mRNA_Ecto-sp13_S_contig558.15889.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: D7G987_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G987_ECTSI) HSP 1 Score: 249 bits (636), Expect = 6.980e-71 Identity = 148/231 (64.07%), Postives = 162/231 (70.13%), Query Frame = 1
Query: 1 MDKANQLKLQHSRPTESRRSSNSNEGDGSTPAGSPGNP----------------------------------SSP----------KDCGLGASATVPNPGAGKRDAPSGSDHGGSPSTPSGKGREPDPV*SNATKRRRGPGRATTTDNIPTPRLPSSPEKDGKSFMLACRDQWTYVHELTPLRDDFRLDDLALLKTKRKVMLLFIAPGAIDPKGMDMKTWRERLLKISYSA 561
MDKANQLKLQHSRPTESR SSNSNEG STPAGSPG P ++P KDCG+ AS TVPNPGAGKRDAPSGSDHGGSPSTPSGKGREPDP SNATKRRRGPGRA TTDNIPTP+LPSSPEKDGKSFMLACRDQWTY+HEL LRDDFRLDDLA+LKTKRKVMLL IAP + ++ ++ LL++ +A
Sbjct: 134 MDKANQLKLQHSRPTESR-SSNSNEGARSTPAGSPGTPXXXAKGCTQCDAPLGSCYECDKCHVYHTGGCRNTTAPEGESELLRRCKDCGVSASTTVPNPGAGKRDAPSGSDHGGSPSTPSGKGREPDPEGSNATKRRRGPGRAPTTDNIPTPKLPSSPEKDGKSFMLACRDQWTYMHELNVLRDDFRLDDLAMLKTKRKVMLLSIAPQRHGYEDVERAPVKDLLLRLREAA 363
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: D7FHU2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU2_ECTSI) HSP 1 Score: 206 bits (524), Expect = 3.260e-58 Identity = 98/113 (86.73%), Postives = 107/113 (94.69%), Query Frame = 1
Query: 1489 DSLRQVEMKLTLEQHGLVVEYGTRGGGLVSPKKALHLSTGVDHFLVAHRQGDDFTCNENVLPQKFPGMLRTSEGRPEPNTAAASVMTAVPYLGAKRRFSDNVAVWAIQRFTSY 1827
DSLRQVEMKLTLEQHGLVVEYG+RGGGLVSPKKALHL+TGVDHFLVAHRQGD+FTCNE V+PQKF GMLRTSEG+ +PNTAAASV TAVPYLGAK+RFSD++AVW IQR TSY
Sbjct: 51 DSLRQVEMKLTLEQHGLVVEYGSRGGGLVSPKKALHLATGVDHFLVAHRQGDNFTCNEKVIPQKFDGMLRTSEGKHDPNTAAASVTTAVPYLGAKKRFSDDIAVWVIQRLTSY 163
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: A0A6H5JK41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK41_9PHAE) HSP 1 Score: 222 bits (565), Expect = 2.110e-56 Identity = 143/403 (35.48%), Postives = 216/403 (53.60%), Query Frame = 1
Query: 1489 DSLRQVEMKLTLEQHGLVVEYGTRGGGLVSPKKALHLSTGVDHFLVAHRQ------GDDFTCNENVLPQKFPGMLR----------TSEGRPEPNTAAASVMTAVPYLGAKRRFSDNVAVWAIQRFTSYGDTVATLTADEDGVVDAALSCGRRAEAFLVGGDEVGGTVRKVLDDAFLESWRLQHIRHKSDAGELHRVKTGTLPMGLPENTPPAAVSGMIDQALDVQQDGDVIDQDCQRLGIDGRHAAIVTVAKKLADDQTWCLRDATEEEDAPIVLCAKSTKDYGEHTSSAIPLWGKLVIYDTPQEAYESLN--EHDLYPTTYIRLVLVADSALLRTMCENGKEVLSSDTVGLYLKVDPTCPAFYAI*EDEID--SPTHEVRNELDRQATRDALLKQFKHKAP 2637
+ L+Q + + +E HGLVVEYG+RGGGL + K + +DH++VAH G +FTCN+ V PQ F G L T+ GR P+ +M VP+ G R + DNV +AIQR+T GDTV ++ A+ DGVV+ AL+ GR+ EAFLV + G +V ++A+ +WR DA E+ + G+LP G+PE T P + ++ + ++G +D G A++ A+ +A+ W ++ +D P LCA++ Y + IP+WGK V+YD+ ++A +SLN H ++RLV VAD+ LL+ MC + V S+ GLYL+V +CPA+YA E D S HE+ + L R R+ L+ F P
Sbjct: 700 EHLQQPGLGMVVEDHGLVVEYGSRGGGLTAESKKKFIGGALDHYIVAHHNASGDGGGMNFTCNDTVTPQSFTGKLSAGSSDGSTWSTASGRRIPSP----LMGDVPHKGVTRGYHDNVVQFAIQRWTKAGDTVVSMHAESDGVVEGALNLGRKVEAFLVASEHHGAVTTRV-EEAWEGAWRKGLFTDDGDASEITYISHGSLPDGIPEITTPHRILADVNTRTNNLREGGRVD------GTTPDERALLGAAQAIAEQMGWAIK-VNPVDDLPY-LCARNKTSY-RTAHNDIPVWGKTVVYDSHRQALDSLNVGNHST-DLQFVRLVRVADNELLKKMCPKNQVVKHSEA-GLYLRVAESCPAYYACCEQGKDKSSTHHEISSYLQRTDNRETLIGAFNDGVP 1086
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: D7FZ29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ29_ECTSI) HSP 1 Score: 213 bits (543), Expect = 1.750e-55 Identity = 139/400 (34.75%), Postives = 214/400 (53.50%), Query Frame = 1
Query: 1489 DSLRQVEMKLTLEQHGLVVEYGTRGGGLVSPKKALHLSTGVDHFLVAHRQGD------DFTCNENVLPQKFPGMLRTSEGRPEPNTAAAS--------VMTAVPYLGAKRRFSDNVAVWAIQRFTSYGDTVATLTADEDGVVDAALSCGRRAEAFLVGGDEVGGTVRKVLDDAFLESWRLQHIRHKSDAGELHRVKTGTLPMGLPENTPPAAVSGMIDQALDVQQDGDVIDQDCQRLGIDGRHAAIVTVAKKLADDQTWCLRDATEEEDAPIVLCAKSTKDYGEHTSSAIPLWGKLVIYDTPQEAYESLNEHD-LYPTTYIRLVLVADSALLRTMCENGKEVLSSDTVGLYLKVDPTCPAFYAI*EDEID--SPTHEVRNELDRQATRDALLKQFKHKAP 2637
+ L+Q + + +E HGLVVEYG+RGGGL + K + +DH++VAH G +FTCN+ V PQ F G R S G + +T + + +M VP G R + DNV +AIQR+T GDTV ++ A+ DGVV+ AL+ GR+ EAFLV + G +V ++A+ +WR A E+ + G+LP G+PE T P + ++ + ++G +D G A++ A+ +A+ W ++ ++D P LCA++ Y + T + IP+ G V+YD+ +A +SLN D ++RLV VAD+ LL+ MC + V S+ LYL+V +CPA+YA E D S HE+ + L R R+ L+ F P
Sbjct: 199 EHLQQPGLGMVVEDHGLVVEYGSRGGGLTAESKKKFIGGALDHYIVAHHNGCGDGGGMNFTCNDTVTPQSFTG--RRSAGSSDGSTWSTASGRRIPSPLMGDVPRKGVTRGYHDNVVQFAIQRWTKAGDTVVSMHAESDGVVECALNLGRKVEAFLVASEHHGAVTTRV-EEAWEGAWRKGLFTDDGSASEITYISHGSLPDGIPETTTPNRILADVNTRTNNLREGGSVD------GATPDERALLGAAQAIAEQMGWVIK-VNSDDDLPY-LCARNKTSY-QTTHNDIPVSGNPVVYDSHGQALDSLNIEDHSTDLQFVRLVRVADNGLLKKMCPKNQIVKHSEAA-LYLRVAESCPAYYACCEQGKDKSSAHHEISSYLQRTDNRETLIGAFNDGVP 585
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: A0A6H5J8R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R0_9PHAE) HSP 1 Score: 186 bits (473), Expect = 4.070e-51 Identity = 90/111 (81.08%), Postives = 98/111 (88.29%), Query Frame = 1
Query: 1483 RSDSLRQVEMKLTLEQHGLVVEYGTRGGGLVSPKKALHLSTGVDHFLVAHRQGDDFTCNENVLPQKFPGMLRTSEGRPEPNTAAASVMTAVPYLGAKRRFSDNVAVWAIQR 1815
RSDS+RQVEMKLTLEQHGLVVEYGTRGGG VSPKKALHL+TGVD+ L+AHRQGDDFT N+ V+PQKF G RT EGR PNTAAASVM VPY+GAK+R SDNVAVWAIQR
Sbjct: 24 RSDSMRQVEMKLTLEQHGLVVEYGTRGGGQVSPKKALHLTTGVDYLLIAHRQGDDFTYNDKVIPQKFDGCQRTDEGRHTPNTAAASVMNGVPYVGAKKRLSDNVAVWAIQR 134
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: D7FRZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRZ4_ECTSI) HSP 1 Score: 180 bits (457), Expect = 1.810e-48 Identity = 112/169 (66.27%), Postives = 116/169 (68.64%), Query Frame = 1
Query: 1 MDKANQLKLQHSRPTESRRSSNSNEGDGSTPAGSPGNP----------------------------------SSP----------KDCGLGASATVPNPGAGKRDAPSGSDHGGSPSTPSGKGREPDPV*SNATKRRRGPGRATTTDNIPTPRLPSSPEKDGKSFMLAC 375
MDKANQLKLQHSRPTESR SSNSNEG STPAGSPG P ++P KDCG+ AS TVPNPGAGKRDAPSGSDHGGSPSTPSGKGREPDP SNATKRRRGPGRA TTDNIPTP+LPSSPEKDGKSFMLAC
Sbjct: 26 MDKANQLKLQHSRPTESR-SSNSNEGARSTPAGSPGTPXXXAKGCTQCDAPLGSCYECDKCHVYHTGGCRNTTAPEGESELLRRCKDCGVSASTTVPNPGAGKRDAPSGSDHGGSPSTPSGKGREPDPEGSNATKRRRGPGRAPTTDNIPTPKLPSSPEKDGKSFMLAC 193
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: A0A6H5KN26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN26_9PHAE) HSP 1 Score: 140 bits (353), Expect = 3.110e-30 Identity = 116/377 (30.77%), Postives = 178/377 (47.21%), Query Frame = 1
Query: 1486 SDSLRQVEMKLTLEQHGLVVEYGTRGGGLVSPKK-ALHLSTGVDHFLVAHRQ--GDD-----FTCNENVLPQKFPGMLRTSEGRPEPNTAAASVMTAVPYLGAKRRFSDNVAVWAIQRFTSYGDTVATLTADEDGVVDAALSCGRRAEAFLVGGDEVGGTVRKVLDDAFLESWRLQHIRHKSD-AGELHRVKTGTLPMGLPENTPPAAVSGMIDQALDVQQDGDVIDQDCQRLGIDGRHAAIVTVAKKLADDQTWCLRDATEEEDAPIVLCAKSTKDYGEHTSSAIPLWGKLVIYDTPQEAYESLNEHDLYPTTYIRLVLVADSALLRTMCENGKEVLSSDTVGLYLKVDPTCPAFYAI*EDEIDSPTHEVRNELDR 2589
+ + +Q L +E H ++VE+ +RGGG K HL+ V FLVAH+ GD FTCN+ V G +S G ++M AVP+ A F + I RFT+ DTV + D D ++ ALS GR+ E F V V +R+ + DAF +W + + D AG L + G LP +P ++ PA+V ++ + + G+ D+ ++ + VA KL+ + L + D+ L Y + IP+WG + I+ +P EA ESL + +RL+ VADSA L+ M GKE ++ LY++V TCPA+YA E HE+ +E+ R
Sbjct: 799 AGAFKQAGTALEVEDHPMLVEFESRGGGRPGHKSDRRHLTGRVHQFLVAHQATTGDSIPSVRFTCNQTVTADDVHG-AESSSG------PCLNLMKAVPFENALSPFPPRLLTMCINRFTNLQDTVVSTCGDRDKTIETALSLGRKVEVFPVDDRNVD-EMRERVKDAFDIAWADGVFKREPDPAGGLRTISPGNLPDAVPRSSAPASVPTVVQDMM--AEAGETGDEPSDKV--------LTLVASKLSSTLGYAL--VQDGYDSSYALYTIPKMKYAMN-GLEIPIWGDMEIHLSPAEARESLRADPVDGA--VRLIRVADSAQLKQMLVPGKEFVAPGAT-LYMRVAKTCPAYYARWESSDPFTHHEILSEVPR 1151
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: D8LJG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG8_ECTSI) HSP 1 Score: 136 bits (342), Expect = 4.110e-29 Identity = 113/377 (29.97%), Postives = 170/377 (45.09%), Query Frame = 1
Query: 1486 SDSLRQVEMKLTLEQHGLVVEYGTRGGGLVSPKK-ALHLSTGVDHFLVAHRQ--GDD-----FTCNENVLPQKFPGMLRTSEGRPEPNTAAASVMTAVPYLGAKRRFSDNVAVWAIQRFTSYGDTVATLTADEDGVVDAALSCGRRAEAFLVGGDEVGGTVRKVLDDAFLESWRLQHIRHKSD-AGELHRVKTGTLPMGLPENTPPAAVSGMIDQALDVQQDGDVIDQDCQRLGIDGRHAAIVTVAKKLADDQTWCLRDATEEEDAPIVLCAKSTKDYGEHTSSAIPLWGKLVIYDTPQEAYESLNEHDLYPTTYIRLVLVADSALLRTMCENGKEVLSSDTVGLYLKVDPTCPAFYAI*EDEIDSPTHEVRNELDR 2589
+ + +Q L +E H ++VE+ +RGGG K HL+ V FLVAH+ GD FTCN+ V G +S G ++M AVP+ A F + I RFT+ DTV + D D ++ ALS GR+ E F V V +R+ + DAF +W + + D AG L + G LP +P ++ PA+V ++ + + G+ D+ + G D +A K A + IP+WG + I+ +P EA ESL + +RL+ VADSA L+ M GKE ++ LY++V TCPA+YA E HE+ +E+ R
Sbjct: 415 AGAFKQAGTALEVEDHPMLVEFESRGGGRPGHKSDRRHLTGRVHQFLVAHQATTGDSIPSVRFTCNQTVTADDVHG-AESSSG------PCLNLMKAVPFENALSPFPPRLLTMCINRFTNLQDTVVSTCGDRDKTIETALSLGRKVEVFPVDDRNVD-EMRERVKDAFDIAWADGVFKREPDPAGGLRTISPGNLPDAVPRSSAPASVPTVVQDMM--AEAGETGDEPSDKDGYDSSYALYTIPKMKYAMN------------------------------GPEIPIWGDMEIHLSPAEARESLRADRVDGA--VRLIRVADSAQLKQMLVPGKEFVAPGAT-LYMRVAKTCPAYYARWESSDPFTHHEILSEVPR 748
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: D7FXI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI3_ECTSI) HSP 1 Score: 105 bits (263), Expect = 3.520e-23 Identity = 48/59 (81.36%), Postives = 55/59 (93.22%), Query Frame = 1
Query: 1627 AHRQGDDFTCNENVLPQKFPGMLRTSEGRPEPNTAAASVMTAVPYLGAKRRFSDNVAVW 1803
+ RQGD+FTCNE V+PQKF GMLRTSEG+ +PNTAAASVMTAVPYLGAK+RFSD+VAVW
Sbjct: 66 SRRQGDNFTCNEKVIPQKFDGMLRTSEGKHDPNTAAASVMTAVPYLGAKKRFSDDVAVW 124
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Match: A0A6H5K673_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K673_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 1.070e-8 Identity = 39/96 (40.62%), Postives = 52/96 (54.17%), Query Frame = 1
Query: 2245 EEDAPIVLCAKSTKDYGEHTSSAIPLWGKLVIYDTPQEAYESLNEHDLYPTTYIRLVLVADSALLRTMCENGKEVLSSDTVGLYLKVDPTCPAFYA 2532
++D VL ST+ YG + +WG++V+YDT +EA ESL D Y+RL+ + L+ C KE L S T LYL VDP CP YA
Sbjct: 5 DDDNEWVLSISSTESYGPDEKPLL-VWGQMVVYDTKEEAAESLCP-DADAAGYVRLIRALNHEGLQATCLPEKEFLGSQTSALYLWVDPRCPVHYA 98 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig558.15889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig558.15889.1 >prot_Ecto-sp13_S_contig558.15889.1 ID=prot_Ecto-sp13_S_contig558.15889.1|Name=mRNA_Ecto-sp13_S_contig558.15889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=343bp MKLTLEQHGLVVEYGTRGGGLVSPKKALHLSTGVDHFLVAHRQGDDFTCNback to top mRNA from alignment at Ecto-sp13_S_contig558:2..3711+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig558.15889.1 ID=mRNA_Ecto-sp13_S_contig558.15889.1|Name=mRNA_Ecto-sp13_S_contig558.15889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3710bp|location=Sequence derived from alignment at Ecto-sp13_S_contig558:2..3711+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig558:2..3711+ >mRNA_Ecto-sp13_S_contig558.15889.1 ID=mRNA_Ecto-sp13_S_contig558.15889.1|Name=mRNA_Ecto-sp13_S_contig558.15889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1029bp|location=Sequence derived from alignment at Ecto-sp13_S_contig558:2..3711+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |