mRNA_Ecto-sp13_S_contig56385.15981.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig56385.15981.1 vs. uniprot
Match: D8LRH6_ECTSI (Ornithine cyclodeaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRH6_ECTSI) HSP 1 Score: 156 bits (394), Expect = 2.240e-44 Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 1
Query: 1 ENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVGKTKEWADEIEAELGYKV 237
ENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDV KTKEWADEIEAELGYKV
Sbjct: 161 ENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVVKTKEWADEIEAELGYKV 239
BLAST of mRNA_Ecto-sp13_S_contig56385.15981.1 vs. uniprot
Match: A0A7S2XZG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZG6_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.380e-37 Identity = 66/105 (62.86%), Postives = 83/105 (79.05%), Query Frame = 1
Query: 1 ENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVGKTKEWADEIEAELGYKVHVCKSAEECVRQSDVVFTQTPGSETV 315
ENR+LTDLRTGAAGA+SVK+F A+ H KV F+GAGVIA AMAR S CVH+F EGFAYGLD +T+ + E+ +ELG+ VC++AEE VR +DV+FTQT G+ V
Sbjct: 138 ENRYLTDLRTGAAGAISVKNFVAKEHTKVAFIGAGVIAQAMARASSCVHKFTEGFAYGLDTAQTEGFVSEMSSELGFPFKVCETAEEAVRSADVIFTQTTGAAPV 242
BLAST of mRNA_Ecto-sp13_S_contig56385.15981.1 vs. uniprot
Match: A0A7S2RSZ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSZ5_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.140e-36 Identity = 66/105 (62.86%), Postives = 83/105 (79.05%), Query Frame = 1
Query: 1 ENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVGKTKEWADEIEAELGYKVHVCKSAEECVRQSDVVFTQTPGSETV 315
ENR+LTDLRTGAAGA+SVKHFA+ HKKV F+G GVIA AMAR + +H+FD+GFA+GLD G ++AD I ++LGY V VC +AEE VR +DV+FTQT G+ V
Sbjct: 185 ENRYLTDLRTGAAGAISVKHFASPKHKKVAFIGTGVIAQAMARATNTLHQFDQGFAFGLDDGMNAQFADTIHSQLGYPVQVCATAEEAVRSADVIFTQTTGANHV 289
BLAST of mRNA_Ecto-sp13_S_contig56385.15981.1 vs. uniprot
Match: A0A7S0H4T2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H4T2_9EUKA) HSP 1 Score: 130 bits (326), Expect = 3.030e-34 Identity = 67/109 (61.47%), Postives = 82/109 (75.23%), Query Frame = 1
Query: 1 ENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVGKTKEWADEIEAELGYKVHVCKSAEECVRQSDVVFTQTPGSETVRRVG 327
ENR+LTDLRTGAAGAVSVKHFAA+ H KV F+G G+IA AMAR S VH + E +GLD +T+ + DE+EAEL + VCKSAEE V SDV+FTQTP ++TV +G
Sbjct: 137 ENRYLTDLRTGAAGAVSVKHFAAKDHTKVCFLGTGMIAGAMARASSEVHGWTEANCFGLDEAQTQRFCDEMEAELKFPFKVCKSAEEAVGSSDVIFTQTPAAQTVLELG 245
BLAST of mRNA_Ecto-sp13_S_contig56385.15981.1 vs. uniprot
Match: A0A7S0H4X0_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H4X0_9EUKA) HSP 1 Score: 124 bits (312), Expect = 3.290e-33 Identity = 64/103 (62.14%), Postives = 78/103 (75.73%), Query Frame = 1
Query: 1 ENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVGKTKEWADEIEAELGYKVHVCKSAEECVRQSDVVFTQTPGSE 309
ENR+LTDLRTGAAGAVSVKHFAA+ H KV F+G G+IA AMAR S VH + E +GLD +T+ + DE+EAEL + VCKSAEE V SDV+FTQTP ++
Sbjct: 137 ENRYLTDLRTGAAGAVSVKHFAAKDHTKVCFLGTGMIAGAMARASSEVHGWTEANCFGLDEAQTQRFCDEMEAELKFPFKVCKSAEEAVGSSDVIFTQTPAAQ 239
BLAST of mRNA_Ecto-sp13_S_contig56385.15981.1 vs. uniprot
Match: A0A6T5N8F9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5N8F9_HETAK) HSP 1 Score: 126 bits (316), Expect = 9.410e-33 Identity = 64/106 (60.38%), Postives = 77/106 (72.64%), Query Frame = 1
Query: 1 ENRFLTDLRTGAAGAVSVKHFAAR-HHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVGKTKEWADEIEAELGYKVHVCKSAEECVRQSDVVFTQTPGSETV 315
ENR+LTDLRTGAAGA+SVK+F A HK + F+G G IA +MA+G+ CVH F++GF YGLD + +A EIEA GY V VC +AEE VR DVVFTQT GS V
Sbjct: 139 ENRYLTDLRTGAAGALSVKYFGASPKHKNISFIGTGAIAESMAKGTACVHNFEQGFCYGLDRAMNERFAAEIEATCGYPVKVCDTAEEAVRSGDVVFTQTVGSSVV 244
BLAST of mRNA_Ecto-sp13_S_contig56385.15981.1 vs. uniprot
Match: C1E6G7_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1E6G7_MICCC) HSP 1 Score: 124 bits (311), Expect = 4.150e-31 Identity = 63/105 (60.00%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 1 ENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVGKTKEWADEIEAELGYKVHVCKSAEECVRQSDVVFTQTPGSETV 315
ENR+LTDLRTGAAGAV+VKH A + K V F+G GVIA AMAR S VH F++G+ Y D+ K + D++ AELGY C SAEE VR +DVVFTQTPG E V
Sbjct: 301 ENRYLTDLRTGAAGAVAVKHLAIKDAKSVAFIGTGVIAEAMARSSATVHGFEQGYGYSRDMTKNSAFCDKMSAELGYAFTPCSSAEEAVRNADVVFTQTPGGEWV 405
BLAST of mRNA_Ecto-sp13_S_contig56385.15981.1 vs. uniprot
Match: A0A7S0NJ63_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0NJ63_MICPS) HSP 1 Score: 124 bits (311), Expect = 9.240e-31 Identity = 63/105 (60.00%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 1 ENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVGKTKEWADEIEAELGYKVHVCKSAEECVRQSDVVFTQTPGSETV 315
ENR+LTDLRTGAAGAV+VKH A + K V F+G GVIA AMAR S VH F++G+ Y D+ K + D++ AELGY C SAEE VR +DVVFTQTPG E V
Sbjct: 301 ENRYLTDLRTGAAGAVAVKHLAIKDAKSVAFIGTGVIAEAMARSSATVHGFEQGYGYSRDMTKNSAFCDKMSAELGYAFTPCSSAEEAVRNADVVFTQTPGGEWV 405
BLAST of mRNA_Ecto-sp13_S_contig56385.15981.1 vs. uniprot
Match: A0A7S0KS13_MICPS (Threonine ammonia-lyase n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KS13_MICPS) HSP 1 Score: 124 bits (311), Expect = 1.070e-30 Identity = 63/105 (60.00%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 1 ENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVGKTKEWADEIEAELGYKVHVCKSAEECVRQSDVVFTQTPGSETV 315
ENR+LTDLRTGAAGAV+VKH A + K V F+G GVIA AMAR S VH F++G+ Y D+ K + D++ AELGY C SAEE VR +DVVFTQTPG E V
Sbjct: 673 ENRYLTDLRTGAAGAVAVKHLAIKDAKSVAFIGTGVIAEAMARSSATVHGFEQGYGYSRDMTKNSAFCDKMSAELGYAFTPCSSAEEAVRNADVVFTQTPGGEWV 777
BLAST of mRNA_Ecto-sp13_S_contig56385.15981.1 vs. uniprot
Match: C1MM99_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MM99_MICPC) HSP 1 Score: 116 bits (291), Expect = 3.800e-29 Identity = 57/105 (54.29%), Postives = 74/105 (70.48%), Query Frame = 1
Query: 1 ENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVGKTKEWADEIEAELGYKVHVCKSAEECVRQSDVVFTQTPGSETV 315
ENR+LTD+RTGAAGAV VKH A + K V F+G GVIA +MAR + V+ F++G+ Y ++ K + D+++ ELGY C SAEE VR +DVVFTQTPG E V
Sbjct: 133 ENRYLTDMRTGAAGAVCVKHLAVKGAKSVAFIGTGVIAESMARSTATVYGFEQGYGYSRNIDKATAFCDKMQKELGYDFKACDSAEEAVRNADVVFTQTPGGEWV 237 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56385.15981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig56385.15981.1 >prot_Ecto-sp13_S_contig56385.15981.1 ID=prot_Ecto-sp13_S_contig56385.15981.1|Name=mRNA_Ecto-sp13_S_contig56385.15981.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=114bp ENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEback to top mRNA from alignment at Ecto-sp13_S_contig56385:542..883+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig56385.15981.1 ID=mRNA_Ecto-sp13_S_contig56385.15981.1|Name=mRNA_Ecto-sp13_S_contig56385.15981.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=342bp|location=Sequence derived from alignment at Ecto-sp13_S_contig56385:542..883+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig56385:542..883+ >mRNA_Ecto-sp13_S_contig56385.15981.1 ID=mRNA_Ecto-sp13_S_contig56385.15981.1|Name=mRNA_Ecto-sp13_S_contig56385.15981.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=342bp|location=Sequence derived from alignment at Ecto-sp13_S_contig56385:542..883+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |