mRNA_Ecto-sp13_S_contig55771.15885.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig55771.15885.1 vs. uniprot
Match: D7FR38_ECTSI (AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1) kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR38_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 2.990e-21 Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 1
Query: 1 GDRLGGRYEIIGDVGLGTFGRVVECWCLKRHRHVAVKVVRKV 126
GDRLGGRYEIIGDVGLGTFGRVVECWCLKRHRHVAVKVVRKV
Sbjct: 13 GDRLGGRYEIIGDVGLGTFGRVVECWCLKRHRHVAVKVVRKV 54
BLAST of mRNA_Ecto-sp13_S_contig55771.15885.1 vs. uniprot
Match: A0A6H5L2A1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A1_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 1.090e-19 Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 1
Query: 1 GDRLGGRYEIIGDVGLGTFGRVVECWCLKRHRHVAVKVVRKV 126
GDRLGGRYEIIGDVGLGTFGRVVECWCLKRHR VAVKVVRKV
Sbjct: 415 GDRLGGRYEIIGDVGLGTFGRVVECWCLKRHRRVAVKVVRKV 456
BLAST of mRNA_Ecto-sp13_S_contig55771.15885.1 vs. uniprot
Match: A0A4D9CUL9_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUL9_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 4.560e-10 Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 1
Query: 1 GDRLGGRYEIIGDVGLGTFGRVVECWCLKRHRHVAVKVVRKV 126
GD + GRYE++GDVG+GTFGRVV+C KR R VAVKVVR +
Sbjct: 387 GDMIRGRYEVLGDVGMGTFGRVVQCLDRKRGREVAVKVVRSI 428
BLAST of mRNA_Ecto-sp13_S_contig55771.15885.1 vs. uniprot
Match: A0A7S3JSA8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSA8_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 3.640e-8 Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 1 GDRLGGRYEIIGDVGLGTFGRVVECWCLKRHRHVAVKVVRKV 126
GD LG RYEI+G+ G GTFGRVVEC K + VA+K+VR+V
Sbjct: 117 GDILGNRYEILGNAGTGTFGRVVECIDRKNNHKVAIKIVRRV 158
BLAST of mRNA_Ecto-sp13_S_contig55771.15885.1 vs. uniprot
Match: A0A7S4E8R3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E8R3_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 1.270e-7 Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 1
Query: 1 GDRLGGRYEIIGDVGLGTFGRVVECWCLKR--HRHVAVKVVRKV 126
GD + GRYEI+G+ GLGTFGRVV+C L+ R VA+KVVR++
Sbjct: 61 GDTIDGRYEIVGEAGLGTFGRVVDCVDLRHPDRRRVALKVVRRI 104
BLAST of mRNA_Ecto-sp13_S_contig55771.15885.1 vs. uniprot
Match: A0A8J2WXB5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WXB5_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 1.270e-7 Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 1
Query: 1 GDRLGGRYEIIGDVGLGTFGRVVECWCLKR--HRHVAVKVVRKV 126
GD + GRYEI+G+ GLGTFGRVV+C L+ R VA+KVVR++
Sbjct: 738 GDTIDGRYEIVGEAGLGTFGRVVDCVDLRHPDRRRVALKVVRRI 781
BLAST of mRNA_Ecto-sp13_S_contig55771.15885.1 vs. uniprot
Match: UPI000B8CE8CA (serine/threonine-protein kinase AFC3 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CE8CA) HSP 1 Score: 53.9 bits (128), Expect = 2.730e-7 Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 1 GDRLGGRYEIIGDVGLGTFGRVVECWCLKRHRHVAVKVVRKVR 129
G+ L RY+I+G +G GTFGRV+ECW + +VA+KVVR +R
Sbjct: 60 GENLTSRYKILGKMGEGTFGRVLECWDRQTKEYVAIKVVRSIR 102
BLAST of mRNA_Ecto-sp13_S_contig55771.15885.1 vs. uniprot
Match: A0A0S3RCN3_PHAAN (Protein kinase domain-containing protein n=6 Tax=Phaseoleae TaxID=163735 RepID=A0A0S3RCN3_PHAAN) HSP 1 Score: 53.9 bits (128), Expect = 3.250e-7 Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 1 GDRLGGRYEIIGDVGLGTFGRVVECWCLKRHRHVAVKVVRKVR 129
G+ L RY+I+G +G GTFGRV+ECW + +VAVKVVR +R
Sbjct: 59 GENLTPRYKILGKMGEGTFGRVLECWDRQSREYVAVKVVRSIR 101
BLAST of mRNA_Ecto-sp13_S_contig55771.15885.1 vs. uniprot
Match: A0A1L8GTA0_XENLA (dual specificity protein kinase CLK3 isoform X1 n=2 Tax=Xenopus laevis TaxID=8355 RepID=A0A1L8GTA0_XENLA) HSP 1 Score: 53.5 bits (127), Expect = 4.460e-7 Identity = 25/44 (56.82%), Postives = 35/44 (79.55%), Query Frame = 1
Query: 1 GDRLGGRYEIIGDVGLGTFGRVVECWCLKR-HRHVAVKVVRKVR 129
G+R+ RYEI+GD+G+GTFG+VVEC L R + VA+K++R VR
Sbjct: 148 GERIQERYEIVGDLGIGTFGKVVECLDLARGNSRVALKIIRNVR 191
BLAST of mRNA_Ecto-sp13_S_contig55771.15885.1 vs. uniprot
Match: A0A6I9TG28_SESIN (serine/threonine-protein kinase AFC3 isoform X1 n=3 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9TG28_SESIN) HSP 1 Score: 52.4 bits (124), Expect = 1.140e-6 Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 1 GDRLGGRYEIIGDVGLGTFGRVVECWCLKRHRHVAVKVVRKV 126
G+ L RY+I+G +G GTFGRV+ECW + +VAVKVVR +
Sbjct: 68 GENLTPRYKILGKMGEGTFGRVLECWDRQTREYVAVKVVRSI 109 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig55771.15885.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig55771.15885.1 >prot_Ecto-sp13_S_contig55771.15885.1 ID=prot_Ecto-sp13_S_contig55771.15885.1|Name=mRNA_Ecto-sp13_S_contig55771.15885.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=43bp GDRLGGRYEIIGDVGLGTFGRVVECWCLKRHRHVAVKVVRKVRback to top mRNA from alignment at Ecto-sp13_S_contig55771:165..293- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig55771.15885.1 ID=mRNA_Ecto-sp13_S_contig55771.15885.1|Name=mRNA_Ecto-sp13_S_contig55771.15885.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=129bp|location=Sequence derived from alignment at Ecto-sp13_S_contig55771:165..293- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig55771:165..293- >mRNA_Ecto-sp13_S_contig55771.15885.1 ID=mRNA_Ecto-sp13_S_contig55771.15885.1|Name=mRNA_Ecto-sp13_S_contig55771.15885.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=129bp|location=Sequence derived from alignment at Ecto-sp13_S_contig55771:165..293- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |