mRNA_Ecto-sp13_S_contig558.15889.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig558.15889.1
Unique NamemRNA_Ecto-sp13_S_contig558.15889.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: D7G987_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G987_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 6.980e-71
Identity = 148/231 (64.07%), Postives = 162/231 (70.13%), Query Frame = 1
Query:    1 MDKANQLKLQHSRPTESRRSSNSNEGDGSTPAGSPGNP----------------------------------SSP----------KDCGLGASATVPNPGAGKRDAPSGSDHGGSPSTPSGKGREPDPV*SNATKRRRGPGRATTTDNIPTPRLPSSPEKDGKSFMLACRDQWTYVHELTPLRDDFRLDDLALLKTKRKVMLLFIAPGAIDPKGMDMKTWRERLLKISYSA 561
            MDKANQLKLQHSRPTESR SSNSNEG  STPAGSPG P                                  ++P          KDCG+ AS TVPNPGAGKRDAPSGSDHGGSPSTPSGKGREPDP  SNATKRRRGPGRA TTDNIPTP+LPSSPEKDGKSFMLACRDQWTY+HEL  LRDDFRLDDLA+LKTKRKVMLL IAP     + ++    ++ LL++  +A
Sbjct:  134 MDKANQLKLQHSRPTESR-SSNSNEGARSTPAGSPGTPXXXAKGCTQCDAPLGSCYECDKCHVYHTGGCRNTTAPEGESELLRRCKDCGVSASTTVPNPGAGKRDAPSGSDHGGSPSTPSGKGREPDPEGSNATKRRRGPGRAPTTDNIPTPKLPSSPEKDGKSFMLACRDQWTYMHELNVLRDDFRLDDLAMLKTKRKVMLLSIAPQRHGYEDVERAPVKDLLLRLREAA 363          
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: D7FHU2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU2_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 3.260e-58
Identity = 98/113 (86.73%), Postives = 107/113 (94.69%), Query Frame = 1
Query: 1489 DSLRQVEMKLTLEQHGLVVEYGTRGGGLVSPKKALHLSTGVDHFLVAHRQGDDFTCNENVLPQKFPGMLRTSEGRPEPNTAAASVMTAVPYLGAKRRFSDNVAVWAIQRFTSY 1827
            DSLRQVEMKLTLEQHGLVVEYG+RGGGLVSPKKALHL+TGVDHFLVAHRQGD+FTCNE V+PQKF GMLRTSEG+ +PNTAAASV TAVPYLGAK+RFSD++AVW IQR TSY
Sbjct:   51 DSLRQVEMKLTLEQHGLVVEYGSRGGGLVSPKKALHLATGVDHFLVAHRQGDNFTCNEKVIPQKFDGMLRTSEGKHDPNTAAASVTTAVPYLGAKKRFSDDIAVWVIQRLTSY 163          
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: A0A6H5JK41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK41_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 2.110e-56
Identity = 143/403 (35.48%), Postives = 216/403 (53.60%), Query Frame = 1
Query: 1489 DSLRQVEMKLTLEQHGLVVEYGTRGGGLVSPKKALHLSTGVDHFLVAHRQ------GDDFTCNENVLPQKFPGMLR----------TSEGRPEPNTAAASVMTAVPYLGAKRRFSDNVAVWAIQRFTSYGDTVATLTADEDGVVDAALSCGRRAEAFLVGGDEVGGTVRKVLDDAFLESWRLQHIRHKSDAGELHRVKTGTLPMGLPENTPPAAVSGMIDQALDVQQDGDVIDQDCQRLGIDGRHAAIVTVAKKLADDQTWCLRDATEEEDAPIVLCAKSTKDYGEHTSSAIPLWGKLVIYDTPQEAYESLN--EHDLYPTTYIRLVLVADSALLRTMCENGKEVLSSDTVGLYLKVDPTCPAFYAI*EDEID--SPTHEVRNELDRQATRDALLKQFKHKAP 2637
            + L+Q  + + +E HGLVVEYG+RGGGL +  K   +   +DH++VAH        G +FTCN+ V PQ F G L           T+ GR  P+     +M  VP+ G  R + DNV  +AIQR+T  GDTV ++ A+ DGVV+ AL+ GR+ EAFLV  +  G    +V ++A+  +WR        DA E+  +  G+LP G+PE T P  +   ++   +  ++G  +D      G      A++  A+ +A+   W ++     +D P  LCA++   Y     + IP+WGK V+YD+ ++A +SLN   H      ++RLV VAD+ LL+ MC   + V  S+  GLYL+V  +CPA+YA  E   D  S  HE+ + L R   R+ L+  F    P
Sbjct:  700 EHLQQPGLGMVVEDHGLVVEYGSRGGGLTAESKKKFIGGALDHYIVAHHNASGDGGGMNFTCNDTVTPQSFTGKLSAGSSDGSTWSTASGRRIPSP----LMGDVPHKGVTRGYHDNVVQFAIQRWTKAGDTVVSMHAESDGVVEGALNLGRKVEAFLVASEHHGAVTTRV-EEAWEGAWRKGLFTDDGDASEITYISHGSLPDGIPEITTPHRILADVNTRTNNLREGGRVD------GTTPDERALLGAAQAIAEQMGWAIK-VNPVDDLPY-LCARNKTSY-RTAHNDIPVWGKTVVYDSHRQALDSLNVGNHST-DLQFVRLVRVADNELLKKMCPKNQVVKHSEA-GLYLRVAESCPAYYACCEQGKDKSSTHHEISSYLQRTDNRETLIGAFNDGVP 1086          
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: D7FZ29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ29_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 1.750e-55
Identity = 139/400 (34.75%), Postives = 214/400 (53.50%), Query Frame = 1
Query: 1489 DSLRQVEMKLTLEQHGLVVEYGTRGGGLVSPKKALHLSTGVDHFLVAHRQGD------DFTCNENVLPQKFPGMLRTSEGRPEPNTAAAS--------VMTAVPYLGAKRRFSDNVAVWAIQRFTSYGDTVATLTADEDGVVDAALSCGRRAEAFLVGGDEVGGTVRKVLDDAFLESWRLQHIRHKSDAGELHRVKTGTLPMGLPENTPPAAVSGMIDQALDVQQDGDVIDQDCQRLGIDGRHAAIVTVAKKLADDQTWCLRDATEEEDAPIVLCAKSTKDYGEHTSSAIPLWGKLVIYDTPQEAYESLNEHD-LYPTTYIRLVLVADSALLRTMCENGKEVLSSDTVGLYLKVDPTCPAFYAI*EDEID--SPTHEVRNELDRQATRDALLKQFKHKAP 2637
            + L+Q  + + +E HGLVVEYG+RGGGL +  K   +   +DH++VAH  G       +FTCN+ V PQ F G  R S G  + +T + +        +M  VP  G  R + DNV  +AIQR+T  GDTV ++ A+ DGVV+ AL+ GR+ EAFLV  +  G    +V ++A+  +WR         A E+  +  G+LP G+PE T P  +   ++   +  ++G  +D      G      A++  A+ +A+   W ++    ++D P  LCA++   Y + T + IP+ G  V+YD+  +A +SLN  D      ++RLV VAD+ LL+ MC   + V  S+   LYL+V  +CPA+YA  E   D  S  HE+ + L R   R+ L+  F    P
Sbjct:  199 EHLQQPGLGMVVEDHGLVVEYGSRGGGLTAESKKKFIGGALDHYIVAHHNGCGDGGGMNFTCNDTVTPQSFTG--RRSAGSSDGSTWSTASGRRIPSPLMGDVPRKGVTRGYHDNVVQFAIQRWTKAGDTVVSMHAESDGVVECALNLGRKVEAFLVASEHHGAVTTRV-EEAWEGAWRKGLFTDDGSASEITYISHGSLPDGIPETTTPNRILADVNTRTNNLREGGSVD------GATPDERALLGAAQAIAEQMGWVIK-VNSDDDLPY-LCARNKTSY-QTTHNDIPVSGNPVVYDSHGQALDSLNIEDHSTDLQFVRLVRVADNGLLKKMCPKNQIVKHSEAA-LYLRVAESCPAYYACCEQGKDKSSAHHEISSYLQRTDNRETLIGAFNDGVP 585          
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: A0A6H5J8R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R0_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 4.070e-51
Identity = 90/111 (81.08%), Postives = 98/111 (88.29%), Query Frame = 1
Query: 1483 RSDSLRQVEMKLTLEQHGLVVEYGTRGGGLVSPKKALHLSTGVDHFLVAHRQGDDFTCNENVLPQKFPGMLRTSEGRPEPNTAAASVMTAVPYLGAKRRFSDNVAVWAIQR 1815
            RSDS+RQVEMKLTLEQHGLVVEYGTRGGG VSPKKALHL+TGVD+ L+AHRQGDDFT N+ V+PQKF G  RT EGR  PNTAAASVM  VPY+GAK+R SDNVAVWAIQR
Sbjct:   24 RSDSMRQVEMKLTLEQHGLVVEYGTRGGGQVSPKKALHLTTGVDYLLIAHRQGDDFTYNDKVIPQKFDGCQRTDEGRHTPNTAAASVMNGVPYVGAKKRLSDNVAVWAIQR 134          
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: D7FRZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRZ4_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 1.810e-48
Identity = 112/169 (66.27%), Postives = 116/169 (68.64%), Query Frame = 1
Query:    1 MDKANQLKLQHSRPTESRRSSNSNEGDGSTPAGSPGNP----------------------------------SSP----------KDCGLGASATVPNPGAGKRDAPSGSDHGGSPSTPSGKGREPDPV*SNATKRRRGPGRATTTDNIPTPRLPSSPEKDGKSFMLAC 375
            MDKANQLKLQHSRPTESR SSNSNEG  STPAGSPG P                                  ++P          KDCG+ AS TVPNPGAGKRDAPSGSDHGGSPSTPSGKGREPDP  SNATKRRRGPGRA TTDNIPTP+LPSSPEKDGKSFMLAC
Sbjct:   26 MDKANQLKLQHSRPTESR-SSNSNEGARSTPAGSPGTPXXXAKGCTQCDAPLGSCYECDKCHVYHTGGCRNTTAPEGESELLRRCKDCGVSASTTVPNPGAGKRDAPSGSDHGGSPSTPSGKGREPDPEGSNATKRRRGPGRAPTTDNIPTPKLPSSPEKDGKSFMLAC 193          
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: A0A6H5KN26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN26_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 3.110e-30
Identity = 116/377 (30.77%), Postives = 178/377 (47.21%), Query Frame = 1
Query: 1486 SDSLRQVEMKLTLEQHGLVVEYGTRGGGLVSPKK-ALHLSTGVDHFLVAHRQ--GDD-----FTCNENVLPQKFPGMLRTSEGRPEPNTAAASVMTAVPYLGAKRRFSDNVAVWAIQRFTSYGDTVATLTADEDGVVDAALSCGRRAEAFLVGGDEVGGTVRKVLDDAFLESWRLQHIRHKSD-AGELHRVKTGTLPMGLPENTPPAAVSGMIDQALDVQQDGDVIDQDCQRLGIDGRHAAIVTVAKKLADDQTWCLRDATEEEDAPIVLCAKSTKDYGEHTSSAIPLWGKLVIYDTPQEAYESLNEHDLYPTTYIRLVLVADSALLRTMCENGKEVLSSDTVGLYLKVDPTCPAFYAI*EDEIDSPTHEVRNELDR 2589
            + + +Q    L +E H ++VE+ +RGGG    K    HL+  V  FLVAH+   GD      FTCN+ V      G   +S G         ++M AVP+  A   F   +    I RFT+  DTV +   D D  ++ ALS GR+ E F V    V   +R+ + DAF  +W     + + D AG L  +  G LP  +P ++ PA+V  ++   +   + G+  D+   ++        +  VA KL+    + L    +  D+   L       Y  +    IP+WG + I+ +P EA ESL    +     +RL+ VADSA L+ M   GKE ++     LY++V  TCPA+YA  E       HE+ +E+ R
Sbjct:  799 AGAFKQAGTALEVEDHPMLVEFESRGGGRPGHKSDRRHLTGRVHQFLVAHQATTGDSIPSVRFTCNQTVTADDVHG-AESSSG------PCLNLMKAVPFENALSPFPPRLLTMCINRFTNLQDTVVSTCGDRDKTIETALSLGRKVEVFPVDDRNVD-EMRERVKDAFDIAWADGVFKREPDPAGGLRTISPGNLPDAVPRSSAPASVPTVVQDMM--AEAGETGDEPSDKV--------LTLVASKLSSTLGYAL--VQDGYDSSYALYTIPKMKYAMN-GLEIPIWGDMEIHLSPAEARESLRADPVDGA--VRLIRVADSAQLKQMLVPGKEFVAPGAT-LYMRVAKTCPAYYARWESSDPFTHHEILSEVPR 1151          
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: D8LJG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG8_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 4.110e-29
Identity = 113/377 (29.97%), Postives = 170/377 (45.09%), Query Frame = 1
Query: 1486 SDSLRQVEMKLTLEQHGLVVEYGTRGGGLVSPKK-ALHLSTGVDHFLVAHRQ--GDD-----FTCNENVLPQKFPGMLRTSEGRPEPNTAAASVMTAVPYLGAKRRFSDNVAVWAIQRFTSYGDTVATLTADEDGVVDAALSCGRRAEAFLVGGDEVGGTVRKVLDDAFLESWRLQHIRHKSD-AGELHRVKTGTLPMGLPENTPPAAVSGMIDQALDVQQDGDVIDQDCQRLGIDGRHAAIVTVAKKLADDQTWCLRDATEEEDAPIVLCAKSTKDYGEHTSSAIPLWGKLVIYDTPQEAYESLNEHDLYPTTYIRLVLVADSALLRTMCENGKEVLSSDTVGLYLKVDPTCPAFYAI*EDEIDSPTHEVRNELDR 2589
            + + +Q    L +E H ++VE+ +RGGG    K    HL+  V  FLVAH+   GD      FTCN+ V      G   +S G         ++M AVP+  A   F   +    I RFT+  DTV +   D D  ++ ALS GR+ E F V    V   +R+ + DAF  +W     + + D AG L  +  G LP  +P ++ PA+V  ++   +   + G+  D+   + G D  +A       K A +                                 IP+WG + I+ +P EA ESL    +     +RL+ VADSA L+ M   GKE ++     LY++V  TCPA+YA  E       HE+ +E+ R
Sbjct:  415 AGAFKQAGTALEVEDHPMLVEFESRGGGRPGHKSDRRHLTGRVHQFLVAHQATTGDSIPSVRFTCNQTVTADDVHG-AESSSG------PCLNLMKAVPFENALSPFPPRLLTMCINRFTNLQDTVVSTCGDRDKTIETALSLGRKVEVFPVDDRNVD-EMRERVKDAFDIAWADGVFKREPDPAGGLRTISPGNLPDAVPRSSAPASVPTVVQDMM--AEAGETGDEPSDKDGYDSSYALYTIPKMKYAMN------------------------------GPEIPIWGDMEIHLSPAEARESLRADRVDGA--VRLIRVADSAQLKQMLVPGKEFVAPGAT-LYMRVAKTCPAYYARWESSDPFTHHEILSEVPR 748          
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: D7FXI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI3_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 3.520e-23
Identity = 48/59 (81.36%), Postives = 55/59 (93.22%), Query Frame = 1
Query: 1627 AHRQGDDFTCNENVLPQKFPGMLRTSEGRPEPNTAAASVMTAVPYLGAKRRFSDNVAVW 1803
            + RQGD+FTCNE V+PQKF GMLRTSEG+ +PNTAAASVMTAVPYLGAK+RFSD+VAVW
Sbjct:   66 SRRQGDNFTCNEKVIPQKFDGMLRTSEGKHDPNTAAASVMTAVPYLGAKKRFSDDVAVW 124          
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: A0A6H5K673_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K673_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.070e-8
Identity = 39/96 (40.62%), Postives = 52/96 (54.17%), Query Frame = 1
Query: 2245 EEDAPIVLCAKSTKDYGEHTSSAIPLWGKLVIYDTPQEAYESLNEHDLYPTTYIRLVLVADSALLRTMCENGKEVLSSDTVGLYLKVDPTCPAFYA 2532
            ++D   VL   ST+ YG      + +WG++V+YDT +EA ESL   D     Y+RL+   +   L+  C   KE L S T  LYL VDP CP  YA
Sbjct:    5 DDDNEWVLSISSTESYGPDEKPLL-VWGQMVVYDTKEEAAESLCP-DADAAGYVRLIRALNHEGLQATCLPEKEFLGSQTSALYLWVDPRCPVHYA 98          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G987_ECTSI6.980e-7164.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHU2_ECTSI3.260e-5886.73Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JK41_9PHAE2.110e-5635.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ29_ECTSI1.750e-5534.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8R0_9PHAE4.070e-5181.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRZ4_ECTSI1.810e-4866.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN26_9PHAE3.110e-3030.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJG8_ECTSI4.110e-2929.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FXI3_ECTSI3.520e-2381.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K673_9PHAE1.070e-840.63Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig558contigEcto-sp13_S_contig558:2..3711 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1802
Hectar predicted targeting categoryother localisation
Exons6
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-00_011300.2
Cds size1029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig558.15889.1prot_Ecto-sp13_S_contig558.15889.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig558 1814..3609 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463773.0765352-UTR-Ecto-sp13_S_contig558:1..3781681463773.0765352-UTR-Ecto-sp13_S_contig558:1..378Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig558 2..378 +
1681463773.0874636-UTR-Ecto-sp13_S_contig558:681..9751681463773.0874636-UTR-Ecto-sp13_S_contig558:681..975Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig558 682..975 +
1681463773.138431-UTR-Ecto-sp13_S_contig558:3609..37111681463773.138431-UTR-Ecto-sp13_S_contig558:3609..3711Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig558 3610..3711 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463773.1005268-CDS-Ecto-sp13_S_contig558:1813..21181681463773.1005268-CDS-Ecto-sp13_S_contig558:1813..2118Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig558 1814..2118 +
1681463773.1094542-CDS-Ecto-sp13_S_contig558:2429..26131681463773.1094542-CDS-Ecto-sp13_S_contig558:2429..2613Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig558 2430..2613 +
1681463773.1180842-CDS-Ecto-sp13_S_contig558:2854..30881681463773.1180842-CDS-Ecto-sp13_S_contig558:2854..3088Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig558 2855..3088 +
1681463773.1275468-CDS-Ecto-sp13_S_contig558:3303..36091681463773.1275468-CDS-Ecto-sp13_S_contig558:3303..3609Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig558 3304..3609 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig558.15889.1

>prot_Ecto-sp13_S_contig558.15889.1 ID=prot_Ecto-sp13_S_contig558.15889.1|Name=mRNA_Ecto-sp13_S_contig558.15889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=343bp
MKLTLEQHGLVVEYGTRGGGLVSPKKALHLSTGVDHFLVAHRQGDDFTCN
ENVLPQKFPGMLRTSEGRPEPNTAAASVMTAVPYLGAKRRFSDNVAVWAI
QRFTSYGDTVATLTADEDGVVDAALSCGRRAEAFLVGGDEVGGTVRKVLD
DAFLESWRLQHIRHKSDAGELHRVKTGTLPMGLPENTPPAAVSGMIDQAL
DVQQDGDVIDQDCQRLGIDGRHAAIVTVAKKLADDQTWCLRDATEEEDAP
IVLCAKSTKDYGEHTSSAIPLWGKLVIYDTPQEAYESLNEHDLYPTTYIR
LVLVADSALLRTMCENGKEVLSSDTVGLYLKVDPTCPAFYAI*
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mRNA from alignment at Ecto-sp13_S_contig558:2..3711+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig558.15889.1 ID=mRNA_Ecto-sp13_S_contig558.15889.1|Name=mRNA_Ecto-sp13_S_contig558.15889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3710bp|location=Sequence derived from alignment at Ecto-sp13_S_contig558:2..3711+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACAAGGCGAACCAGCTCAAACTACAGCACAGCCGACCGACGGAGAG CAGGAGGAGCAGCAACAGCAACGAGGGCGATGGGTCAACCCCGGCGGGAT CGCCCGGCAATCCTTCTTCTCCTAAGGATTGCGGACTGGGCGCAAGCGCG ACGGTGCCGAACCCGGGGGCTGGGAAGCGTGATGCCCCGAGTGGTTCTGA CCATGGGGGCAGTCCGTCCACCCCGTCCGGCAAAGGCCGTGAGCCTGACC CTGTGTAGAGCAACGCGACCAAGAGGAGGCGTGGTCCTGGGCGCGCTACG ACGACTGACAACATACCCACCCCGAGACTACCGTCGTCGCCCGAAAAGGA CGGCAAGAGCTTCATGCTCGCGTGCAGGTGGGGACCACAACATAGAGCAC ACAGCTAGATGCGGGCTTATCTATCTTTGCTTTGACAGAGGACATACAGG TGTTGTGTTGGGTCATCTCCAACCCCCATCCATGCTGAGTGCAGAATAAT GTGTTACAAGTAGGTTCCGTCGGAAGCACCGCAATCGTGAGCGCTGTCCA CCCCATCCTTGTGGTACTATCGCTTGCATCGGATACATCGTAACCCTGCC CCCGAAGTATGTATGTCCCTGTTTGGCGTTGTAGTCACAACGGAACTCCT ACCTTGTTGCCGACCACCCGCTGCTTACAGGGACCAGTGGACCTACGTGC ACGAGCTGACTCCGCTGAGGGATGACTTCCGTTTGGATGACCTCGCCTTG CTGAAGACGAAGCGGAAGGTGATGCTGCTCTTTATTGCACCCGGTGCCAT CGACCCCAAAGGCATGGATATGAAGACGTGGAGAGAGCGTCTGTTAAAGA TCTCCTACTCCGCTTGCGACCAGCTGGACCCGAAGGGCACCGTCGTTGCC CTCGTCCCGCAGCCCTACTACGACCACGCGACGGCGATAGCCGGTGGGTT CACCATACACTCCGAAATATATTTGTTACAAGCTAGTGTGCCGTTTTGGT ACGTATCAATCAAGTGGCCGGCGCCTTTAATTGACGCCTGTCAGTGACGC CTGCCAGTCGGGAGGACGATTTCGAAGTTGTGGGTACCGTTAACTACGTA GTTTCCCCCCCGTGGTACAGATTCCCTCCCCCCTACCCCGTTACCTGGTC CGTCGAGAGCATGGTTTCGTTGATTTAGCCCCGGGGTAGATCATTTTCAA CAACAACAAAAAAAACAGATGCCCTCGGGTATTTCAATTTCCCCCCGGGG TACCACTTTTTCCCACGAGTTCCCCCCGGGGGGGATGTATTCCCCTAATT TTCTGAGTCGATTTTGTTGCATTGTGGAGCACATACAAGCATGATATGGG ACCGAAAGTTCATCTATCTGCAGATCTGTACTTCCAACCAGATTTAGGTG TACTCTTCTACCTCTTGGCCCTCACTTGCTCGCAAACCTTATCCGTCTCG GTGTCGCCACTCTCTGTGTGTGTGTGTCGAACATCAATATTGTGCCCAAC CCCGGGGGGGGGCTTCCCCCCGGGTAAGCGCTGGAAAAAACAATTCCCCC CCCCGCGGTACGTCAACTCCCACCCGTGGGGGTTGGTTTCAGAGAAAAAA ACGATCCCCTCCCAGGGGGGGATACTCCGTATTTTACGGTATGGTTCTCC TTCGTTCGTGAAACACATCCTCCTCCAGAAGAAGCACCGTTACCGCTGAG CGGCGCGAATCATGTGCGTAATCCTTTCCTTCGTTGATTATTTCGTCTCG TGTCCCTCGTTCGGTCTGTAATCGTTTGTCGTTATCGTTCAGACTCCTTG AGGCAGGTGGAGATGAAACTCACCCTCGAACAGCATGGCTTGGTGGTGGA GTACGGTACCAGGGGAGGTGGCCTGGTGTCCCCGAAGAAGGCTCTGCATC TTTCAACCGGTGTCGATCACTTCCTCGTCGCACACAGGCAAGGCGACGAC TTCACGTGCAACGAGAATGTGTTACCGCAAAAGTTCCCTGGCATGCTGCG TACGTCAGAGGGCAGGCCTGAACCCAACACCGCCGCTGCATCGGTGATGA CTGCGGTCCCTTACCTCGGAGCTAAGAGGCGCTTCTCCGACAACGTTGCC GTCTGGGCGATTCAGCGGTAAGTGATAGTAGGAGACGTCCCTCCGTGTTT TTTCCTCTGTCCAAGTCCGGAGTAAAGCACAATGCTGTCAACGTCTTCTT TGATGGAGAATCGTGGGTGACCGAGAAAATACGTACAGGGCAGGAAATGT TTACGACGACGCCTGTGTAGTACCAACCACTTCCGGGACAAATGTCGGGT TGCGTCACCTTATTTATTTATTTTGCTCGGCGAATGTGATGCAACGGCAA ACACAGGTGCTCCAAACGTTTCCAACGTGCTCAATACACGCGCTGTCTGT CTGTCTTTGTCGCTGCCCCCTCATTCAGATTCACTAGTTACGGAGACACC GTAGCGACGTTGACCGCTGACGAGGACGGGGTCGTAGACGCGGCGCTTAG TTGCGGCCGGCGGGCTGAAGCATTCCTTGTGGGTGGAGATGAAGTCGGAG GAACGGTCCGCAAAGTCTTGGACGACGCCTTCCTAGAAAGCTGGAGACTC CAACATATTCGAGTGAGTGCTGATCGTCTGCCAAGATACATCTTTGCCAG CCCATTTATACGTGTACTACTACTGTTGTGTGTTGCGTTTCCTTCCAATA CGGGCGCCGGGTCAAATGTGTCATATGCTACCAAACGATGCTATGTATGT TCATCGCTACACTTTGGCGTCTGACCCATTCATGCATGCGTGCCTTTACT TTGCCCTTTTTCGCATCATGAACTTCGTCCGACCCGATTCTTCTGTTGAC AAGCACAAATCGGACGCAGGGGAACTCCACCGGGTCAAGACGGGCACTCT ACCGATGGGTCTTCCCGAGAACACGCCCCCGGCGGCTGTATCCGGCATGA TCGACCAAGCTCTCGACGTACAGCAAGATGGTGATGTGATTGACCAAGAT TGCCAACGACTCGGCATAGACGGCCGACACGCGGCAATCGTCACCGTGGC CAAGAAGCTTGCGGACGACCAAACATGGTGCCTTCGGGTATGTGTGTTCG ATGTCCCATAATTTTAGGTCTATGTTGTGATTCGTTGTAGTAGCGACGTT GCTGCTTGCGTGTGTGTCGACAATAGAGCTGCCATGGTAGTGTCGAACGT GGTGCGCACAACGCGTTGCCGACGATTATTCCCGCACTAAAACAGATGCC GTCTCCTCTCTCCGCCCGTCCCTCGTCCCTACCACCACGTTTGCTTGCGT AGGACGCGACGGAAGAAGAGGACGCACCTATTGTCCTTTGTGCCAAGAGC ACAAAGGACTACGGTGAGCACACCAGCTCCGCCATCCCCCTTTGGGGCAA ACTCGTCATCTACGATACCCCCCAAGAGGCGTACGAGTCCCTTAACGAGC ACGATCTTTACCCCACCACATACATTCGGCTCGTGCTCGTTGCAGACTCC GCACTGCTCAGAACCATGTGCGAAAATGGCAAGGAAGTCCTCTCGTCCGA TACGGTTGGACTCTATCTCAAAGTGGACCCTACGTGCCCCGCGTTTTACG CGATCTAGGAAGATGAAATCGACAGCCCGACTCACGAAGTCAGGAACGAG TTGGACCGCCAGGCGACCAGGGATGCGTTACTGAAACAGTTCAAACACAA AGCCCCCGTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig558:2..3711+

>mRNA_Ecto-sp13_S_contig558.15889.1 ID=mRNA_Ecto-sp13_S_contig558.15889.1|Name=mRNA_Ecto-sp13_S_contig558.15889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1029bp|location=Sequence derived from alignment at Ecto-sp13_S_contig558:2..3711+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAACTCACCCTCGAACAGCATGGCTTGGTGGTGGAGTACGGTACCAG
GGGAGGTGGCCTGGTGTCCCCGAAGAAGGCTCTGCATCTTTCAACCGGTG
TCGATCACTTCCTCGTCGCACACAGGCAAGGCGACGACTTCACGTGCAAC
GAGAATGTGTTACCGCAAAAGTTCCCTGGCATGCTGCGTACGTCAGAGGG
CAGGCCTGAACCCAACACCGCCGCTGCATCGGTGATGACTGCGGTCCCTT
ACCTCGGAGCTAAGAGGCGCTTCTCCGACAACGTTGCCGTCTGGGCGATT
CAGCGATTCACTAGTTACGGAGACACCGTAGCGACGTTGACCGCTGACGA
GGACGGGGTCGTAGACGCGGCGCTTAGTTGCGGCCGGCGGGCTGAAGCAT
TCCTTGTGGGTGGAGATGAAGTCGGAGGAACGGTCCGCAAAGTCTTGGAC
GACGCCTTCCTAGAAAGCTGGAGACTCCAACATATTCGACACAAATCGGA
CGCAGGGGAACTCCACCGGGTCAAGACGGGCACTCTACCGATGGGTCTTC
CCGAGAACACGCCCCCGGCGGCTGTATCCGGCATGATCGACCAAGCTCTC
GACGTACAGCAAGATGGTGATGTGATTGACCAAGATTGCCAACGACTCGG
CATAGACGGCCGACACGCGGCAATCGTCACCGTGGCCAAGAAGCTTGCGG
ACGACCAAACATGGTGCCTTCGGGACGCGACGGAAGAAGAGGACGCACCT
ATTGTCCTTTGTGCCAAGAGCACAAAGGACTACGGTGAGCACACCAGCTC
CGCCATCCCCCTTTGGGGCAAACTCGTCATCTACGATACCCCCCAAGAGG
CGTACGAGTCCCTTAACGAGCACGATCTTTACCCCACCACATACATTCGG
CTCGTGCTCGTTGCAGACTCCGCACTGCTCAGAACCATGTGCGAAAATGG
CAAGGAAGTCCTCTCGTCCGATACGGTTGGACTCTATCTCAAAGTGGACC
CTACGTGCCCCGCGTTTTACGCGATCTAG
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