mRNA_Ecto-sp13_S_contig56306.15971.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: A0A6H5JBU8_9PHAE (GT64 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBU8_9PHAE) HSP 1 Score: 506 bits (1303), Expect = 6.510e-180 Identity = 240/242 (99.17%), Postives = 242/242 (100.00%), Query Frame = 1
Query: 1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRRKVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVKVYPMYTGLLSWL 726
RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRRKVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFF+EEFGDMPLLESSVKVYPM+TGLLSWL
Sbjct: 108 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRRKVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFAEEFGDMPLLESSVKVYPMHTGLLSWL 349
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: A0A835YNL3_9STRA (Exostosin (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL3_9STRA) HSP 1 Score: 256 bits (653), Expect = 1.180e-82 Identity = 124/235 (52.77%), Postives = 156/235 (66.38%), Query Frame = 1
Query: 1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRRKVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAP--LLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVKVYP 699
RND LKRS ++ A C V +IQ+VWSDQEN PP ++ F+ R + FE+H T+SL++RFN S T+GVFS DDD+ C DLKF +TWRA+ TMVGF PRLVTRD TG H YRSW WNG YN++LTK FLHR HL Y MT P +LAY+D HRNCEDIAMS+VVA+ + PP+WV G ++E+G GIS H+ AR C+D F++ G L + K P
Sbjct: 11 RNDDLKRSVDNYALCPAVTRIQIVWSDQENEPPPLNFFSPAARELIEFELHTTDSLNNRFNALSPPPTEGVFSVDDDMLFKCEDLKFAHQTWRAASETMVGFVPRLVTRDEETGEHRYRSWWFTWWNGAYNLVLTKAAFLHRKHLDAY---MTLPPKMLAYVDAHRNCEDIAMSMVVARDTRAPPLWVRGAIRELGAPGISSSGGHYRARCACLDAFAQVLGGTHLQLGTAKAVP 242
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: A0A7N0THD0_KALFE (Glyco_transf_64 domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0THD0_KALFE) HSP 1 Score: 203 bits (516), Expect = 8.670e-61 Identity = 104/244 (42.62%), Postives = 148/244 (60.66%), Query Frame = 1
Query: 1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDL---------FTERTRRKVV--FEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGT---GRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVK 690
R DLLKRS H ASC + I +VWS+ PPS L R RKV F++H +SL++RF L TD VFS DDD+ C+ + F F W+++ +TMVGF PR+ D + G+ Y+ W V W G Y+++LTK FLH+ +L+ Y +++ + + YI ++RNCEDIAMS +VA +PP+WV G++ EIG GIS L H + RS CV++F+ EFG MPL+ +S+K
Sbjct: 78 RYDLLKRSVSHYASCSKIDSIHIVWSEPN--PPSEGLKRFLSRVVTINSRKSRKVELKFDIHKEDSLNNRFKEIKDLTTDAVFSIDDDIIFPCSSVDFAFTVWQSAPDTMVGFVPRMHWIDQTSDTSGQFVYKGWWSVWWRGTYSMVLTKAAFLHKKYLKLYTNDLPSSIKEYITKNRNCEDIAMSFLVANVTGSPPIWVQGKINEIGSTGISSLGGHTEKRSECVNWFAAEFGRMPLVPTSLK 319
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: UPI0012638A9A (glycosyltransferase family 64 protein C4 n=3 Tax=Anacardiaceae TaxID=4011 RepID=UPI0012638A9A) HSP 1 Score: 199 bits (505), Expect = 3.680e-59 Identity = 101/241 (41.91%), Postives = 147/241 (61.00%), Query Frame = 1
Query: 1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDL------FTERTRRK-----VVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVK 690
R DLLK S H ASC + I +VWS+ + PPS L E+ R+ + F++++ +SL++RF L D VFS DDD+ C+ +KF F+ W+++ +TMVGF PR +D TG + Y W V W G Y+++L+K F H+ +LR Y EM A + Y+ ++RNCEDIAMS +VA +PP+WV G++ EIG GIS + H + R+ CV+ F+ EFG MPL+ +SVK
Sbjct: 80 RYDLLKESISHYASCPGLDSIHIVWSEPD--PPSKSLKKNLYNVVEKNSRQGRRVELRFDINEEDSLNNRFKEIKDLEADAVFSIDDDVIFPCSSVKFAFDVWQSAPDTMVGFVPRNHWKDD-TGNYIYGGWWSVWWTGTYSMVLSKAAFFHKKYLRVYTKEMPASIREYVTKNRNCEDIAMSFLVANVTGSPPIWVKGKIYEIGSTGISSMGGHTEKRTQCVNRFAAEFGRMPLVSTSVK 317
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: A0A6J1JG04_CUCMA (glycosyltransferase family 64 protein C4 n=4 Tax=Cucurbita TaxID=3660 RepID=A0A6J1JG04_CUCMA) HSP 1 Score: 199 bits (505), Expect = 3.790e-59 Identity = 103/243 (42.39%), Postives = 144/243 (59.26%), Query Frame = 1
Query: 1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRR---------KVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGT---GRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDM-PLLESSVK 690
R+DLLK+S H +C V I +VWS+ + P S+ F +RT + K+ FE+++ +SL++RF L TD +FS DDD+ +C+ L+F F W+++ TMVGF PR+ D GR+ Y W V W G Y+++L+K F H +L Y M A + Y+ ++RNCEDIAMS VVA PPVWV GR+ EIG GIS L H + R CV+ F EE+G M PL+ S+VK
Sbjct: 76 RHDLLKQSVSHYTTCMGVESIHIVWSEPDPPPDSLVAFLQRTVKENSRNDREIKLRFEMNEEDSLNNRFKEIKDLNTDAIFSVDDDVIFACSTLEFAFTVWQSASETMVGFVPRMHWIDQAKEEMGRYIYGGWWSVWWTGTYSMVLSKAAFFHSKYLGIYTHHMPASIRNYVTKNRNCEDIAMSFVVANVSGAPPVWVKGRIYEIGSGGISSLGGHSERRGKCVNTFVEEYGGMMPLVPSTVK 318
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: UPI0019D67716 (glycosylinositol phosphorylceramide mannosyl transferase 1-like n=2 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D67716) HSP 1 Score: 199 bits (506), Expect = 4.640e-59 Identity = 102/236 (43.22%), Postives = 146/236 (61.86%), Query Frame = 1
Query: 1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSM--DLFTERTRRKVV-FEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLV-TRDP--GTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVK 690
R+ LL+RS H A+C V + VVWS+ P ++ + TRR V FE+++ +SL++RF +LGTD VFS DDDL + C+ L+F F+ W+++ + MVGF PR+ DP T + Y SW V W G Y+++L+K F HR +L Y + M + Y+DE+RNCEDIAMS +VA PP+WV GR+ EIG GIS L H RS C++ F+ +G MPL+ ++VK
Sbjct: 103 RHALLRRSVAHYAACAGVEAVHVVWSEPRPPPETLRRGVLVNGTRRGTVRFEINEADSLNNRFRPIRSLGTDAVFSVDDDLIVPCSTLRFAFDVWQSAPSAMVGFVPRMHWLADPRGSTKEYRYGSWWSVWWTGTYSMVLSKASFFHRQYLDLYTNNMLPSIRKYVDENRNCEDIAMSFLVANHSGAPPIWVQGRIFEIGSTGISSLKGHSLQRSRCLNTFAAMYGHMPLVATTVK 338
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: A0A6A2WPE3_HIBSY (Glycosyltransferase family 64 protein C4 n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WPE3_HIBSY) HSP 1 Score: 198 bits (504), Expect = 5.650e-59 Identity = 94/241 (39.00%), Postives = 146/241 (60.58%), Query Frame = 1
Query: 1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRR---------KVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRL--VTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVK 690
R DLLK+S H ASC + I +VWS+ + S+ + R ++VF+++ +SL++RF L TD VFS DDD+ C+ ++F F W+++ +TMVG+ PR+ V + G ++ Y W W G Y+++L+K F H+ +L+ Y DEM A + YI ++RNCEDIAMS +VA +PP+WV G++ EIG GIS L H + R+ C++ F +EFG MPL+ +++K
Sbjct: 80 RYDLLKKSISHYASCPLLDSIHIVWSEPDPPSDSLKRYLSHVMRLSSRKDQQVELVFDINKEDSLNNRFKEIKDLKTDAVFSIDDDIIFPCSSVEFAFTVWQSAPDTMVGYVPRMHWVDQKKGNDKYRYGGWWSTWWTGTYSMVLSKAAFFHKKYLKLYTDEMPASIKEYITKNRNCEDIAMSFLVANATSSPPIWVKGKIYEIGSTGISSLGSHGERRTECINKFVDEFGRMPLVPANMK 320
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: A0A7J9F898_9ROSI (Glyco_transf_64 domain-containing protein n=1 Tax=Gossypium trilobum TaxID=34281 RepID=A0A7J9F898_9ROSI) HSP 1 Score: 196 bits (499), Expect = 6.210e-59 Identity = 96/241 (39.83%), Postives = 143/241 (59.34%), Query Frame = 1
Query: 1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRR---------KVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRL--VTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVK 690
R DLLK+S H SC + I +VWS+ + S+ + R ++VF+++ +SL++RF L TD VFS DDD+ C ++F F W+++ +TMVG+ PR+ V + G ++ Y W V W G Y+++L+K F H+ +L+ Y DEM A L YI ++RNCEDIAMS +VA PP+WV G++ EIG GIS L H + R+ CV+ F +EFG MPL+ + +K
Sbjct: 23 RYDLLKKSISHYTSCPRLDSIHIVWSEPDPPSDSLKRYLNHVMRSNSRKDQQVELVFDINKEDSLNNRFKEIKDLKTDAVFSIDDDVIFPCTSVEFAFTVWQSASDTMVGYVPRMHWVDQKKGENKYKYGGWWSVWWTGTYSMVLSKAAFFHKKYLKLYTDEMPASLKEYITKNRNCEDIAMSFLVANATDAPPIWVKGKIFEIGSTGISSLGGHSERRTECVNKFVDEFGRMPLVPTVMK 263
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: UPI000C1CED14 (glycosyltransferase family 64 protein C4-like isoform X1 n=3 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CED14) HSP 1 Score: 198 bits (503), Expect = 7.150e-59 Identity = 101/244 (41.39%), Postives = 143/244 (58.61%), Query Frame = 1
Query: 1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDL-----------FTERTRRKVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGR---HSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVK 690
RNDLLK+S H ASC +G I +VWS+ + PPS L F + ++ F+++ +SL++RF TD VFS DDD+ C ++F F W +Q+TMVGF PRL D G + YR W V W G Y+++L+K F H+ +L Y M + + Y+ ++RNCEDIAMS +VA PP+WV G++ EIG GIS L H + RS+CV+ F+ E+G MPL+ +SVK
Sbjct: 75 RNDLLKQSISHYASCPGLGSIHIVWSEPD--PPSDSLIKFLNHVIQSDFKDGREIELKFDINKEDSLNNRFKEIKDFKTDAVFSIDDDIIFPCTTVEFAFNVWHTAQDTMVGFVPRLHWDDRSKGNRGNYMYRGWWSVWWTGTYSMVLSKAAFFHKKYLNLYTYSMPSSIREYVTKNRNCEDIAMSFLVANATGAPPIWVKGKIFEIGSTGISSLGGHAEKRSHCVNKFAAEYGRMPLVSTSVK 316
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: A0A1Q3AM02_CEPFO (Glyco_transf_64 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3AM02_CEPFO) HSP 1 Score: 197 bits (502), Expect = 1.130e-58 Identity = 101/242 (41.74%), Postives = 145/242 (59.92%), Query Frame = 1
Query: 1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFT---------ERTRRKVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGR---HSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVK 690
R+DLLK+S H +SC + I +VWS+ S+ F + R K+ F++++ +SL++RF L TDGVFS DDD+ C+ ++F F+ W+++ +TMVGF PR D G + Y W V W G Y+++L+K F H+ +L Y +EM A + YI ++RNCEDIAMS +VA PP+WV G++ EIG GIS L H D RS CV+ F+ EFG MPL+ +SVK
Sbjct: 79 RDDLLKQSLAHYSSCGGLDSIHIVWSEPTLPSDSLKEFLYHILQSNSRDGRRVKLKFDINEEDSLNNRFKEIKDLETDGVFSIDDDVIFPCSTVEFAFKVWQSAPDTMVGFVPRRHWIDKSKGNTNWYVYGGWWSVWWTGTYSMVLSKAAFFHKKYLSLYTNEMPASIKEYITKNRNCEDIAMSFLVANETNAPPIWVKGKIFEIGSTGISSLGGHSDMRSQCVNIFAAEFGRMPLVTTSVK 320 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig56306.15971.1 >prot_Ecto-sp13_S_contig56306.15971.1 ID=prot_Ecto-sp13_S_contig56306.15971.1|Name=mRNA_Ecto-sp13_S_contig56306.15971.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRRKVVFEVback to top mRNA from alignment at Ecto-sp13_S_contig56306:174..902- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig56306.15971.1 ID=mRNA_Ecto-sp13_S_contig56306.15971.1|Name=mRNA_Ecto-sp13_S_contig56306.15971.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=729bp|location=Sequence derived from alignment at Ecto-sp13_S_contig56306:174..902- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig56306:174..902- >mRNA_Ecto-sp13_S_contig56306.15971.1 ID=mRNA_Ecto-sp13_S_contig56306.15971.1|Name=mRNA_Ecto-sp13_S_contig56306.15971.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=729bp|location=Sequence derived from alignment at Ecto-sp13_S_contig56306:174..902- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |