ ++GVL+  E ++ F+PDN    R   +     L  A G+     EE +  +P++++A+ +ED         P+ KK   + +FY+TP+ H  Y+ATWY+ + A   + + RFR+  P A
Sbjct:   41 SRYAGIAFFSVIVAGTAGLGTWQTQRYFWKVDLIEERKKQLKQNVVDLPNDVTAFSE---------------------------------LNVPEYCQLRVNGQYKPNTTFYLYPRSAP-----AESTDSVATPKSGGYIYSLLERDNGSPVIINRGWLPRKLLDVHMASADKEESGDIAILGVLRHGETKNQFTPDNDISRRQFFYLNHDELADAMGV-----EESI--LPVILDAIADEDDLAPAALDHPLRKKLSSYLEFYMTPEKHAGYAATWYSFSVAAALMAYFRFRKVAPRA 294          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5650.15998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7I7_ECTSI3.100e-26095.03SURF1-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5JV33_9PHAE1.640e-22889.95SURF1-like protein n=1 Tax=Ectocarpus sp. CCAP 131... [more]
A0A835ZFZ9_9STRA2.390e-6644.64SURF1-like protein n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S0F0L0_9EUKA3.810e-4536.27SURF1-like protein n=1 Tax=Phaeocystis antarctica ... [more]
A0A067BT23_SAPPC1.250e-3633.89SURF1-like protein n=2 Tax=Saprolegnia TaxID=4769 ... [more]
A0A7S1TQS9_9STRA2.530e-3633.77SURF1-like protein n=1 Tax=Phaeomonas parva TaxID=... [more]
A0A7S0JMS6_9EUKA6.760e-3633.57SURF1-like protein n=1 Tax=Calcidiscus leptoporus ... [more]
A0A7S3X005_9SPIT1.580e-3534.49SURF1-like protein n=1 Tax=Strombidinopsis acumina... [more]
A0A0M0J7Q0_9EUKA2.130e-3533.67SURF1-like protein n=1 Tax=Chrysochromulina tobini... [more]
A0A8K1CE13_PYTOL1.170e-3129.43Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5650contigEcto-sp13_S_contig5650:2181..7354 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score728.0
Seed ortholog evalue2.3e-207
Seed eggNOG ortholog2880.D7G7I7
Preferred nameSURF1
Model size1613
KEGG koko:K14724,ko:K14998
KEGG TC2.A.36.1.12,2.A.36.1.9,3.D.4.8
Hectar predicted targeting categorymitochondrion
GOsGO:0002164,GO:0002165,GO:0002168,GO:0003674,GO:0003824,GO:0004129,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006996,GO:0007005,GO:0007275,GO:0007610,GO:0007632,GO:0008150,GO:0008152,GO:0008324,GO:0008535,GO:0009055,GO:0009058,GO:0009060,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009416,GO:0009453,GO:0009605,GO:0009628,GO:0009791,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0015980,GO:0016020,GO:0016021,GO:0016043,GO:0016310,GO:0016491,GO:0016675,GO:0016676,GO:0017004,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019866,GO:0022607,GO:0022857,GO:0022890,GO:0022900,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0033108,GO:0033617,GO:0034220,GO:0034622,GO:0034641,GO:0034654,GO:0040011,GO:0042330,GO:0042331,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045333,GO:0046034,GO:0046390,GO:0046483,GO:0048856,GO:0050896,GO:0051082,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0065003,GO:0070469,GO:0071704,GO:0071840,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600
Exons7
EggNOG free text desc.Probably involved in the biogenesis of the COX complex
EggNOG OGsCOG3346@1,KOG1563@2759
Ec32 ortholog descriptionSURF1/SHY1 homolog, cytochrome c oxidase assembly protein
Ec32 orthologEc-02_000440.1
Cds size1149
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5650.15998.1prot_Ecto-sp13_S_contig5650.15998.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5650 2553..7262 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463782.636921-UTR-Ecto-sp13_S_contig5650:2180..25521681463782.636921-UTR-Ecto-sp13_S_contig5650:2180..2552Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5650 2181..2552 -
1681463782.7422159-UTR-Ecto-sp13_S_contig5650:7262..73541681463782.7422159-UTR-Ecto-sp13_S_contig5650:7262..7354Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5650 7263..7354 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463782.6508942-CDS-Ecto-sp13_S_contig5650:2552..26491681463782.6508942-CDS-Ecto-sp13_S_contig5650:2552..2649Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5650 2553..2649 -
1681463782.6655717-CDS-Ecto-sp13_S_contig5650:3087..31931681463782.6655717-CDS-Ecto-sp13_S_contig5650:3087..3193Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5650 3088..3193 -
1681463782.6833386-CDS-Ecto-sp13_S_contig5650:3725..39291681463782.6833386-CDS-Ecto-sp13_S_contig5650:3725..3929Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5650 3726..3929 -
1681463782.701371-CDS-Ecto-sp13_S_contig5650:4883..50391681463782.701371-CDS-Ecto-sp13_S_contig5650:4883..5039Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5650 4884..5039 -
1681463782.7143857-CDS-Ecto-sp13_S_contig5650:5547..57261681463782.7143857-CDS-Ecto-sp13_S_contig5650:5547..5726Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5650 5548..5726 -
1681463782.724508-CDS-Ecto-sp13_S_contig5650:6147..62721681463782.724508-CDS-Ecto-sp13_S_contig5650:6147..6272Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5650 6148..6272 -
1681463782.7329211-CDS-Ecto-sp13_S_contig5650:6980..72621681463782.7329211-CDS-Ecto-sp13_S_contig5650:6980..7262Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5650 6981..7262 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5650.15998.1

>prot_Ecto-sp13_S_contig5650.15998.1 ID=prot_Ecto-sp13_S_contig5650.15998.1|Name=mRNA_Ecto-sp13_S_contig5650.15998.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=383bp
MPLSACRHAVRHRGSIILLRHSGTAAASKQKPIAVIKPAAGTISDARHAY
NSSARWQQQAAAGQEEEGWTGGDGGERGGHAGARILGIVVFSSLVGATAC
LGTWQAMRYSWKLDLIESRRARMDFEPVDLPEGLEGAALATMMDVLDKEA
DGKASKGPNGETLGGSEEGKGLLESLEGRRLRVTGVFDHGKEVLVGPRGA
PPGMKATSGPSSMAPSPMGDFVHTPLKRADGSVVLVNRGWVPRSKGLQWS
RPEGEVTMVGVLKAAEKRSTFSPDNKPETRHLLWAEKAALLQAAGLGQHG
AEEGVQSMPILMEAVGEEDGDKKTMPMAKKPQHFGDFYVTPQTHLMYSAT
WYALAAAGCALTWARFRRRGPAAFPTAKPPGL*
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mRNA from alignment at Ecto-sp13_S_contig5650:2181..7354-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5650.15998.1 ID=mRNA_Ecto-sp13_S_contig5650.15998.1|Name=mRNA_Ecto-sp13_S_contig5650.15998.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5174bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5650:2181..7354- (Ectocarpus species13 EcNAP12_S_4_19m)
TCTGCACTCCGGTTGGTTATCTCGCCGCATTTCTCACCCTTTCGGTTATG CGGTAATGGGGCACTTACTCTTCGGCGAAGAGAGCAAGCAGCATGCCTCT GTCCGCGTGTCGCCATGCCGTGCGCCACCGTGGCTCAATCATTCTTCTCC GACACAGTGGCACCGCAGCAGCTTCGAAGCAGAAGCCGATCGCCGTGATA AAACCAGCAGCAGGGACAATCTCGGATGCTCGCCATGCGTATAACAGCTC AGCGCGGTGGCAACAGCAAGCGGCAGCCGGGCAGGAAGAGGAAGGGTGGA CTGGAGGCGACGGCGGCGAACGAGGAGGCCATGCAGGAGCTAGAATACTC GGCATTGTTGTGTTCTCGTCCCTTGTGAGTATTCTGTGAAAAGGCAGTCT GTGAACGCTATGTATTGCATGTAGTCAACTGCGCTGCCCTTGTAGACTAC AGAGTATCGGCGAGGTCGTGAAAACCAGTGTTGTAGATTCTTCGAAATGC GTTTCCGCACAAGAGTGTTTGCGCCAAGAGGCTCGCCCTTGATGCATGGG CACCCATGCTCCATGTTGTGACCGCTCAAGCACTCCGAAGCCTTACATAT ATCGCTCCAATTGGCAATCTTCACGCGGGATATGCACTGTGCATCATTGA TGATGTCATCGATGCTGCTGGGGAGGAGACATGGGCTCTGACTCACAGGT CCAGCCCCTCTCCTCTGCTGCTGTTGGCGCCGTTGGTTCTCTGTACGCCG CACTCGTAATGGTGGGTCGAGACACGACTGAAAGTAGATAGCGAAGCGAA GCTTCCCGTTGATTTCCGTTTCAAGCGCTTTGCTCTGAAGAAGAGGAACA GGAGGCCTCTACAGCGGCGGGTGGCCGCACTGGCTCTTATACAGTAGTGC GCACCTGTGGGTTGTCCAGAGCTGCCTCTGTACATAGTTCGCGCGTTCTA GTGTTTCTCGCTAGCCTGGCCTTGGCACACTATATTTCCCAACAGGACAT CAATCATGTGCCCCGCGTCCCCGGCTCTCTTCCCTCCCTCTGTCTGTCTC TCTCTCTCTCTCTGTTCTTGTCTGGTACACAGGTAGGAGCTACGGCATGC CTGGGAACGTGGCAGGCGATGCGCTACTCGTGGAAGCTGGACTTGATCGA AAGCAGGAGGGCCAGAATGGATTTCGAGCCCGTCGATCTTCCTGAAGGCC TAGAAGGGTGAGCCGTTTTCGTCCTGACTGCATGACACCGCTGCTGCGGA CTTTTTTGACCGCCGAAGTTGTGATCGCGGTATTACTTGTCAAGAAGTTG ACCTGGTGCTTGGTGGACAAAGAAAATCTATAACCCCATAGGTATTGTAG GTCCCGCAGAACGGTACAGAGATGGGGATTGTGCAAAATGCATGCAAGTA ATACCTCCATGGCTTAGTGTGTTGGGGTCTGCATGCAACCCCCCCGGGGT GACGCTTTTCTCATTTGGGCCCAGCGGCAGCCGCAACGTTGCTCTTTACC AACCAGGAAGCTACGTACGTAAAGGAAGAATTGCGTCGACTTTGTAGCCG TGCGGACGATTAGGATTTCTTGGCACCTGCACAACACGTACATAAGCCCC TTGCTTTCATGATCTGGTTCTTCGGCAGCGCCGCGCTGGCTACGATGATG GATGTCTTGGACAAGGAAGCGGATGGGAAGGCGTCGAAGGGGCCAAACGG AGAGACTCTGGGGGGGAGTGAGGAGGGTAAAGGTTTGCTCGAGAGTCTGG AGGGCAGGCGGTTGCGGGTGACCGGGGTTTTCGATCACGGCAAGGAGGTG CTAGTCGGTGAGTTCGTTCGCGTGTGGGCAAAACCTCTTGGCCGGACTGT TGGGTTTAGCGCTTGTTAGGGCTCACTATAATAGCGGCACGGGAACGTGG TGTGGTGACTTGGCTCCGAATCTGTCATGAAGCACGGATTTGTTTCCCCT CAGACTGGCTACGATTCCAAGAAGTGGTCGGAGTGCATGAGATAGATATG CGTAGGTGCGTGTATCGGGTTGTTTGGTGACTGGCATTGGTCTGTTCGTA CGTCCCGCTGGAGGGCTTCGTCCGCGTGCGTTGCCGCATTGATCGCTTTG CGCACTCCCAGAGAACAACTAATGGTTTGGACAGGTTGGAAACGAATGGA GACCTAATGGCTGTGCACACAACGAACAAACACCAATGGGACCATGACCA CCAACAATAACTCAAGCAAGCGGTCAGTCGAACCACAACAACCACCACAG CAAGAAGAAGCCAGCAAAGCAAAGGATTGCATCCGTTTTTTCTGCCACTG CGTCCGATTTTCCAGGACCGAGAGGCGCTCCACCAGGAATGAAGGCAACG TCGGGACCGTCGTCCATGGCCCCGAGCCCCATGGGCGACTTCGTCCACAC CCCGCTCAAGAGGGCAGACGGCTCCGTGGTGCTCGTGAACAGGGGATGGG TACCTCGCTCCAAGGGGCTCCGTAAGTACATCGATGGTGCTGTTTTGGTC GTGTGTGGAAATCGACATGTTCTGTTTTGAGCCGAGGCGTAAACGTTGAT GCCTCTGGGAGGGGACGGCTTTGTGATGCTTGCTGAGCGGGCGTGAGTGG GCTGTTTGGTTAGCTGATTATTTTTATTGACCTTGCAAGCAGTTGTGGAA ATGTTGCGCGGTGCGTATTCAAGCTCCCTGGCGCACTTTTACCGTGGACT TCACTCGTGCGCTGGGGTCATGTGATGTCATATCTCAGTGCTATGCTGTC CAAGGCCGCTGCAACGGTATTTTTCGGTCCTTCGGGTCGATTTTTAAGTT CTTCTTAAACGTTGGGGGTAGCGTAGCATCCTGGCGTGAGCAGACACCGC CTGTGGTTCTCCGGCAGATCTTGAGACAAGGGGATATGTGCAGATTCAGA GTGTGTCGTGCTGGAGGTCCGGCGAGAAGAGCAAATCTGTCCGACGAAGG GCGCGCGCTTGTCGTAGTCGTGTTTCGCGTTCGAGCGAATGTGTCCCCGT GGCTCCAAGCATAAAAAAAAGCGCTGCGTCGAAGTTAATATTTTCGTCGA GTTATCACGGGAGAGGATGGGGGGGTAGGCTGGCTGCTAGACTCTCGACC GCAAGGCCGCGCGAACGCTTGTGGTACGCTTGTTGAAACGGAAACGAACC GGAAACGTCGGCCCTTGCATGTGGTTGACGTGAGCTGCCTCTGGGGGGCC ATCCTGGCTGCAGACCACCACGTTCTTAGAAGCACACCAAGACAAGCATA TCGAAGGCTCGCTTCTTTTCGTGCCAGCAGAGATTGTGTGCGTGTGTGTT GGTCAGTAGGTTTTTTACATCTCACACACATTTGCCTTTCTTGTCGAAGC ATACCGTTCTCGTTCATCCTTGTCATGGTGTCGTTCGTTCGTTTCCCAAA TCCTGTCGCCCACGCGGACACGCAGAATGGTCTCGCCCGGAGGGAGAAGT CACCATGGTTGGCGTCCTGAAGGCCGCGGAGAAGCGGTCCACGTTTTCTC CTGACAACAAGCCCGAGACCCGCCACCTGCTATGGGCGGAGAAGGCTGCG CTGCTGCAGGCGGCGGGGTTGGGCCAACACGGGGCCGAGGAGGGGGTGCA GTCGATGCCCATATTGATGGAAGCGGTCGGTGAGAGCTATGGTTGCGTAG AACGACTTGTAGCTCGGTTCTGTTTCTGGCCCCTTTCTCCGATCCCGCAT GTGTGTCCGCGCGTACAAGATGGAGCACGTTATGTCTGTCACCCCTAAAA CGTCATGAAGTCACACACATTATTAGGGAGGCAGAACAAGGTGTGTCGAA CCGTGCTGTTGTTAAAGGCGTTCGATCGGTCGTTTACTTCAAGTCGGCGC CTTGCATCACTTCGCACGGCTGCGTTGTGCCTGGCAAGGGGATATTTTCG GCCACAAGCGTATCCGGGATGTCGTGCGCCCTTGAAGAATGTGAGGAGGG CCTTGTTTTTTTACCGCGCCCTTTGGTGCTAGGGACCCGAGGGTAGCCAA GATTTGATAAAGACCCAAGTGACGGAATATGCACGATTTCCTGTCGAACG ATAGTAGTATCCCCTACGGGGTAGCACGTCGCCGCTTGTGTAGTGCTGCA CTAGTTCATGTTTCAGCTTTTGATCGGATTTCACGCTTCGGCCGGTGCTG GTGTGTTGCAGGCGAAGAGGACGGCGACAAGAAGACCATGCCCATGGCGA AGAAGCCTCAACACTTCGGGGATTTCTACGTCACGCCTCAGACTCACCTC ATGTACTCGGCCACCTGGTGAGTTGCTCTTCATGCAATTGTCGTTGTAGA TGTGGTTGTTGCGGAAAATGAAAATACAGTATGTTGGTGTGTTGCTGGTT TTGTTGCCGTTGCTGTTGTTGTCGCCGCTGTGTTCTTGCTATTGATTTTT TCGTCGGGTTCGCACCGGCTCGAAAGAGGGATGGGATGATAAATCTTGTA CAATGTGCCGCATCGCAAGAGGTGTCTCGGCAGGCTAGCTACGAAGACCG TGAAAAAGGTCGTCATACGGCACACGTGGCCTTCGCATTTCAAACGGAAA CAGTAGTATGCTTACCCCTATCCTGGGGCCCGTGACCGTCGGTAGAATCG GGCAACAGGAAAACACCACTCAAGTGGCCCGTTTCCTCCCCCTGTTCCAA CCCCGATGTCACTTGCATCTATCTTGTCCGGGGCCCTGCTATTGGGACTG CCTAGGTACGCCCTCGCGGCTGCGGGCTGCGCGCTCACGTGGGCGAGATT TCGCAGGAGAGGGCCGGCCGCGTTTCCAACGGCCAAGCCTCCGGGACTTT GAGTGCGTTGCTTTGTGCGGCAGTGTACAGCGTTTAGCTGCAAAGGCTTT GGAGGGTGATTCAGAGGTAGCAGTCCTTTCTTCTTGAGATTATGGAATTC TTCAAAGAGTACGTCGAGAGGAACGGCACTCGGTTGGATTTTGCAGCCAG CGCATCTCCGAACAATTGTGATTCTGTTCTATTGTCATTTTCCCACCCGT CCGGAGAGTTAACACCAAAAAACTGTTAGTACCTGGTCGTACTGGCGTTG GTGGCCTACGCAGGCATTGATTCTCGGATGCAGTCGGAGGATCCACGAAA GAGCCTGCCAGGCGCGTGCCCCATGCGGGGGGGCACACTTTTTTTCTGTG CCAAGACTTTCGCCGACTTTTAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5650:2181..7354-

>mRNA_Ecto-sp13_S_contig5650.15998.1 ID=mRNA_Ecto-sp13_S_contig5650.15998.1|Name=mRNA_Ecto-sp13_S_contig5650.15998.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1149bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5650:2181..7354- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCTCTGTCCGCGTGTCGCCATGCCGTGCGCCACCGTGGCTCAATCAT
TCTTCTCCGACACAGTGGCACCGCAGCAGCTTCGAAGCAGAAGCCGATCG
CCGTGATAAAACCAGCAGCAGGGACAATCTCGGATGCTCGCCATGCGTAT
AACAGCTCAGCGCGGTGGCAACAGCAAGCGGCAGCCGGGCAGGAAGAGGA
AGGGTGGACTGGAGGCGACGGCGGCGAACGAGGAGGCCATGCAGGAGCTA
GAATACTCGGCATTGTTGTGTTCTCGTCCCTTGTAGGAGCTACGGCATGC
CTGGGAACGTGGCAGGCGATGCGCTACTCGTGGAAGCTGGACTTGATCGA
AAGCAGGAGGGCCAGAATGGATTTCGAGCCCGTCGATCTTCCTGAAGGCC
TAGAAGGCGCCGCGCTGGCTACGATGATGGATGTCTTGGACAAGGAAGCG
GATGGGAAGGCGTCGAAGGGGCCAAACGGAGAGACTCTGGGGGGGAGTGA
GGAGGGTAAAGGTTTGCTCGAGAGTCTGGAGGGCAGGCGGTTGCGGGTGA
CCGGGGTTTTCGATCACGGCAAGGAGGTGCTAGTCGGACCGAGAGGCGCT
CCACCAGGAATGAAGGCAACGTCGGGACCGTCGTCCATGGCCCCGAGCCC
CATGGGCGACTTCGTCCACACCCCGCTCAAGAGGGCAGACGGCTCCGTGG
TGCTCGTGAACAGGGGATGGGTACCTCGCTCCAAGGGGCTCCAATGGTCT
CGCCCGGAGGGAGAAGTCACCATGGTTGGCGTCCTGAAGGCCGCGGAGAA
GCGGTCCACGTTTTCTCCTGACAACAAGCCCGAGACCCGCCACCTGCTAT
GGGCGGAGAAGGCTGCGCTGCTGCAGGCGGCGGGGTTGGGCCAACACGGG
GCCGAGGAGGGGGTGCAGTCGATGCCCATATTGATGGAAGCGGTCGGCGA
AGAGGACGGCGACAAGAAGACCATGCCCATGGCGAAGAAGCCTCAACACT
TCGGGGATTTCTACGTCACGCCTCAGACTCACCTCATGTACTCGGCCACC
TGGTACGCCCTCGCGGCTGCGGGCTGCGCGCTCACGTGGGCGAGATTTCG
CAGGAGAGGGCCGGCCGCGTTTCCAACGGCCAAGCCTCCGGGACTTTGA
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