mRNA_Ecto-sp13_S_contig56354.15975.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig56354.15975.1 vs. uniprot
Match: A0A6H5KYW9_9PHAE (CULLIN_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW9_9PHAE) HSP 1 Score: 172 bits (435), Expect = 4.770e-48 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 1
Query: 1 AENALEAEKLRVANYLNPSTEAKLLRVCDDEMLEKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEV 264
AENALEAEKLRVANYLNPSTEAKLLRVCDDEMLEKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITE+
Sbjct: 233 AENALEAEKLRVANYLNPSTEAKLLRVCDDEMLEKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEM 320
BLAST of mRNA_Ecto-sp13_S_contig56354.15975.1 vs. uniprot
Match: A0A7S3UPV7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPV7_HETAK) HSP 1 Score: 124 bits (311), Expect = 4.910e-33 Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 1
Query: 1 AENALEAEKLRVANYLNPSTEAKLLRVCDDEMLEKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHI 255
AE ALE E+ RVANYLNPSTEAKLLRV D E+LEKRE +LLEKEGSGC+ LLANDK++DL+RMYRLF+R+P GL PMA I + +
Sbjct: 43 AERALEEERQRVANYLNPSTEAKLLRVVDQELLEKRESVLLEKEGSGCRALLANDKAEDLARMYRLFSRVPDGLAPMAAIAQQFV 127
BLAST of mRNA_Ecto-sp13_S_contig56354.15975.1 vs. uniprot
Match: A0A835YLK2_9STRA (Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK2_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.310e-31 Identity = 60/86 (69.77%), Postives = 75/86 (87.21%), Query Frame = 1
Query: 1 AENALEAEKLRVANYLNPSTEAKLLRVCDDEMLEKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHIT 258
AE AL+ E+ RV +YLN +TE KLLRVCD EMLEK + LLEKEGSGC+VLLANDKS+DLSRM+RLF+R+P+GL+PMA I+++HIT
Sbjct: 235 AEAALDCERARVGHYLNAATEPKLLRVCDREMLEKHQTELLEKEGSGCRVLLANDKSEDLSRMFRLFSRIPQGLQPMANIVREHIT 320
BLAST of mRNA_Ecto-sp13_S_contig56354.15975.1 vs. uniprot
Match: A0A7S3JSF7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSF7_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.830e-30 Identity = 59/85 (69.41%), Postives = 73/85 (85.88%), Query Frame = 1
Query: 1 AENALEAEKLRVANYLNPSTEAKLLRVCDDEMLEKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHI 255
AE ALEAEK RVANYLN S+E KLLRVC+ E+LEKRE LLEK+GSGC+ LLAND+++DL+RM+RLF+R+P GL PMA ++K HI
Sbjct: 231 AEKALEAEKQRVANYLNSSSEPKLLRVCESELLEKRETSLLEKDGSGCRALLANDRANDLARMFRLFSRVPNGLPPMAALVKAHI 315
BLAST of mRNA_Ecto-sp13_S_contig56354.15975.1 vs. uniprot
Match: A0A7R9ZBG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBG0_9STRA) HSP 1 Score: 118 bits (295), Expect = 6.330e-29 Identity = 58/88 (65.91%), Postives = 75/88 (85.23%), Query Frame = 1
Query: 1 AENALEAEKLRVANYLNPSTEAKLLRVCDDEMLEKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEV 264
AE AL EK RVA+YLNP++E+KLLRVC++E+LEK E +LLEKEGSGC+VLLANDKS+DL RM+ LF+RL KGL PMA+I++ I+ +
Sbjct: 271 AERALIEEKNRVADYLNPASESKLLRVCEEEILEKVEMVLLEKEGSGCRVLLANDKSEDLRRMFHLFSRLDKGLNPMADIVEKFISSM 358
BLAST of mRNA_Ecto-sp13_S_contig56354.15975.1 vs. uniprot
Match: F0XVV7_AURAN (CULLIN_2 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVV7_AURAN) HSP 1 Score: 118 bits (296), Expect = 6.340e-29 Identity = 58/85 (68.24%), Postives = 72/85 (84.71%), Query Frame = 1
Query: 1 AENALEAEKLRVANYLNPSTEAKLLRVCDDEMLEKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHI 255
AE AL+AEK RVA+YLN ++E KLLRVC+ E+LE RE +LLEKEGSGC+ LLANDK+ DLSRMYRLF+R+P GL PMA +++ HI
Sbjct: 231 AEVALDAEKARVAHYLNSASEPKLLRVCEHEILELRETVLLEKEGSGCRALLANDKAADLSRMYRLFSRVPNGLPPMAALVRAHI 315
BLAST of mRNA_Ecto-sp13_S_contig56354.15975.1 vs. uniprot
Match: A0A7S4ILC2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ILC2_9STRA) HSP 1 Score: 118 bits (295), Expect = 8.650e-29 Identity = 58/88 (65.91%), Postives = 75/88 (85.23%), Query Frame = 1
Query: 1 AENALEAEKLRVANYLNPSTEAKLLRVCDDEMLEKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEV 264
AE AL EK RVA+YLNP++E+KLLRVC++E+LEK E +LLEKEGSGC+VLLANDKS+DL RM+ LF+RL KGL PMA+I++ I+ +
Sbjct: 237 AERALIEEKNRVADYLNPASESKLLRVCEEEILEKVEMVLLEKEGSGCRVLLANDKSEDLRRMFHLFSRLDKGLNPMADIVEKFISSM 324
BLAST of mRNA_Ecto-sp13_S_contig56354.15975.1 vs. uniprot
Match: A0A7S1B6G2_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B6G2_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.200e-28 Identity = 59/96 (61.46%), Postives = 77/96 (80.21%), Query Frame = 1
Query: 1 AENALEAEKLRVANYLNPSTEAKLLRVCDDEMLEKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEVRRFRVQAR 288
AE AL EK RVA+YLNPS+EAK+L+VC++E+LE+ E +LLEKEGSGCKVLLAN+K+DDL RM+RLF R+ GL PMA I++ I+E+ V+ R
Sbjct: 232 AEKALANEKARVADYLNPSSEAKILKVCEEEILEEVEMVLLEKEGSGCKVLLANNKADDLRRMFRLFARIDNGLVPMANIVQVFISEIGHEHVKGR 327
BLAST of mRNA_Ecto-sp13_S_contig56354.15975.1 vs. uniprot
Match: A0A7S1VSX6_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VSX6_9STRA) HSP 1 Score: 112 bits (281), Expect = 6.760e-27 Identity = 56/88 (63.64%), Postives = 72/88 (81.82%), Query Frame = 1
Query: 1 AENALEAEKLRVANYLNPSTEAKLLRVCDDEMLEKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEV 264
AE AL E+ RV +YLN S+E KLL+VC++E+LEK E+ LLEKEGSGC+VLLANDKS+DL RM+RLF+RL GL PMA I++ IT++
Sbjct: 232 AEVALNDERTRVGDYLNASSETKLLKVCEEEILEKVERPLLEKEGSGCRVLLANDKSEDLKRMFRLFSRLENGLNPMATIVQTFITDM 319
BLAST of mRNA_Ecto-sp13_S_contig56354.15975.1 vs. uniprot
Match: A0A4D9DID3_9STRA (CULLIN_2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DID3_9STRA) HSP 1 Score: 112 bits (281), Expect = 6.790e-27 Identity = 57/85 (67.06%), Postives = 69/85 (81.18%), Query Frame = 1
Query: 1 AENALEAEKLRVANYLNPSTEAKLLRVCDDEMLEKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHI 255
AE ALE EK RVANYLN TE KLL+V +E+LEK+E LLE+EGSGC +LL NDK +DLSRMYRLF+R+P GL PMA+I++ HI
Sbjct: 234 AEAALEEEKARVANYLNAETEEKLLKVVIEELLEKQETTLLEREGSGCAMLLTNDKYEDLSRMYRLFSRVPSGLLPMAKIVQAHI 318 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56354.15975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig56354.15975.1 >prot_Ecto-sp13_S_contig56354.15975.1 ID=prot_Ecto-sp13_S_contig56354.15975.1|Name=mRNA_Ecto-sp13_S_contig56354.15975.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=100bp AENALEAEKLRVANYLNPSTEAKLLRVCDDEMLEKREKILLEKEGSGCKVback to top mRNA from alignment at Ecto-sp13_S_contig56354:9..618+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig56354.15975.1 ID=mRNA_Ecto-sp13_S_contig56354.15975.1|Name=mRNA_Ecto-sp13_S_contig56354.15975.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=610bp|location=Sequence derived from alignment at Ecto-sp13_S_contig56354:9..618+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig56354:9..618+ >mRNA_Ecto-sp13_S_contig56354.15975.1 ID=mRNA_Ecto-sp13_S_contig56354.15975.1|Name=mRNA_Ecto-sp13_S_contig56354.15975.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=300bp|location=Sequence derived from alignment at Ecto-sp13_S_contig56354:9..618+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |