mRNA_Ecto-sp13_S_contig5621.15962.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5621.15962.1 vs. uniprot
Match: A0A6H5JXV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV4_9PHAE) HSP 1 Score: 391 bits (1004), Expect = 6.140e-136 Identity = 191/197 (96.95%), Postives = 196/197 (99.49%), Query Frame = 1
Query: 1 RTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCCQQDLSCGRDHCHTPLAKRAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEMDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGVEYFRAVVKECR 591
RTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCCQQDLSCGRDHCHTP A+RAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVE+DKHEDVWRPAFLKRQS+RG+RRAEALRKLAKHRSQLEKAALAATACKAGWEKGVEYFRAVVKEC+
Sbjct: 52 RTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCCQQDLSCGRDHCHTPPAQRAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHEDVWRPAFLKRQSDRGMRRAEALRKLAKHRSQLEKAALAATACKAGWEKGVEYFRAVVKECQ 248
BLAST of mRNA_Ecto-sp13_S_contig5621.15962.1 vs. uniprot
Match: A0A6H5KLL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL8_9PHAE) HSP 1 Score: 292 bits (747), Expect = 2.360e-97 Identity = 155/197 (78.68%), Postives = 160/197 (81.22%), Query Frame = 1
Query: 1 RTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCCQQDLSCGRDHCHTPLAKRAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEMDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGVEYFRAVVKECR 591
RTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSK PAPPR KRPRDCC H + L + HEMMATYKARVEQGQLEFADMHVRDLSTAML+AAVE+DKHE VWR AFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGVEYFRAVVKEC+
Sbjct: 39 RTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKFGPAPPRFKRPRDCCPAT-----HHLQSVLHLQG-----------------HEMMATYKARVEQGQLEFADMHVRDLSTAMLNAAVEVDKHEYVWRTAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGVEYFRAVVKECQ 213
BLAST of mRNA_Ecto-sp13_S_contig5621.15962.1 vs. uniprot
Match: A0A6H5K5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Y7_9PHAE) HSP 1 Score: 264 bits (674), Expect = 2.420e-87 Identity = 126/129 (97.67%), Postives = 126/129 (97.67%), Query Frame = 1
Query: 1 RTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCCQQDLSCGRDHCHTPLAKRAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAA 387
RTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCC QDL CGRDHCHTP AKRAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAA
Sbjct: 22 RTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCCLQDLFCGRDHCHTPPAKRAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAA 150
BLAST of mRNA_Ecto-sp13_S_contig5621.15962.1 vs. uniprot
Match: D7FMZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ0_ECTSI) HSP 1 Score: 239 bits (609), Expect = 1.210e-77 Identity = 127/137 (92.70%), Postives = 130/137 (94.89%), Query Frame = 1
Query: 220 LAKRAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEMDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGVEYFRAVVKECRSAVAATSAGLDES 630
LA+R GAGRPKG FGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVE+DKHE+VWRPAFLKRQSNRGVRRAEALRKL KHRSQLEKAALAATACKAGWEKGVEYFRAVVKECRSAVAATSAGLD S
Sbjct: 17 LAQRG---GAGRPKGRFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHEEVWRPAFLKRQSNRGVRRAEALRKLTKHRSQLEKAALAATACKAGWEKGVEYFRAVVKECRSAVAATSAGLDSS 150
BLAST of mRNA_Ecto-sp13_S_contig5621.15962.1 vs. uniprot
Match: A0A6H5KAS5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS5_9PHAE) HSP 1 Score: 211 bits (536), Expect = 1.160e-61 Identity = 123/219 (56.16%), Postives = 143/219 (65.30%), Query Frame = 1
Query: 13 IKYPKSNKKARDWAAEAALAAVWRPSHCD-RYATLSKDTSKVEPAPPRTKRPRDCCQQDLSCGRDHCHTPLAK-RAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEMDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGVEYFRAVVKECRSAVAATSAGLDESMDVSHAQAGKL 663
IK PK RDWAAE AA WRPS + E APPR KRPRDC S P AK A G+GRPKGS+G KR+ E +E+GQ A + RDL MLDA E+ +H++VW PAFLKRQSNRGV R EALRKLAKHRSQLEKAA A+ AC++GWE+G +YFRAV+KEC+SAVAATSAGL+ES+ VSHAQAG L
Sbjct: 64 IKCPKGRNTGRDWAAEDRFAATWRPSFSSGNVPHTDASAGEAEAAPPREKRPRDCRHAAASTE----DAPAAKVGGARPGSGRPKGSYGWKRVREAAQQLNDYIERGQPHCALIASRDLPGDMLDAVKEVHQHQEVWGPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQSAVAATSAGLNESVLVSHAQAGSL 278
BLAST of mRNA_Ecto-sp13_S_contig5621.15962.1 vs. uniprot
Match: A0A6H5JU25_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU25_9PHAE) HSP 1 Score: 211 bits (536), Expect = 4.950e-60 Identity = 123/219 (56.16%), Postives = 143/219 (65.30%), Query Frame = 1
Query: 13 IKYPKSNKKARDWAAEAALAAVWRPSHCD-RYATLSKDTSKVEPAPPRTKRPRDCCQQDLSCGRDHCHTPLAK-RAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEMDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGVEYFRAVVKECRSAVAATSAGLDESMDVSHAQAGKL 663
IK PK RDWAAE AA WRPS + E APPR KRPRDC S P AK A G+GRPKGS+G KR+ E +E+GQ A + RDL MLDA E+ +H++VW PAFLKRQSNRGV R EALRKLAKHRSQLEKAA A+ AC++GWE+G +YFRAV+KEC+SAVAATSAGL+ES+ VSHAQAG L
Sbjct: 64 IKCPKGRNTGRDWAAEDRFAATWRPSFSSGNVPHTDASAGEAEAAPPREKRPRDCRHAAASTE----DAPAAKVGGARPGSGRPKGSYGWKRVREAAQQLNDYIERGQPHCALIASRDLPGDMLDAVKEVHQHQEVWGPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQSAVAATSAGLNESVLVSHAQAGSL 278
BLAST of mRNA_Ecto-sp13_S_contig5621.15962.1 vs. uniprot
Match: D8LEU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU9_ECTSI) HSP 1 Score: 182 bits (462), Expect = 5.850e-55 Identity = 100/124 (80.65%), Postives = 107/124 (86.29%), Query Frame = 1
Query: 292 MMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEMDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGVEYFRAVVKECRSAVAATSAGLDESMDVSHAQAGKL 663
MM TY+A VEQ QL FA HVR LS+AM DAA E+D+HE WR AFLKRQSNRGVRR EAL KLA HRSQLEKAALA+ A KAGWEKGVEYFRAVVKEC+SAVAATSAGLDE+MDVSHAQAGKL
Sbjct: 1 MMETYQACVEQDQLAFAGWHVRALSSAMFDAAREVDRHEKDWRQAFLKRQSNRGVRRTEALGKLANHRSQLEKAALASAARKAGWEKGVEYFRAVVKECQSAVAATSAGLDETMDVSHAQAGKL 124
BLAST of mRNA_Ecto-sp13_S_contig5621.15962.1 vs. uniprot
Match: A0A6H5K6U6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6U6_9PHAE) HSP 1 Score: 174 bits (440), Expect = 3.100e-52 Identity = 79/81 (97.53%), Postives = 79/81 (97.53%), Query Frame = 1
Query: 1 RTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCCQQDLSCGRDHCHTPLAKRAAPA 243
RTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCCQQDLSCGRDHCHTP AK AAPA
Sbjct: 52 RTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCCQQDLSCGRDHCHTPPAKPAAPA 132
BLAST of mRNA_Ecto-sp13_S_contig5621.15962.1 vs. uniprot
Match: A0A6H5KUB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUB8_9PHAE) HSP 1 Score: 175 bits (443), Expect = 1.090e-50 Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 1
Query: 220 LAKRAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEMDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAA 516
LA+R GAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVE+DKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAA
Sbjct: 17 LAQRG---GAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAA 112
BLAST of mRNA_Ecto-sp13_S_contig5621.15962.1 vs. uniprot
Match: A0A6H5K924_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K924_9PHAE) HSP 1 Score: 166 bits (419), Expect = 4.430e-49 Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = -1
Query: 1 CSTLCKWCVAVVAPARKILLTAVSWPFGSWRRRLDFARVFRECGIAVTMRWPPDSSEGRFGRPVTGLLVGLRILDAVGA 237
CSTLC+WCVAVVAPARKILLTAVSWPFGSWRRR DFARVFRECGIAVTMRWPPDSSEGRFGRPVTGLLVGLRILDAVGA
Sbjct: 7 CSTLCRWCVAVVAPARKILLTAVSWPFGSWRRRFDFARVFRECGIAVTMRWPPDSSEGRFGRPVTGLLVGLRILDAVGA 85 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5621.15962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5621.15962.1 >prot_Ecto-sp13_S_contig5621.15962.1 ID=prot_Ecto-sp13_S_contig5621.15962.1|Name=mRNA_Ecto-sp13_S_contig5621.15962.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=221bp RTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPback to top mRNA from alignment at Ecto-sp13_S_contig5621:7851..9012+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5621.15962.1 ID=mRNA_Ecto-sp13_S_contig5621.15962.1|Name=mRNA_Ecto-sp13_S_contig5621.15962.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1162bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5621:7851..9012+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5621:7851..9012+ >mRNA_Ecto-sp13_S_contig5621.15962.1 ID=mRNA_Ecto-sp13_S_contig5621.15962.1|Name=mRNA_Ecto-sp13_S_contig5621.15962.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=663bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5621:7851..9012+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |