mRNA_Ecto-sp13_S_contig5625.15965.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5625.15965.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE) HSP 1 Score: 736 bits (1900), Expect = 1.100e-236 Identity = 478/764 (62.57%), Postives = 505/764 (66.10%), Query Frame = 1
Query: 4 AAGTPETFRERLRRHLSPANWIKSVQLDGPTGADADASRRLTWNNGGGSGSSDSYDSGDGGSMCSNGITGVESSDGKACCPSECGSCSTGCDRRRLGGRDSSDDDTVCGTRKRRRRLTYGHDDSNDSDDGYEEYCDCNTRRALRSGSSXXXXXXXXXXXXXXXDPEVECCADAIVANGQMCDDVESAPCVIG-EPTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAMCSNGFPGIQSGNACCLAECGGCGGSDCDALGGGLGAENCCESHIVEHGELCSTAREAPCYIDEPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPT----DVCSNGIPGIESGNACCLAECGGCGGSGCAEFGXXXXXXXXCESDIVEHGELCSIALEAPCYLEGDTFHNPTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTDVCSNGFPGIQSGNACCLAECGGCGGADCDALGEGLGAANCCESDIVERGELCSIALEAPCYLE--------------------------------------------------DTCSNGFPGIQSGNACCLAECGGCGGSDCDEFGGGLGAENCCESDIVEHGELCSIAREAPCYIDEPTPEPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDICTNGIPGIQSGNACCLAECGGCGGSGCGEFGGGLGAENCCESEIVEHGELCSIALEAPCYLEEPSPEPT 2130
AAGTPETFR++LR HLSPANW+KSVQLDGPTG +ADASRRLTWN+GGGSGSSDSYDSGDGG++CSNG+ GVESSDGKACCPSECGSCSTGCDRRRLG SDDGYEEYCDCNTRRALRSGS XXXXXXXX DP VECCAD IV NGQMCDDV SAPCVIG +P + XXXXXXXXXXX GNACCLAECGGCGG DCDALGGGLGAENCCES IVEHGELCS A EAPCYID XXXXXXXXXXXXXXXXXXX E D+CSNG PGI+SGNACCLAECGGCGGS C G CESDIVE GELCSIALEAPCYLE D CSNGFPGIQSGNACCLAECGGCGG+DCD G+GLGA NCCESDIVE GELCSIALEAPCYL+ D CSNGFPGIQSGNACCLAECGGCGGSDCD+FG GLGAENCCESDIV++GELCSIA EAPCY+DEPTPEP XXXXXXXXXXXXXXXXXXXXXXXXXXXX EPTD+C+NGIPGIQSGNACCLAECGGCGGS C +FG GLGAENCCES+IV++GELCSIALEAPCYL+EP+PEPT
Sbjct: 5 AAGTPETFRDKLRHHLSPANWMKSVQLDGPTGTEADASRRLTWNHGGGSGSSDSYDSGDGGAICSNGLAGVESSDGKACCPSECGSCSTGCDRRRLGWXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDGYEEYCDCNTRRALRSGSFSDSGXXXXXXXXTGPDPAVECCADTIVDNGQMCDDVGSAPCVIGGQPAHKVSLASVSNLDDYLFRRPPGGSIPEPTXXXXXXXXXXXXXXXXXXXXXXXXGNACCLAECGGCGGLDCDALGGGLGAENCCESRIVEHGELCSIALEAPCYIDGEMNGVGNACCLAECGXXXXXXXXXXXXXXXXXXXCESDIVERGEICSIALEAPCYLEDMCSNGFPGIQSGNACCLAECGGCGGSDCDALGGGLGAENCCESDIVERGELCSIALEAPCYLE-------------------------------------------DTCSNGFPGIQSGNACCLAECGGCGGSDCDQFGDGLGAENCCESDIVEHGELCSIALEAPCYLDEPTPEPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDLCSNGFPGIQSGNACCLAECGGCGGSDCDQFGDGLGAENCCESDIVDYGELCSIALEAPCYLDEPTPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------EPTDLCSNGIPGIQSGNACCLAECGGCGGSDCDQFGDGLGAENCCESDIVDYGELCSIALEAPCYLDEPTPEPT 713
BLAST of mRNA_Ecto-sp13_S_contig5625.15965.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI) HSP 1 Score: 730 bits (1884), Expect = 5.500e-229 Identity = 552/868 (63.59%), Postives = 575/868 (66.24%), Query Frame = 1
Query: 1 QAAGTPETFRERLRRHLSPANWIKSVQLDGPTGADADASRRLTWNNGGGSGSSDSYDSGDGGSMCSNGITGVESSDGKACCPSECGSCSTGCDRRRLGGRDSSDDDTVCGTRKRRRRLTYGHDDSNDSDDGYEEYCDCNTRRALRSGSSXXXXXXXXXXXXXXXDPEVECCADAIVANGQMCDDVESAPCVIGEPTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAMCSNGFPGIQSGNACCLAECGGCGGSDCDALGGGLGAENCCESHIVEHGELCSTAREAPCYIDEPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------------EPTDVCSNGIPGIESGNACCLAECGGCGGSGCAEFGXXXXXXXXCESDIVEHGELCSIALEAPCYLEGDTFHNPTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTDVCSNGFPGIQSGNACCLAECGGCGGADCDALGEGLGAANCCESDIVERGELCSIALEAPCYLE--------------------------------------------------------------DTCSNGFPGIQSGNACCLAECGGCGGSDCDEFGGGLGAENCCESDIVEHGELCSIAREAPCYIDEPTPEPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------EPTDICTNGIPGIQSGNACCLAECGGCGGSGCGEFGGGLGAENCCESEIVEHGELCSIALEAPCYLEEPSPEPT 2130
QAAGTPETFRE+LRRHLSPANWIKSVQLDGPTG DADASRRLTWN+GG SGSSD +S DGGSMCSNG+TGVESSDGKACCPSECGSCSTGCDRRRLGGRDSSD+DT+CGTR+R XXXXXXXXXXXX + EVECCAD IV NGQMCDDV SAPCVIG TPE XXXXXXXXXXXXXXXXXXXXXXXXX +CSNGFPGIQSGNACCLAECGGCGGSDCDALGGGLGA+NCCESHIVEHGELCS AREAPCY++EPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EPTDVCSNG PGIESGNACCLAECGGCGGS C G CESDIVEHGELCS+ALEAPCYLE DVCSNGFPGIQSGNACCLAECGGCGG+DCDALG GLGA NCCESDIVERGELCSIALEAPCYLE DTCSNGFPGIQSGNACCLAECGGCGGSDCD GGGLGAENCCESDIVEHGELCSIA EAPCYIDEPTP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EPT +C+NG PGIQSGNACCLAECG CGGS C EFGGGLGA+NCCES+IVEHGELCSIALEAPCY+++ +P P+
Sbjct: 40 QAAGTPETFREKLRRHLSPANWIKSVQLDGPTGNDADASRRLTWNHGGDSGSSDDSNSNDGGSMCSNGVTGVESSDGKACCPSECGSCSTGCDRRRLGGRDSSDNDTICGTRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPELEVECCADTIVDNGQMCDDVGSAPCVIGGSTPEPXXXXXXXXXXXXXXXXXXXXXXXXX------------VVCSNGFPGIQSGNACCLAECGGCGGSDCDALGGGLGADNCCESHIVEHGELCSIAREAPCYVEEPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDVCSNGFPGIESGNACCLAECGGCGGSDCDALGGGLGAENCCESDIVEHGELCSVALEAPCYLE-------------------------------------------DVCSNGFPGIQSGNACCLAECGGCGGSDCDALGGGLGADNCCESDIVERGELCSIALEAPCYLEEPAPEPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDTCSNGFPGIQSGNACCLAECGGCGGSDCDALGGGLGAENCCESDIVEHGELCSIALEAPCYIDEPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTGMCSNGFPGIQSGNACCLAECGACGGSDCDEFGGGLGADNCCESDIVEHGELCSIALEAPCYIDDAAPAPS 852
BLAST of mRNA_Ecto-sp13_S_contig5625.15965.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE) HSP 1 Score: 230 bits (587), Expect = 9.010e-59 Identity = 248/473 (52.43%), Postives = 284/473 (60.04%), Query Frame = 1
Query: 712 MCSNGFPGIQS--GNACCLAECGGCGGSDCDALG-GGLGAENCCESHIVEHGELCSTAREAPCYIDEPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDVCSNGIPGIESGNACCLAECGGCGGSGCAEFGXXXXXXXXCESDIVEHGELCSIALEAPCYLEGDTFHNPTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTDVCSNGFPGIQSGNACCLAECGGCGGADCDALGEGLGAANCCESDIVERGELCSIALEAPCYLEDTCSNGFPGIQS--GNACCLAECGGCGGSDCDEFG-GGLGAENCCESDIVEHGELCSIAREAPCYIDE-PTPEPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDICTNGIPGIQSGNACCLAECGGCGGSGCGEFGGGLGAENCCESEIVEHGELCSIALEAPCYLE 2109
+CS G PGI+S G CC C CGG+ C +G GAE+CC+S ++ G CS + EAPC +D P XXXXXXXXXXXXXXXXXXXXXX DVCSNGIPGI+SG++CCLAECG CGGSGCAEFG C I E+GELCS+AL APCY++ PTP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + + + AP CS G GI+S G CC C CGG C G GAE+CC+SD++ G CS++ EAPC +DE PTPEP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+C+NGIPGIQSG CCLAECG CGG GC EFGGGLG +NCC+ I E+GELCS+ L APC ++
Sbjct: 343 VCSTGIPGIESSDGAVCCPINCTQCGGAGCATVGLPEYGAESCCQSDVLSAGVSCSVSEEAPCVLDAPATEMPAMAPTPEXXXXXXXXXXXXXXXXXXXXXXG-----------------DVCSNGIPGIQSGDSCCLAECGACGGSGCAEFGGGLGEDNCCAVRIEEYGELCSVALAAPCYVDAPP---PTPVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPAPS----EMPVMAPTDEVVVCSTGIRGIESSDGAVCCPLGCTQCGGEGCSTVGLPEYGAESCCQSDVLSAGVSCSVSEEAPCVLDETPTPEPNAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDVCSNGIPGIQSGITCCLAECGECGGPGCAEFGGGLGQDNCCQGRIEEYGELCSVTLAAPCIVD 791
BLAST of mRNA_Ecto-sp13_S_contig5625.15965.1 vs. uniprot
Match: D7FJ69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ69_ECTSI) HSP 1 Score: 203 bits (516), Expect = 1.410e-56 Identity = 106/211 (50.24%), Postives = 121/211 (57.35%), Query Frame = 1
Query: 1537 LCSIALEAPCYL-------------------EDTCSNGFPGIQSGNACCLAECGGCGGSDCDEFGGGLGAENCCESDIVEHGELCSIAREAPCYIDEPTPEPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDICTNGIPGIQSGNACCLAECGGCGGSGCGEFGGGLGAENCCESEIVEHGELCSIALEAPCYLEE 2112
+C I APC L D CSNG PG+QSG +CCLAECGGCGGS C E GGGLG NCCE +I E GELCSI EAPC +D P P+ EPTD+C+NG PGIQSG +CCLAECG CGG GCGEFGGGLGA+ CCES+I E+GELCSIAL APCY+++
Sbjct: 1 MCDIFGSAPCVLGYAPAPTPVAEPVAPVTEPTDVCSNGIPGVQSGVSCCLAECGGCGGSGCAELGGGLGEHNCCEGEIEEFGELCSIKLEAPCVVDASAPAPSPVAEPVAPVT------------------------------EPTDVCSNGFPGIQSGVSCCLAECGECGGRGCGEFGGGLGADKCCESDIEEYGELCSIALAAPCYIDD 181
BLAST of mRNA_Ecto-sp13_S_contig5625.15965.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 201 bits (511), Expect = 3.790e-49 Identity = 253/556 (45.50%), Postives = 283/556 (50.90%), Query Frame = 1
Query: 712 MCSNGFPGIQSGNACCLAECGGCGGSDCDALGGGLGAENCCESHIVEHGELCSTAREAPCYIDE-----PTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------EPTDVCSNGIPGIES--GNACCLAECGGCGGSGCAEFGXXXXXXXXC-ESDIVEHGELCSIALEAPCYLEGDTFHNPTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTDVCSNGFPGIQSGNACCLAECGGCGGADCDALGEGLGAANCCESDIVERGELCSIALEAPCYLEDTCSNGFPGIQSGNACCLAECGGCGGSDCDEFGGGLGAENCCESDIVEHGELCSIAREAPCYIDE-----PTPEPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-----------------------------------------------------PTD---ICTNGIPGIQS--GNACCLAECGGCGGSGCGEFGG-GLGAENCCESEIVEHGELCSIALEAPCYLEEPSPEPT 2130
+CSNGFPGIQSG++CC AEC CGG C GGGLG +NCC I E+GELCSTA APCY+D+ PTP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + VCS GIPGIES G CC C CGG GC+ G C E D+ G CS++ EAPC L+ TP XXXXXXXXXXXXXXXX PT + P + D CSNGFPGIQSG++CC AEC CGG C EFGGGLG +NCC I E+GELCS A APCY+D PTP T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PTD +C+ GI GI+S G CC C CGG GC G GAE+CC+S + G CS++ EAPC L+E +PEPT
Sbjct: 541 VCSNGFPGIQSGDSCCHAECEACGGFGCAEFGGGLGEDNCCAVRIEEYGELCSTALAAPCYVDDGSAPPPTPATTEMPVVMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVIVCSTGIPGIESSDGTVCCPINCTQCGGEGCSTVGLPEYGAESCCELDVQSAGVSCSVSEEAPCVLDDVLSPTETPXXXXXXXXXXXXXXXXXTPE------------PTVAPATEMPAMGPTPEXXXXXX------------------XXXXXXXXXXXXXXXXXXXXXXXXXDVCSNGFPGIQSGDSCCHAECEACGGFGCAEFGGGLGEDNCCAVRIEEYGELCSTALAAPCYVDNGSAPPPTPATTEMPVVMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAPSEMPVMAPTDEVVVCSTGIRGIESSDGAVCCPVGCKQCGGEGCSTVGRPDYGAESCCQSGVRSTGVSCSVSEEAPCVLDETTPEPT 1066
BLAST of mRNA_Ecto-sp13_S_contig5625.15965.1 vs. uniprot
Match: D7FZM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM1_ECTSI) HSP 1 Score: 152 bits (384), Expect = 4.770e-35 Identity = 97/269 (36.06%), Postives = 115/269 (42.75%), Query Frame = 1
Query: 1387 VCSNGFPGIQSGNACCLAECGGCGGADCDALGEGLGAANCCESDIVER--GELCSIALEAPCYLE--------------------DTCSNGFPGIQSGNACCLAECGGCGGSDCDEFGGGLGAENCCESDIVEHGELCSIAREAPCYIDEPTPEPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDICTNGIPGIQSGNACCLAECGGCGGSGCGEFGGGLGAENCCESEIVEHGELCSIALEAPCYLEEPSPEP 2127
CSNG PG+ G+ CCL CG CGG C A+ GA++CC I E G C EAPC + TCSNG G Q G CCL CG CGG C G G++NCC S I+ G +C EAPC I+ TP P T C+NGI G Q G ACC A CG CGG GCG G GA CC S++ G LCS +PC ++ +P P
Sbjct: 291 TCSNGIPGVSDGDVCCLEACGQCGGEGCGAIAGTNGASDCCPDTIKEESGGVFCG---EAPCVMAGFTPSPLNPAFDGTAAPVAPSTCSNGIAGYQDGAICCLEICGRCGGDGCGTIPGTGGSDNCCPSTILAAGVVCG---EAPCIIEGYTPAPAVVGGGTTAPYG-------------------------------TSTCSNGILGYQDGPACCAANCGQCGGGGCGSVPGTAGASACCSSDVELAGNLCSATGVSPCVIDNYTPAP 522
BLAST of mRNA_Ecto-sp13_S_contig5625.15965.1 vs. uniprot
Match: A0A6H5JII7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII7_9PHAE) HSP 1 Score: 139 bits (351), Expect = 9.070e-31 Identity = 74/130 (56.92%), Postives = 83/130 (63.85%), Query Frame = 1
Query: 1381 TDVCSNGFPGIQSGNACCLAECGGCGGADCDALGEGLGAANCCESDIVERGELCSIALEAPCYLEDTCSNGFPGIQSGNACCLAECGGCGGSDCDEFGGGLGAENCCESDIVEHGELCSIAREAPCYIDE 1770
TDVCSNG PG+QSG +CCLAECGGCGG+ C LG GLG NCCE +I E GELCSI LEAPC ++ GNA GGLGA+ CCESDI E+GELCSIA APCYID+
Sbjct: 462 TDVCSNGIPGVQSGVSCCLAECGGCGGSGCAELGGGLGEHNCCEGEIEEFGELCSIKLEAPCVID------------GNAXXXXXXXXXXXXXXXXXXGGLGADQCCESDIEEYGELCSIAFAAPCYIDD 579
BLAST of mRNA_Ecto-sp13_S_contig5625.15965.1 vs. uniprot
Match: A0A6H5K6S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6S4_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.580e-23 Identity = 52/64 (81.25%), Postives = 54/64 (84.38%), Query Frame = 3
Query: 2598 DVCSNGFPGIQSGNACCLVECGACGGTDCDAFGGGLGADNCCESDIVEHGELCSIALEAPCYID 2789
D+CSNGF GIQSGNACCL ECG CGG C FGGGLGAD CCESDI E+GELCSIAL APCYID
Sbjct: 444 DMCSNGFSGIQSGNACCLAECGECGGHGCGEFGGGLGADKCCESDIEEYGELCSIALAAPCYID 507
BLAST of mRNA_Ecto-sp13_S_contig5625.15965.1 vs. uniprot
Match: D7FHN7_ECTSI (von Willebrand A domain containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN7_ECTSI) HSP 1 Score: 109 bits (273), Expect = 9.450e-23 Identity = 72/189 (38.10%), Postives = 93/189 (49.21%), Query Frame = 1
Query: 1558 APCYLEDTCSNGFPGIQSGN--ACCLAECGGCGGSDCDEFGGGLGAENCCESDIVEHGELCSIAREAPCYID-EPTPEPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDICTNGIPGIQS--GNACCLAECGGCGGSGCGEFGGGLGAENCCESEIVEHGELCSIALEAPCYLE 2109
AP + CSNG GI+S N ACC CG CGG C GG + +CCES+IVE GE C+ +PCYID + +P + CTNG+PG++S G CC A+CG CGG GCGEFG E+CC +EI+++G+ CS APCYL+
Sbjct: 99 APISDIERCSNGVYGIESSNGKACCALTCGSCGGVGCSGRPGG--SYDCCESEIVEEGEACAATGASPCYIDGDEVLDPVVPSMSPVVPEETDMPSGFGGGSYSYSYDFVSWDGDSMD--DQFMWCTNGVPGMESAGGEVCCPADCGQCGGVGCGEFG-----EDCCITEIMDYGQPCSEIGTAPCYLD 278
BLAST of mRNA_Ecto-sp13_S_contig5625.15965.1 vs. uniprot
Match: D8LML5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML5_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 4.520e-19 Identity = 57/139 (41.01%), Postives = 76/139 (54.68%), Query Frame = 1
Query: 1387 VCSNGFPGIQSGN--ACCLAECGGCGGADCD-ALGEGLGAANCCESDIVERGELCSIALEAPCYL-------EDTCSNGFPGIQSGNA--CCLAECG-GCGGSDCDEFGGGLGAENCCESDIVEHGELCSIAREAPCYI 1764
VCSNG GIQS + ACC+ ECG CGG C A L +A+CC ++I+E G LC +++ APC + + C NG G+Q + CC CG CGG C G + A CC + I+E G +CS APC +
Sbjct: 29 VCSNGLEGIQSTSLDACCVEECGLCGGVGCTPANTSSLTSADCCATEIIESGTLCEVSMAAPCIITTAAASNDSVCENGQTGVQDPDTDVCCPLVCGDSCGGEGCGSLAG-VDATQCCSNLIIESGAVCSDTVSAPCVV 166 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5625.15965.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5625.15965.1 >prot_Ecto-sp13_S_contig5625.15965.1 ID=prot_Ecto-sp13_S_contig5625.15965.1|Name=mRNA_Ecto-sp13_S_contig5625.15965.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=689bp MCSNGITGVESSDGKACCPSECGSCSTGCDRRRLGGRDSSDDDTVCGTRKback to top mRNA from alignment at Ecto-sp13_S_contig5625:513..9010+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5625.15965.1 ID=mRNA_Ecto-sp13_S_contig5625.15965.1|Name=mRNA_Ecto-sp13_S_contig5625.15965.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8498bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5625:513..9010+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5625:513..9010+ >mRNA_Ecto-sp13_S_contig5625.15965.1 ID=mRNA_Ecto-sp13_S_contig5625.15965.1|Name=mRNA_Ecto-sp13_S_contig5625.15965.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2067bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5625:513..9010+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |