mRNA_Ecto-sp13_S_contig56306.15971.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig56306.15971.1
Unique NamemRNA_Ecto-sp13_S_contig56306.15971.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: A0A6H5JBU8_9PHAE (GT64 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBU8_9PHAE)

HSP 1 Score: 506 bits (1303), Expect = 6.510e-180
Identity = 240/242 (99.17%), Postives = 242/242 (100.00%), Query Frame = 1
Query:    1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRRKVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVKVYPMYTGLLSWL 726
            RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRRKVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFF+EEFGDMPLLESSVKVYPM+TGLLSWL
Sbjct:  108 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRRKVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFAEEFGDMPLLESSVKVYPMHTGLLSWL 349          
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: A0A835YNL3_9STRA (Exostosin (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL3_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.180e-82
Identity = 124/235 (52.77%), Postives = 156/235 (66.38%), Query Frame = 1
Query:    1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRRKVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAP--LLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVKVYP 699
            RND LKRS ++ A C  V +IQ+VWSDQEN PP ++ F+   R  + FE+H T+SL++RFN  S   T+GVFS DDD+   C DLKF  +TWRA+  TMVGF PRLVTRD  TG H YRSW    WNG YN++LTK  FLHR HL  Y   MT P  +LAY+D HRNCEDIAMS+VVA+  + PP+WV G ++E+G  GIS    H+ AR  C+D F++  G   L   + K  P
Sbjct:   11 RNDDLKRSVDNYALCPAVTRIQIVWSDQENEPPPLNFFSPAARELIEFELHTTDSLNNRFNALSPPPTEGVFSVDDDMLFKCEDLKFAHQTWRAASETMVGFVPRLVTRDEETGEHRYRSWWFTWWNGAYNLVLTKAAFLHRKHLDAY---MTLPPKMLAYVDAHRNCEDIAMSMVVARDTRAPPLWVRGAIRELGAPGISSSGGHYRARCACLDAFAQVLGGTHLQLGTAKAVP 242          
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: A0A7N0THD0_KALFE (Glyco_transf_64 domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0THD0_KALFE)

HSP 1 Score: 203 bits (516), Expect = 8.670e-61
Identity = 104/244 (42.62%), Postives = 148/244 (60.66%), Query Frame = 1
Query:    1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDL---------FTERTRRKVV--FEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGT---GRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVK 690
            R DLLKRS  H ASC  +  I +VWS+    PPS  L            R  RKV   F++H  +SL++RF     L TD VFS DDD+   C+ + F F  W+++ +TMVGF PR+   D  +   G+  Y+ W  V W G Y+++LTK  FLH+ +L+ Y +++ + +  YI ++RNCEDIAMS +VA    +PP+WV G++ EIG  GIS L  H + RS CV++F+ EFG MPL+ +S+K
Sbjct:   78 RYDLLKRSVSHYASCSKIDSIHIVWSEPN--PPSEGLKRFLSRVVTINSRKSRKVELKFDIHKEDSLNNRFKEIKDLTTDAVFSIDDDIIFPCSSVDFAFTVWQSAPDTMVGFVPRMHWIDQTSDTSGQFVYKGWWSVWWRGTYSMVLTKAAFLHKKYLKLYTNDLPSSIKEYITKNRNCEDIAMSFLVANVTGSPPIWVQGKINEIGSTGISSLGGHTEKRSECVNWFAAEFGRMPLVPTSLK 319          
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: UPI0012638A9A (glycosyltransferase family 64 protein C4 n=3 Tax=Anacardiaceae TaxID=4011 RepID=UPI0012638A9A)

HSP 1 Score: 199 bits (505), Expect = 3.680e-59
Identity = 101/241 (41.91%), Postives = 147/241 (61.00%), Query Frame = 1
Query:    1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDL------FTERTRRK-----VVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVK 690
            R DLLK S  H ASC  +  I +VWS+ +  PPS  L        E+  R+     + F++++ +SL++RF     L  D VFS DDD+   C+ +KF F+ W+++ +TMVGF PR   +D  TG + Y  W  V W G Y+++L+K  F H+ +LR Y  EM A +  Y+ ++RNCEDIAMS +VA    +PP+WV G++ EIG  GIS +  H + R+ CV+ F+ EFG MPL+ +SVK
Sbjct:   80 RYDLLKESISHYASCPGLDSIHIVWSEPD--PPSKSLKKNLYNVVEKNSRQGRRVELRFDINEEDSLNNRFKEIKDLEADAVFSIDDDVIFPCSSVKFAFDVWQSAPDTMVGFVPRNHWKDD-TGNYIYGGWWSVWWTGTYSMVLSKAAFFHKKYLRVYTKEMPASIREYVTKNRNCEDIAMSFLVANVTGSPPIWVKGKIYEIGSTGISSMGGHTEKRTQCVNRFAAEFGRMPLVSTSVK 317          
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: A0A6J1JG04_CUCMA (glycosyltransferase family 64 protein C4 n=4 Tax=Cucurbita TaxID=3660 RepID=A0A6J1JG04_CUCMA)

HSP 1 Score: 199 bits (505), Expect = 3.790e-59
Identity = 103/243 (42.39%), Postives = 144/243 (59.26%), Query Frame = 1
Query:    1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRR---------KVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGT---GRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDM-PLLESSVK 690
            R+DLLK+S  H  +C  V  I +VWS+ +  P S+  F +RT +         K+ FE+++ +SL++RF     L TD +FS DDD+  +C+ L+F F  W+++  TMVGF PR+   D      GR+ Y  W  V W G Y+++L+K  F H  +L  Y   M A +  Y+ ++RNCEDIAMS VVA     PPVWV GR+ EIG  GIS L  H + R  CV+ F EE+G M PL+ S+VK
Sbjct:   76 RHDLLKQSVSHYTTCMGVESIHIVWSEPDPPPDSLVAFLQRTVKENSRNDREIKLRFEMNEEDSLNNRFKEIKDLNTDAIFSVDDDVIFACSTLEFAFTVWQSASETMVGFVPRMHWIDQAKEEMGRYIYGGWWSVWWTGTYSMVLSKAAFFHSKYLGIYTHHMPASIRNYVTKNRNCEDIAMSFVVANVSGAPPVWVKGRIYEIGSGGISSLGGHSERRGKCVNTFVEEYGGMMPLVPSTVK 318          
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: UPI0019D67716 (glycosylinositol phosphorylceramide mannosyl transferase 1-like n=2 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D67716)

HSP 1 Score: 199 bits (506), Expect = 4.640e-59
Identity = 102/236 (43.22%), Postives = 146/236 (61.86%), Query Frame = 1
Query:    1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSM--DLFTERTRRKVV-FEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLV-TRDP--GTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVK 690
            R+ LL+RS  H A+C  V  + VVWS+    P ++   +    TRR  V FE+++ +SL++RF    +LGTD VFS DDDL + C+ L+F F+ W+++ + MVGF PR+    DP   T  + Y SW  V W G Y+++L+K  F HR +L  Y + M   +  Y+DE+RNCEDIAMS +VA     PP+WV GR+ EIG  GIS L  H   RS C++ F+  +G MPL+ ++VK
Sbjct:  103 RHALLRRSVAHYAACAGVEAVHVVWSEPRPPPETLRRGVLVNGTRRGTVRFEINEADSLNNRFRPIRSLGTDAVFSVDDDLIVPCSTLRFAFDVWQSAPSAMVGFVPRMHWLADPRGSTKEYRYGSWWSVWWTGTYSMVLSKASFFHRQYLDLYTNNMLPSIRKYVDENRNCEDIAMSFLVANHSGAPPIWVQGRIFEIGSTGISSLKGHSLQRSRCLNTFAAMYGHMPLVATTVK 338          
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: A0A6A2WPE3_HIBSY (Glycosyltransferase family 64 protein C4 n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WPE3_HIBSY)

HSP 1 Score: 198 bits (504), Expect = 5.650e-59
Identity = 94/241 (39.00%), Postives = 146/241 (60.58%), Query Frame = 1
Query:    1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRR---------KVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRL--VTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVK 690
            R DLLK+S  H ASC  +  I +VWS+ +    S+  +     R         ++VF+++  +SL++RF     L TD VFS DDD+   C+ ++F F  W+++ +TMVG+ PR+  V +  G  ++ Y  W    W G Y+++L+K  F H+ +L+ Y DEM A +  YI ++RNCEDIAMS +VA    +PP+WV G++ EIG  GIS L  H + R+ C++ F +EFG MPL+ +++K
Sbjct:   80 RYDLLKKSISHYASCPLLDSIHIVWSEPDPPSDSLKRYLSHVMRLSSRKDQQVELVFDINKEDSLNNRFKEIKDLKTDAVFSIDDDIIFPCSSVEFAFTVWQSAPDTMVGYVPRMHWVDQKKGNDKYRYGGWWSTWWTGTYSMVLSKAAFFHKKYLKLYTDEMPASIKEYITKNRNCEDIAMSFLVANATSSPPIWVKGKIYEIGSTGISSLGSHGERRTECINKFVDEFGRMPLVPANMK 320          
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: A0A7J9F898_9ROSI (Glyco_transf_64 domain-containing protein n=1 Tax=Gossypium trilobum TaxID=34281 RepID=A0A7J9F898_9ROSI)

HSP 1 Score: 196 bits (499), Expect = 6.210e-59
Identity = 96/241 (39.83%), Postives = 143/241 (59.34%), Query Frame = 1
Query:    1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRR---------KVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRL--VTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVK 690
            R DLLK+S  H  SC  +  I +VWS+ +    S+  +     R         ++VF+++  +SL++RF     L TD VFS DDD+   C  ++F F  W+++ +TMVG+ PR+  V +  G  ++ Y  W  V W G Y+++L+K  F H+ +L+ Y DEM A L  YI ++RNCEDIAMS +VA     PP+WV G++ EIG  GIS L  H + R+ CV+ F +EFG MPL+ + +K
Sbjct:   23 RYDLLKKSISHYTSCPRLDSIHIVWSEPDPPSDSLKRYLNHVMRSNSRKDQQVELVFDINKEDSLNNRFKEIKDLKTDAVFSIDDDVIFPCTSVEFAFTVWQSASDTMVGYVPRMHWVDQKKGENKYKYGGWWSVWWTGTYSMVLSKAAFFHKKYLKLYTDEMPASLKEYITKNRNCEDIAMSFLVANATDAPPIWVKGKIFEIGSTGISSLGGHSERRTECVNKFVDEFGRMPLVPTVMK 263          
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: UPI000C1CED14 (glycosyltransferase family 64 protein C4-like isoform X1 n=3 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CED14)

HSP 1 Score: 198 bits (503), Expect = 7.150e-59
Identity = 101/244 (41.39%), Postives = 143/244 (58.61%), Query Frame = 1
Query:    1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDL-----------FTERTRRKVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGR---HSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVK 690
            RNDLLK+S  H ASC  +G I +VWS+ +  PPS  L           F +    ++ F+++  +SL++RF       TD VFS DDD+   C  ++F F  W  +Q+TMVGF PRL   D   G    + YR W  V W G Y+++L+K  F H+ +L  Y   M + +  Y+ ++RNCEDIAMS +VA     PP+WV G++ EIG  GIS L  H + RS+CV+ F+ E+G MPL+ +SVK
Sbjct:   75 RNDLLKQSISHYASCPGLGSIHIVWSEPD--PPSDSLIKFLNHVIQSDFKDGREIELKFDINKEDSLNNRFKEIKDFKTDAVFSIDDDIIFPCTTVEFAFNVWHTAQDTMVGFVPRLHWDDRSKGNRGNYMYRGWWSVWWTGTYSMVLSKAAFFHKKYLNLYTYSMPSSIREYVTKNRNCEDIAMSFLVANATGAPPIWVKGKIFEIGSTGISSLGGHAEKRSHCVNKFAAEYGRMPLVSTSVK 316          
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Match: A0A1Q3AM02_CEPFO (Glyco_transf_64 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3AM02_CEPFO)

HSP 1 Score: 197 bits (502), Expect = 1.130e-58
Identity = 101/242 (41.74%), Postives = 145/242 (59.92%), Query Frame = 1
Query:    1 RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFT---------ERTRRKVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGR---HSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFSEEFGDMPLLESSVK 690
            R+DLLK+S  H +SC  +  I +VWS+      S+  F          +  R K+ F++++ +SL++RF     L TDGVFS DDD+   C+ ++F F+ W+++ +TMVGF PR    D   G    + Y  W  V W G Y+++L+K  F H+ +L  Y +EM A +  YI ++RNCEDIAMS +VA     PP+WV G++ EIG  GIS L  H D RS CV+ F+ EFG MPL+ +SVK
Sbjct:   79 RDDLLKQSLAHYSSCGGLDSIHIVWSEPTLPSDSLKEFLYHILQSNSRDGRRVKLKFDINEEDSLNNRFKEIKDLETDGVFSIDDDVIFPCSTVEFAFKVWQSAPDTMVGFVPRRHWIDKSKGNTNWYVYGGWWSVWWTGTYSMVLSKAAFFHKKYLSLYTNEMPASIKEYITKNRNCEDIAMSFLVANETNAPPIWVKGKIFEIGSTGISSLGGHSDMRSQCVNIFAAEFGRMPLVTTSVK 320          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56306.15971.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBU8_9PHAE6.510e-18099.17GT64 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A835YNL3_9STRA1.180e-8252.77Exostosin (Fragment) n=1 Tax=Tribonema minus TaxID... [more]
A0A7N0THD0_KALFE8.670e-6142.62Glyco_transf_64 domain-containing protein n=1 Tax=... [more]
UPI0012638A9A3.680e-5941.91glycosyltransferase family 64 protein C4 n=3 Tax=A... [more]
A0A6J1JG04_CUCMA3.790e-5942.39glycosyltransferase family 64 protein C4 n=4 Tax=C... [more]
UPI0019D677164.640e-5943.22glycosylinositol phosphorylceramide mannosyl trans... [more]
A0A6A2WPE3_HIBSY5.650e-5939.00Glycosyltransferase family 64 protein C4 n=2 Tax=H... [more]
A0A7J9F898_9ROSI6.210e-5939.83Glyco_transf_64 domain-containing protein n=1 Tax=... [more]
UPI000C1CED147.150e-5941.39glycosyltransferase family 64 protein C4-like isof... [more]
A0A1Q3AM02_CEPFO1.130e-5841.74Glyco_transf_64 domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig56306contigEcto-sp13_S_contig56306:174..902 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score508.4
Seed ortholog evalue1.8e-141
Seed eggNOG ortholog2880.D7FUU9
Preferred nameEXTL2
Model size729
KEGG koko:K02366,ko:K02367,ko:K02369,ko:K02370,ko:K04794,ko:K19033
KEGG ReactionR05930,R05935,R05936,R10138,R10139
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ModuleM00059
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0001888,GO:0003674,GO:0003824,GO:0005488,GO:0005539,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005783,GO:0005789,GO:0005794,GO:0005802,GO:0005975,GO:0005976,GO:0006040,GO:0006044,GO:0006073,GO:0006139,GO:0006629,GO:0006643,GO:0006665,GO:0006725,GO:0006793,GO:0006807,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008194,GO:0008219,GO:0008375,GO:0008376,GO:0009225,GO:0009664,GO:0009719,GO:0009725,GO:0009737,GO:0009888,GO:0009987,GO:0010033,GO:0010087,GO:0010383,GO:0010393,GO:0010395,GO:0010400,GO:0010401,GO:0012505,GO:0016020,GO:0016043,GO:0016740,GO:0016757,GO:0016758,GO:0017144,GO:0019276,GO:0023052,GO:0030145,GO:0030243,GO:0030968,GO:0031410,GO:0031982,GO:0031984,GO:0032502,GO:0033554,GO:0033993,GO:0034620,GO:0034641,GO:0034976,GO:0035248,GO:0035251,GO:0035966,GO:0035967,GO:0036498,GO:0042175,GO:0042221,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045229,GO:0045488,GO:0046483,GO:0046527,GO:0046872,GO:0046914,GO:0047237,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051273,GO:0051716,GO:0052541,GO:0052546,GO:0055086,GO:0065007,GO:0070887,GO:0071310,GO:0071554,GO:0071555,GO:0071669,GO:0071704,GO:0071840,GO:0097305,GO:0097367,GO:0097708,GO:0098791,GO:0098827,GO:1901071,GO:1901135,GO:1901360,GO:1901564,GO:1901700
Exons1
EggNOG free text desc.glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
EggNOG OGsKOG1022@1,KOG1022@2759
Ec32 ortholog descriptionGlycosyltransferase, family GT64
Ec32 orthologEc-06_001180.1
EC2.4.1.223,2.4.1.224,2.4.1.225,3.1.1.29
Cds size729
COG Functional cat.J
CAZyGT47,GT64
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01003,ko03011,ko03012
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463780.4058287-CDS-Ecto-sp13_S_contig56306:173..9021681463780.4058287-CDS-Ecto-sp13_S_contig56306:173..902Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig56306 174..902 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig56306.15971.1prot_Ecto-sp13_S_contig56306.15971.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig56306 174..902 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig56306.15971.1

>prot_Ecto-sp13_S_contig56306.15971.1 ID=prot_Ecto-sp13_S_contig56306.15971.1|Name=mRNA_Ecto-sp13_S_contig56306.15971.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp
RNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRRKVVFEV
HDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMV
GFSPRLVTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVD
EMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISG
LAHHFDARSNCVDFFSEEFGDMPLLESSVKVYPMYTGLLSWL*
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mRNA from alignment at Ecto-sp13_S_contig56306:174..902-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig56306.15971.1 ID=mRNA_Ecto-sp13_S_contig56306.15971.1|Name=mRNA_Ecto-sp13_S_contig56306.15971.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=729bp|location=Sequence derived from alignment at Ecto-sp13_S_contig56306:174..902- (Ectocarpus species13 EcNAP12_S_4_19m)
CGCAACGACCTGCTCAAGAGAAGCGCGGAGCACCTCGCGTCCTGCGACTG CGTCGGCCAGATCCAGGTCGTCTGGTCGGACCAAGAAAACGCTCCTCCTA GCATGGACCTCTTCACCGAACGAACCCGAAGAAAGGTAGTCTTCGAGGTG CACGACACCAACAGCCTGAGCCATCGCTTCAACGTCACGTCGACCTTGGG CACCGACGGTGTGTTCTCCACGGACGACGACCTCGAGATCTCGTGCGCGG ACCTGAAGTTCGGGTTCGAGACATGGCGGGCCAGCCAGAACACCATGGTC GGCTTCTCGCCGCGGCTGGTGACACGCGACCCGGGGACGGGGCGCCACTC GTACCGGTCTTGGAGGGTGGTGCGCTGGAACGGGGTGTACAACGTGATCC TGACCAAGTGCTGCTTCCTGCACCGGGACCACCTGCGGACGTACGTGGAC GAGATGACCGCGCCGCTCCTGGCGTACATCGACGAGCACCGGAACTGCGA GGACATCGCCATGTCGGTGGTGGTGGCCAAGTTCCACAAGACTCCCCCCG TGTGGGTCGGCGGGAGGGTGAAGGAGATCGGAGGGGACGGGATCAGCGGC TTGGCGCACCACTTCGACGCGCGCAGCAACTGCGTGGACTTCTTCTCCGA GGAGTTCGGAGACATGCCGCTGTTGGAATCTTCCGTCAAGGTGTACCCCA TGTACACTGGCCTGCTGTCGTGGCTGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig56306:174..902-

>mRNA_Ecto-sp13_S_contig56306.15971.1 ID=mRNA_Ecto-sp13_S_contig56306.15971.1|Name=mRNA_Ecto-sp13_S_contig56306.15971.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=729bp|location=Sequence derived from alignment at Ecto-sp13_S_contig56306:174..902- (Ectocarpus species13 EcNAP12_S_4_19m)
CGCAACGACCTGCTCAAGAGAAGCGCGGAGCACCTCGCGTCCTGCGACTG
CGTCGGCCAGATCCAGGTCGTCTGGTCGGACCAAGAAAACGCTCCTCCTA
GCATGGACCTCTTCACCGAACGAACCCGAAGAAAGGTAGTCTTCGAGGTG
CACGACACCAACAGCCTGAGCCATCGCTTCAACGTCACGTCGACCTTGGG
CACCGACGGTGTGTTCTCCACGGACGACGACCTCGAGATCTCGTGCGCGG
ACCTGAAGTTCGGGTTCGAGACATGGCGGGCCAGCCAGAACACCATGGTC
GGCTTCTCGCCGCGGCTGGTGACACGCGACCCGGGGACGGGGCGCCACTC
GTACCGGTCTTGGAGGGTGGTGCGCTGGAACGGGGTGTACAACGTGATCC
TGACCAAGTGCTGCTTCCTGCACCGGGACCACCTGCGGACGTACGTGGAC
GAGATGACCGCGCCGCTCCTGGCGTACATCGACGAGCACCGGAACTGCGA
GGACATCGCCATGTCGGTGGTGGTGGCCAAGTTCCACAAGACTCCCCCCG
TGTGGGTCGGCGGGAGGGTGAAGGAGATCGGAGGGGACGGGATCAGCGGC
TTGGCGCACCACTTCGACGCGCGCAGCAACTGCGTGGACTTCTTCTCCGA
GGAGTTCGGAGACATGCCGCTGTTGGAATCTTCCGTCAAGGTGTACCCCA
TGTACACTGGCCTGCTGTCGTGGCTGTAG
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