mRNA_Ecto-sp13_S_contig5595.15912.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5595.15912.1 vs. uniprot
Match: D7FIE7_ECTSI (DEP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE7_ECTSI) HSP 1 Score: 409 bits (1052), Expect = 2.950e-144 Identity = 205/215 (95.35%), Postives = 208/215 (96.74%), Query Frame = 1
Query: 1 MEDMSKVAEVLPGEDITEDEIKELGDKMHAELQITDRTYRLRTYKQCFVGKDAVQWLIKTSSRVSSTEEAVALGNLLMDLGYFHHVTRDHPFQDSGLFYRFTEDAKVGGVATDESGKKDSWTALASRLFPTTSGEESRQADLEAVVSRDADMINTLVEIGVSPIDQYNTELLDNVHPANWVDAEPDGVRVCLQGSFLTTAEDGGAAVKMLLWWGL 645
MEDMSKVAEVLPGEDITEDEIKELGDKMHAEL+ITDRTYRLRTYKQCFVGKDAVQWLIK SSRVSSTEEAVALGNLLMDLGYFHHVTRDHPFQDSGLFYRF EDAKVGGVATDESGKKDSWTALASRLFPTTSG+ESRQADLEAVVSRDADMINTLVEIGVSPIDQYNTELLDNVHPANWVDAEPDG VCLQGSFLTTA+D G AVKMLL WGL
Sbjct: 1 MEDMSKVAEVLPGEDITEDEIKELGDKMHAELRITDRTYRLRTYKQCFVGKDAVQWLIKASSRVSSTEEAVALGNLLMDLGYFHHVTRDHPFQDSGLFYRFAEDAKVGGVATDESGKKDSWTALASRLFPTTSGQESRQADLEAVVSRDADMINTLVEIGVSPIDQYNTELLDNVHPANWVDAEPDGPGVCLQGSFLTTAKDSGGAVKMLLLWGL 215
BLAST of mRNA_Ecto-sp13_S_contig5595.15912.1 vs. uniprot
Match: A0A836CF07_9STRA (Mercuric reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF07_9STRA) HSP 1 Score: 141 bits (355), Expect = 2.760e-35 Identity = 76/199 (38.19%), Postives = 113/199 (56.78%), Query Frame = 1
Query: 58 EIKELGDKMHAELQITDRTYRLRTYKQCFVGKDAVQWLIKTSSRVSSTEEAVALGNLLMDLGYFHHVTRDHPFQDSGLFYRFTEDAKVGG--VATDESGKKDSWTALASRLFPTTSGEESRQADLEAVVSRDADMINTLVEIGVSPIDQYNTELLDNVHPANWVDAEPDGVRVCL-----QGSFLTTAEDGGAAVKMLL 633
+I+ L ++ +++ DR Y L TY + F+G DAV +++ + SS E+AV +GN++M+ G F HVT+DH F++ LFYRF D G A ++G SW L LFP G+ + Q DL +V+RDA T + +GVSP+D+YNT LLDNVHP W+D DG + G ++ A G K+ +
Sbjct: 2 DIEALAQRLRNGVEVKDRKYHLTTYPKVFIGTDAVSFMLGDGT-ASSIEDAVDIGNIMMEAGAFQHVTKDHAFKNEPLFYRFAADEPDHGKKAALGDTGTAVSWRHLTQSLFPAGDGD-TMQTDLSGIVNRDASFEATELAVGVSPLDEYNTTLLDNVHPPAWIDPPGDGTYNLVVLGAGSGGLVSAAGAAGVGAKVAI 198
BLAST of mRNA_Ecto-sp13_S_contig5595.15912.1 vs. uniprot
Match: A0A388LFS9_CHABU (DEP domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LFS9_CHABU) HSP 1 Score: 140 bits (354), Expect = 6.300e-35 Identity = 87/219 (39.73%), Postives = 121/219 (55.25%), Query Frame = 1
Query: 43 DITEDEIKELGDKMHAELQITDRTYRLRTYKQCFVGKDAVQWLIKTSSRVSSTEEAVALGNLLMDLGYFHHVTRDHPFQDSGLFYRFTEDAKV---GGVATDESGKKDSWT--------------ALASRLFPTTSGEESRQADLEAVVSRDADMINTLVEIGVSPIDQYNTELLDNVHPANWVDAEPDG-----VRVCLQGSFLTTAEDGGAAVKMLL 633
D E ++ E+ +K+ + L+I DRTY L+TYK CFVG +AV ++IK S VSS E+ V LGNLLM FHHV +DH F+++ LFYRF +D G VA D+ G+ SW A A + + G + +DL +D+D+ EI VSP+D+YN ELLDNVHP W++ +P G V G +T A G + K+ L
Sbjct: 150 DREEMDLAEITEKLRSGLEIKDRTYLLKTYKSCFVGSEAVAFMIK-SGMVSSEEDGVHLGNLLMQQKVFHHVVKDHTFKNAYLFYRFAQDETERSHGKVAVDQQGEALSWLHFLKPKALWVDEAEAAAYQPKDRSGGSAEKASDL-----KDSDLQKAAEEIEVSPLDKYNVELLDNVHPVKWINPKPAGRYNLVVIGAGAGGLVTAAGAAGVSAKVAL 362
BLAST of mRNA_Ecto-sp13_S_contig5595.15912.1 vs. uniprot
Match: A0A0G4FLL1_VITBC (DEP domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FLL1_VITBC) HSP 1 Score: 137 bits (344), Expect = 1.010e-33 Identity = 79/199 (39.70%), Postives = 112/199 (56.28%), Query Frame = 1
Query: 61 IKELGDKMHAELQITDRTYRLRTYKQCFVGKDAVQWLIKTSSRVSSTEEAVALGNLLMDLGYFHHVTRDHPFQDSGLFYRFT-EDAKVGGVATDESGKKDSWTALASRLFPTTSG--EESRQADLEAVVSRDADMINTLVEIGVSPIDQYNTELLDNVHPANWVDAEPDG-----VRVCLQGSFLTTAEDGGAAVKMLL 633
+++L D++ A+L+I DR Y L TY +CF+G DAV+WL+ + + E+A+ +G L+MD G F HVTRDH +D LFYRF ++ G A GK +W + + P + S+Q DL+ VVSRD +M IGV+P+D YNT LLD+VHPA W D P V G ++ A G K+ L
Sbjct: 21 VQDLADQIRAKLEIRDRRYHLTTYTKCFLGSDAVKWLMG-NGHAETVEDALLVGQLMMDQGMFAHVTRDHSLKDESLFYRFALDEPSKGEKAVSRDGKALTWAQFLNGILPVDVRPLDGSKQTDLK-VVSRDPNMQMAPKHIGVAPLDAYNTSLLDHVHPAAWHDPLPKATYNLVVMGAGTGGLVSAAGAAGVQAKVAL 217
BLAST of mRNA_Ecto-sp13_S_contig5595.15912.1 vs. uniprot
Match: A0A4Y6Q314_9DELT (FAD-containing oxidoreductase n=2 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6Q314_9DELT) HSP 1 Score: 131 bits (330), Expect = 7.390e-32 Identity = 69/163 (42.33%), Postives = 98/163 (60.12%), Query Frame = 1
Query: 67 ELGDKMHAELQITDRTYRLRTYKQCFVGKDAVQWLIKTSSRVSSTEEAVALGNLLMDLGYFHHVTRDHPFQDSGLFYRFTEDAKVGGVATDESGKKDSWTALASRLFPTTSGEESRQADLEAVVSRDADMINTLVEIGVSPIDQYNTELLDNVHPANWVDAEP 555
EL +K+ ++ITDRTYRL TY+ CFVG++A W+++ EEA +GNLL++ G FHHV R+H F++ LFYRF+ D G A SG K SW+ + P SG + + V+ + A ++ +IGV P+D+ N ELLD VHP WV+ EP
Sbjct: 5 ELIEKLRENVEITDRTYRLETYEDCFVGEEACAWMVEAGV-ARDIEEAERIGNLLLEAGVFHHVLREHKFENDYLFYRFSSDEDHGRKAESGSGGKVSWSDVFGPAHPGDSGVGLQPRMPDDVMLQTATKVD---QIGVEPMDEANVELLDQVHPPAWVNPEP 163
BLAST of mRNA_Ecto-sp13_S_contig5595.15912.1 vs. uniprot
Match: A0A2V3J6P8_9FLOR (Mercuric reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6P8_9FLOR) HSP 1 Score: 121 bits (303), Expect = 3.870e-28 Identity = 75/204 (36.76%), Postives = 108/204 (52.94%), Query Frame = 1
Query: 43 DITEDEIKELGDKMHAELQITDRTYRLRTYKQCFVGKDAVQWLIKTSSRVSSTEEAVALGNLLMDLGYFHHVTRDHPFQDSGLFYRFTEDAKVGGVATDESGKKDSWTALASRLFPTTSGEESRQADLEAVVSRDADMINTLVEI--GVSPIDQYNTELLDNVHPANWVDAEPDGVRVCL-----QGSFLTTAEDGGAAVKMLL 633
D +E +I EL + I DR +RL+TYK CFVG +AVQW++ TS ++ +AV LG L+ + G H RDH F+D L+Y+F ED++ GGV E G+ +W S + R + S D D NT +E+ V P+D+ N +LLDNVHP W++ DGV L G +T++ G K+ L
Sbjct: 8 DNSELDIVELASNFRKNVTIKDRRWRLQTYKDCFVGSEAVQWMV-TSGTANTRADAVKLGLLMQEAGIIEHCVRDHDFKDQELYYKFIEDSERGGVPKSE-GRLVTWADFVSSPLGADRSLQPRVPE-----SHD-DSTNTALEVEQSVWPLDEQNIKLLDNVHPPEWIEPTFDGVYNLLVIGAGAGGLVTSSGAAGVGAKVAL 203
BLAST of mRNA_Ecto-sp13_S_contig5595.15912.1 vs. uniprot
Match: UPI0010AB8C00 (FAD-containing oxidoreductase n=1 Tax=Desulfosediminicola flagellatus TaxID=2569541 RepID=UPI0010AB8C00) HSP 1 Score: 119 bits (298), Expect = 1.780e-27 Identity = 69/174 (39.66%), Postives = 98/174 (56.32%), Query Frame = 1
Query: 46 ITEDEIKELGDKMHAELQITDRTYRL--RTYKQCFVGKDAVQWLIKTSSRVSSTEEAVALGNLLMDLGYFHHVTRDHPFQDSGLFYRFTEDAKVGGVATDESGKKD-SWTALASRLFPTTSGEESRQADLEAVVSRDADMINTLVE-IGVSPIDQYNTELLDNVHPANWVDAEP 555
+TE ++ LG+ A + I DR Y +TY +CFVG++AVQ L++ S S E+A+ LGN+L++ G+FHHV R H F++ LFYRF D G V +G W+ L S QA + + ADM +E +G+SP+D+YN LLDNVHP W D +P
Sbjct: 7 LTETDLAGLGNVFRANVDIQDRKYGFPSKTYARCFVGEEAVQKLME-SGLASDEEDAIRLGNILLESGFFHHVQRAHVFKNEYLFYRFASDEDHGRVPDQMAGMVSVKWSDFLGELKAVRGAGGSLQATVPGPDADLADMEQVDLEAVGISPLDEYNAALLDNVHPKEWQDPDP 179
BLAST of mRNA_Ecto-sp13_S_contig5595.15912.1 vs. uniprot
Match: UPI001BBD1E47 (FAD-containing oxidoreductase n=2 Tax=Desulfosarcina cetonica TaxID=90730 RepID=UPI001BBD1E47) HSP 1 Score: 117 bits (292), Expect = 1.160e-26 Identity = 73/200 (36.50%), Postives = 103/200 (51.50%), Query Frame = 1
Query: 61 IKELGDKMHAELQITDRTY--RLRTYKQCFVGKDAVQWLIKTSSRVSSTEEAVALGNLLMDLGYFHHVTRDHPFQDSGLFYRFTEDAKVGGVATDESGKKDSWTALASRLFPTTSGEESRQADLEAVVSRDADMIN----TLVEIGVSPIDQYNTELLDNVHPANWVDAEPD---GVRVCLQGSFLTTAEDGGAAVKMLL 633
++ L ++ A + DRTY R RTY +CFVG +AV LIK + E+A+ +GN+L+D G FHHV +H F++ LFYRF D G VA G SWT + P T+ E R + RD D+ + GVSP+D YNT +LD +HP WVD +P + V G ++ A G ++ L
Sbjct: 18 LESLTQRIKALFDVKDRTYGFRPRTYPKCFVGSEAVAQLIKKGIALD-VEDAMHIGNMLLDAGVFHHVLDEHAFKNEKLFYRFISDEDHGRVARKPDGSTVSWTDF---IAPPTNPEGRRMTLQPDIPERDPDLASFEQVDPETCGVSPLDAYNTRMLDLLHPKVWVDPKPKPSYNLVVIGAGGLVSAAGAAGVGARVAL 213
BLAST of mRNA_Ecto-sp13_S_contig5595.15912.1 vs. uniprot
Match: UPI001E28D820 (FAD-containing oxidoreductase n=1 Tax=Desulfosediminicola ganghwensis TaxID=2569540 RepID=UPI001E28D820) HSP 1 Score: 116 bits (290), Expect = 2.140e-26 Identity = 67/173 (38.73%), Postives = 96/173 (55.49%), Query Frame = 1
Query: 55 DEIKELGDKMHAELQITDRTYRL--RTYKQCFVGKDAVQWLIKTSSRVSSTEEAVALGNLLMDLGYFHHVTRDHPFQDSGLFYRFTEDAKVGGVATDESGKKDSWTALASRLFPTTSGEESRQADLEAVVSRDADMINT----LVEIGVSPIDQYNTELLDNVHPANWVDAEP 555
+E++ L + + I R Y RTY+ CFVG++AV L++T + + A+ LGNLLM G FHHV R H F++ LFYRF D GGVA + S ++SW A L +G + + D ++ + L E+G+SP+D+YN +LLDNVHP W D EP
Sbjct: 10 EELESLATEFRSIFDIQHRKYGFPARTYRNCFVGEEAVARLLETGMAIDEGD-ALRLGNLLMAHGVFHHVQRAHSFKNEYLFYRFAVDEDHGGVAAEAS--QESWVKWADFLSSGGAGRRGEKVLQPTLPEPDVNLASMDQVCLEEVGISPLDEYNAQLLDNVHPRAWRDPEP 179
BLAST of mRNA_Ecto-sp13_S_contig5595.15912.1 vs. uniprot
Match: F2U0W6_SALR5 (Mercuric reductase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U0W6_SALR5) HSP 1 Score: 116 bits (290), Expect = 2.160e-26 Identity = 68/170 (40.00%), Postives = 101/170 (59.41%), Query Frame = 1
Query: 52 EDEIKELGDKMHAELQITDRTYRLRTYKQCFVGKDAVQWLIKTSSRVSSTEE-AVALGNLLMDLGYFHHVTRDHPFQDSGLFYRFTEDAKVGGVATDESGKKDSWTALASRLFPTTSGEESRQADLEAVVSRDADM-INTLVEIGVSPIDQYNTELLDNVHPANWVDAEP 555
+DE+ + ++ L++ DR YRL++YK CFVG DAV ++ SS +++TEE AV LGN+L+D GY HV R+H F++ LFYRFT+ G A+D S SW A + T + + +AD S A + + T ++ SP+D +N LL VHPA+W + EP
Sbjct: 4 DDELDSIVMRLEQGLEVKDRRYRLKSYKNCFVGSDAVALMM--SSGITNTEEDAVLLGNVLLDAGYIAHVLREHRFENKRLFYRFTKHEDHGAPASDAS----SWAAFLGSMNETDTDSDYARADQRRRSSVQASLDLETASQL--SPMDTHNLALLSKVHPADWKNPEP 165 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5595.15912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5595.15912.1 >prot_Ecto-sp13_S_contig5595.15912.1 ID=prot_Ecto-sp13_S_contig5595.15912.1|Name=mRNA_Ecto-sp13_S_contig5595.15912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=215bp MEDMSKVAEVLPGEDITEDEIKELGDKMHAELQITDRTYRLRTYKQCFVGback to top mRNA from alignment at Ecto-sp13_S_contig5595:3760..6936- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5595.15912.1 ID=mRNA_Ecto-sp13_S_contig5595.15912.1|Name=mRNA_Ecto-sp13_S_contig5595.15912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3177bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5595:3760..6936- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5595:3760..6936- >mRNA_Ecto-sp13_S_contig5595.15912.1 ID=mRNA_Ecto-sp13_S_contig5595.15912.1|Name=mRNA_Ecto-sp13_S_contig5595.15912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=645bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5595:3760..6936- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |