mRNA_Ecto-sp13_S_contig20423.6748.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20423.6748.1 vs. uniprot
Match: D8LM07_ECTSI (Inosine-adenosine-guanosine-nucleoside hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM07_ECTSI) HSP 1 Score: 170 bits (431), Expect = 9.170e-50 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1
Query: 22 GQLLLAQTLLASESPVTVVATGPLTNLAWVLDNFPEASRKIDKVLIMGGAIDVPGNVFADDVEGFDGSAEWNIFWDPPAAKRV 270
GQLLLAQTLLASESPVTVVATGPLTNLAWVLDNFPEASRKIDKVLIMGGAIDVPGNVFADDVEGFDGSAEWNIFWDPPAAKRV
Sbjct: 143 GQLLLAQTLLASESPVTVVATGPLTNLAWVLDNFPEASRKIDKVLIMGGAIDVPGNVFADDVEGFDGSAEWNIFWDPPAAKRV 225
BLAST of mRNA_Ecto-sp13_S_contig20423.6748.1 vs. uniprot
Match: A0A6H5JPH9_9PHAE (IU_nuc_hydro domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH9_9PHAE) HSP 1 Score: 170 bits (431), Expect = 1.090e-49 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1
Query: 22 GQLLLAQTLLASESPVTVVATGPLTNLAWVLDNFPEASRKIDKVLIMGGAIDVPGNVFADDVEGFDGSAEWNIFWDPPAAKRV 270
GQLLLAQTLLASESPVTVVATGPLTNLAWVLDNFPEASRKIDKVLIMGGAIDVPGNVFADDVEGFDGSAEWNIFWDPPAAKRV
Sbjct: 138 GQLLLAQTLLASESPVTVVATGPLTNLAWVLDNFPEASRKIDKVLIMGGAIDVPGNVFADDVEGFDGSAEWNIFWDPPAAKRV 220
BLAST of mRNA_Ecto-sp13_S_contig20423.6748.1 vs. uniprot
Match: A0A7V3BVN5_9ACTN (Nucleoside hydrolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V3BVN5_9ACTN) HSP 1 Score: 108 bits (269), Expect = 1.570e-26 Identity = 52/83 (62.65%), Postives = 63/83 (75.90%), Query Frame = 1
Query: 22 GQLLLAQTLLASESPVTVVATGPLTNLAWVLDNFPEASRKIDKVLIMGGAIDVPGNVFADDVEGFDGSAEWNIFWDPPAAKRV 270
G LLA+ LL + PVT++ TGPLTNLAWVLD+ PE +I+ VL MGGA++VPGNV G DGSAEWN++WDPPAAKRV
Sbjct: 106 GHGLLARCLLETSEPVTLLVTGPLTNLAWVLDHHPEVEPRIEAVLWMGGALEVPGNV---QQPGHDGSAEWNVYWDPPAAKRV 185
BLAST of mRNA_Ecto-sp13_S_contig20423.6748.1 vs. uniprot
Match: A0A366LNV5_9ACTN (Nucleoside hydrolase n=1 Tax=Spongiactinospora rosea TaxID=2248750 RepID=A0A366LNV5_9ACTN) HSP 1 Score: 108 bits (269), Expect = 1.600e-26 Identity = 56/90 (62.22%), Postives = 67/90 (74.44%), Query Frame = 1
Query: 1 PMNKPTTGQLLLAQTLLASESPVTVVATGPLTNLAWVLDNFPEASRKIDKVLIMGGAIDVPGNVFADDVEGFDGSAEWNIFWDPPAAKRV 270
P++ P QL A LLA+E+PVTV+ATGP+TNLAW LD PE KI +V+ MGGA+DVPGNV D G DGSAEWNI+WDP AA+RV
Sbjct: 103 PVDLPAHRQL--AAWLLAAEAPVTVLATGPMTNLAWCLDRHPEVEPKIAEVVFMGGALDVPGNV---DQPGHDGSAEWNIYWDPDAAQRV 187
BLAST of mRNA_Ecto-sp13_S_contig20423.6748.1 vs. uniprot
Match: A0A7S0MEU6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MEU6_9CRYP) HSP 1 Score: 99.8 bits (247), Expect = 2.020e-23 Identity = 45/84 (53.57%), Postives = 58/84 (69.05%), Query Frame = 1
Query: 19 TGQLLLAQTLLASESPVTVVATGPLTNLAWVLDNFPEASRKIDKVLIMGGAIDVPGNVFADDVEGFDGSAEWNIFWDPPAAKRV 270
TGQ LL + +S PVT+V TGP+TN+AW LDN P + +V++MGGA+DVPGNVF + DGSAEWN++WD PA R
Sbjct: 110 TGQQLLVDAVKSSSEPVTIVVTGPMTNIAWALDNDPSFCSNVKQVVVMGGAVDVPGNVF--NQPNHDGSAEWNVYWDAPAFHRA 191
BLAST of mRNA_Ecto-sp13_S_contig20423.6748.1 vs. uniprot
Match: A0A5D0P352_9ACTN (Nucleoside hydrolase n=5 Tax=Microbispora TaxID=2005 RepID=A0A5D0P352_9ACTN) HSP 1 Score: 98.6 bits (244), Expect = 8.780e-23 Identity = 48/79 (60.76%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 34 LAQTLLASESPVTVVATGPLTNLAWVLDNFPEASRKIDKVLIMGGAIDVPGNVFADDVEGFDGSAEWNIFWDPPAAKRV 270
LA L+ + PVTV+ATGPLTNLAW L++ PE +I++V+ MGGAIDV GNV G DG+AEWN+FWDP AAKRV
Sbjct: 114 LAAWLMRAPDPVTVLATGPLTNLAWCLEHHPEVESRIEEVVFMGGAIDVDGNVRQP---GHDGTAEWNLFWDPDAAKRV 189
BLAST of mRNA_Ecto-sp13_S_contig20423.6748.1 vs. uniprot
Match: Q57ZL6_TRYB2 (Inosine-adenosine-guanosine-nucleoside hydrolase n=5 Tax=Trypanozoon TaxID=39700 RepID=Q57ZL6_TRYB2) HSP 1 Score: 97.8 bits (242), Expect = 1.870e-22 Identity = 48/91 (52.75%), Postives = 65/91 (71.43%), Query Frame = 1
Query: 1 PMNKPTTGQLLLAQTLLASESPVTVVATGPLTNLAWVLDNFPEA-SRKIDKVLIMGGAIDVPGNVFADDVEGFDGSAEWNIFWDPPAAKRV 270
P N+ GQ LLA ++ S+ VTV TGPL+N+AW ++ + EA + K+++ +IMGGA+DV GNVF DGSAEWNI+WDPPAAK+V
Sbjct: 110 PENEAHNGQQLLADLVMKSKEKVTVCVTGPLSNMAWCIEKYGEAFTSKVEECVIMGGAVDVGGNVFLPTT---DGSAEWNIYWDPPAAKKV 197
BLAST of mRNA_Ecto-sp13_S_contig20423.6748.1 vs. uniprot
Match: UPI001CD96E33 (nucleoside hydrolase n=1 Tax=Nonomuraea sp. NEAU-L178 TaxID=2878562 RepID=UPI001CD96E33) HSP 1 Score: 97.4 bits (241), Expect = 2.300e-22 Identity = 47/79 (59.49%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 34 LAQTLLASESPVTVVATGPLTNLAWVLDNFPEASRKIDKVLIMGGAIDVPGNVFADDVEGFDGSAEWNIFWDPPAAKRV 270
LA L+ + +PVTV+ATGPLTNLAW LD+ P +I++V+ MGGA+DV GNV D DGSAEWN+FWDP A KRV
Sbjct: 113 LATWLMRAPAPVTVLATGPLTNLAWCLDHHPHVESRIEEVVFMGGALDVAGNVRQPD---HDGSAEWNVFWDPDALKRV 188
BLAST of mRNA_Ecto-sp13_S_contig20423.6748.1 vs. uniprot
Match: UPI001684244B (nucleoside hydrolase n=10 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001684244B) HSP 1 Score: 97.1 bits (240), Expect = 2.730e-22 Identity = 46/86 (53.49%), Postives = 62/86 (72.09%), Query Frame = 1
Query: 13 PTTGQLLLAQTLLASESPVTVVATGPLTNLAWVLDNFPEASRKIDKVLIMGGAIDVPGNVFADDVEGFDGSAEWNIFWDPPAAKRV 270
P +GQ +A++L + SPVT++ TGPLT +A LD PE KI+K++ MGGA++VPGNV D G DGSAEWN++WDP +A RV
Sbjct: 104 PESGQEFMARSLQTAPSPVTLMVTGPLTTVATALDMAPEIEGKIEKIVWMGGALNVPGNVSRDIEPGQDGSAEWNVYWDPISANRV 189
BLAST of mRNA_Ecto-sp13_S_contig20423.6748.1 vs. uniprot
Match: UPI00143CEEE5 (nucleoside hydrolase n=1 Tax=Allokutzneria sp. NRRL B-24872 TaxID=1137961 RepID=UPI00143CEEE5) HSP 1 Score: 96.3 bits (238), Expect = 6.030e-22 Identity = 49/79 (62.03%), Postives = 56/79 (70.89%), Query Frame = 1
Query: 34 LAQTLLASESPVTVVATGPLTNLAWVLDNFPEASRKIDKVLIMGGAIDVPGNVFADDVEGFDGSAEWNIFWDPPAAKRV 270
LAQ LLA+ PVT++ GPLTNLAW LD P KI +++ MGGAIDV GNV D G DGSAEWN+FWDP AA RV
Sbjct: 109 LAQWLLAAPEPVTLLMIGPLTNLAWCLDAHPAVESKIAELVFMGGAIDVVGNV---DEAGHDGSAEWNVFWDPGAAHRV 184 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20423.6748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20423.6748.1 >prot_Ecto-sp13_S_contig20423.6748.1 ID=prot_Ecto-sp13_S_contig20423.6748.1|Name=mRNA_Ecto-sp13_S_contig20423.6748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=92bp MNKPTTGQLLLAQTLLASESPVTVVATGPLTNLAWVLDNFPEASRKIDKVback to top mRNA from alignment at Ecto-sp13_S_contig20423:2..1092- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20423.6748.1 ID=mRNA_Ecto-sp13_S_contig20423.6748.1|Name=mRNA_Ecto-sp13_S_contig20423.6748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1091bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20423:2..1092- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20423:2..1092- >mRNA_Ecto-sp13_S_contig20423.6748.1 ID=mRNA_Ecto-sp13_S_contig20423.6748.1|Name=mRNA_Ecto-sp13_S_contig20423.6748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=276bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20423:2..1092- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |