mRNA_Ecto-sp13_S_contig20417.6743.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20417.6743.1 vs. uniprot
Match: D8LU99_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU99_ECTSI) HSP 1 Score: 300 bits (767), Expect = 5.520e-95 Identity = 142/148 (95.95%), Postives = 147/148 (99.32%), Query Frame = 1
Query: 1 VTKNGLNNQNADYGNAWYNDHTYHYGYLLYAAAVLSKFRPVFHRTYKKQLDFLVADVATMGGGRMAKYFPTARQKDFYDGHSWTSGIFPQGNGKSQESVSESINAYYGVYLLGLATGDDATKDWGRVLLAMEVRAARKYWQMPRNNGV 444
VTK+GLNNQNADYGNAWYNDHTYHYGYLLYAAAVL+KFRPVFHRTYKKQLDFLVADVATMGGG+MAKYFPTARQKDFYDGHSWTSG+FPQGNGKSQESVSESINAYYGVYLLGLATGDDA KDWGRVLLAMEVRAARKYWQMPR+NGV
Sbjct: 524 VTKDGLNNQNADYGNAWYNDHTYHYGYLLYAAAVLTKFRPVFHRTYKKQLDFLVADVATMGGGKMAKYFPTARQKDFYDGHSWTSGMFPQGNGKSQESVSESINAYYGVYLLGLATGDDAMKDWGRVLLAMEVRAARKYWQMPRHNGV 671
BLAST of mRNA_Ecto-sp13_S_contig20417.6743.1 vs. uniprot
Match: A0A6H5JC22_9PHAE (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC22_9PHAE) HSP 1 Score: 301 bits (772), Expect = 4.820e-94 Identity = 144/148 (97.30%), Postives = 145/148 (97.97%), Query Frame = 1
Query: 1 VTKNGLNNQNADYGNAWYNDHTYHYGYLLYAAAVLSKFRPVFHRTYKKQLDFLVADVATMGGGRMAKYFPTARQKDFYDGHSWTSGIFPQGNGKSQESVSESINAYYGVYLLGLATGDDATKDWGRVLLAMEVRAARKYWQMPRNNGV 444
VTKNGLNNQNADYGNAWYNDHTYHYGYLLYAAAVLSKFRPVFHRTYKKQLDFLVADVA MGGGRMAKYFPTARQKD YDGHSWTSGIFPQGNGKSQESVSESINAYYGVYL GLATGDDATKDWGRVLLAMEVRAARKYWQMPR+NGV
Sbjct: 524 VTKNGLNNQNADYGNAWYNDHTYHYGYLLYAAAVLSKFRPVFHRTYKKQLDFLVADVAAMGGGRMAKYFPTARQKDLYDGHSWTSGIFPQGNGKSQESVSESINAYYGVYLFGLATGDDATKDWGRVLLAMEVRAARKYWQMPRHNGV 671
BLAST of mRNA_Ecto-sp13_S_contig20417.6743.1 vs. uniprot
Match: A0A835YW37_9STRA (Endo-1,3(4)-beta-glucanase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW37_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.360e-57 Identity = 90/148 (60.81%), Postives = 115/148 (77.70%), Query Frame = 1
Query: 1 VTKNGLNNQNADYGNAWYNDHTYHYGYLLYAAAVLSKFRPVFHRTYKKQLDFLVADVATMGGGRMAKYFPTARQKDFYDGHSWTSGIFPQGNGKSQESVSESINAYYGVYLLGLATGDDATKDWGRVLLAMEVRAARKYWQMPRNNGV 444
VT +GLN+ AD+GN WYNDH +HYGY LYAAAV++K RP F+ Y++QLDF+V+D+A +A FPTAR KDF+DGHSW SG+F QGNGKSQES SE++NAYY VYLLG+ATG+ +DWGR+LLA E+R+ KYW M ++ V
Sbjct: 51 VTYDGLNDAAADFGNGWYNDHHFHYGYFLYAAAVVAKNRPGFYPAYRRQLDFMVSDIACHRA--LADRFPTARHKDFFDGHSWASGLFSQGNGKSQESSSEAVNAYYAVYLLGMATGNRELRDWGRILLAGELRSTDKYWHMRNDSDV 196
BLAST of mRNA_Ecto-sp13_S_contig20417.6743.1 vs. uniprot
Match: A0A835ZFG2_9STRA (Endo-1,3(4)-beta-glucanase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFG2_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.220e-50 Identity = 83/143 (58.04%), Postives = 104/143 (72.73%), Query Frame = 1
Query: 1 VTKNGLNNQNADYGNAWYNDHTYHYGYLLYAAAVLSKFRPVFHRTYKKQLDFLVADVATMGGGRMAKYFPTARQKDFYDGHSWTSGIFPQGNGKSQESVSESINAYYGVYLLGLATGDDATKDWGRVLLAMEVRAARKYWQMP 429
V+K GL ++ D+GN WYNDH +HYGY +Y AAV K+ P F+ Y++QL+ LVAD+A + FP AR KD YD HSW SG+FPQ NGKSQES+SE+INAYY V+L G+AT +DA +DWGRVL ME+RA YWQMP
Sbjct: 207 VSKRGLEDEMEDFGNGWYNDHHFHYGYFIYGAAVAIKYDPSFYTQYRRQLELLVADIANTQTN--SDLFPFARHKDMYDFHSWASGLFPQSNGKSQESISEAINAYYAVHLYGVATKNDALRDWGRVLAQMELRAGHTYWQMP 347
BLAST of mRNA_Ecto-sp13_S_contig20417.6743.1 vs. uniprot
Match: A0A7R9UB85_9STRA (Endo-1,3(4)-beta-glucanase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB85_9STRA) HSP 1 Score: 169 bits (429), Expect = 2.450e-46 Identity = 86/161 (53.42%), Postives = 108/161 (67.08%), Query Frame = 1
Query: 1 VTKNGLNNQNADYGNAWYNDHTYHYGYLLYAAAVLSKFRPVFHRTYKKQLDFLVADVATM----GGG---------RMAKYFPTARQKDFYDGHSWTSGIFPQGNGKSQESVSESINAYYGVYLLGLATGDDATKDWGRVLLAMEVRAARKYWQMPRNNGV 444
VT+NGL ++ ADYGN WYNDH +HYGY +YAAAVL KF P + TY +D LV D+A G G FPTARQKD++DGHSW SG+FPQGNGKSQES SE++NAYY V L GLATG+ + WG LL+ E+ AA+ Y+ + R+N +
Sbjct: 517 VTRNGLQDKQADYGNGWYNDHHFHYGYFIYAAAVLVKFHPDWASTYGLAVDSLVRDIAAQLPESGNGPEDLSRSQPAADPLFPTARQKDWFDGHSWASGLFPQGNGKSQESSSEAVNAYYAVSLYGLATGNAELQKWGSFLLSSEIHAAQYYYHIGRDNTI 677
BLAST of mRNA_Ecto-sp13_S_contig20417.6743.1 vs. uniprot
Match: A0A7S3XS68_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS68_HETAK) HSP 1 Score: 159 bits (401), Expect = 3.060e-44 Identity = 75/142 (52.82%), Postives = 96/142 (67.61%), Query Frame = 1
Query: 1 VTKNGLNNQNADYGNAWYNDHTYHYGYLLYAAAVLSKFRPVFHRTYKKQLDFLVADVATMGGGRMAKYFPTARQKDFYDGHSWTSGIFPQGNGKSQESVSESINAYYGVYLLGLATGDDATKDWGRVLLAMEVRAARKYWQM 426
V+ GL + AD+GN WYNDH +HYGY LY AVL KF P ++ ++ +D L+ D+A + FP AR KDFYD HSW G+F +GKSQES SE++NAYYGVYL GLATGD DWG++LL+ME+ A + YW M
Sbjct: 142 VSSMGLQSWAADFGNGWYNDHHFHYGYFLYTLAVLIKFDPAYYSKHQGAIDLLLGDIANRDPE--SPLFPVARHKDFYDHHSWALGLFTTWDGKSQESSSEAVNAYYGVYLFGLATGDQKFADWGQILLSMELSAGKLYWHM 281
BLAST of mRNA_Ecto-sp13_S_contig20417.6743.1 vs. uniprot
Match: A0A6S8U7P2_9STRA (Endo-1,3(4)-beta-glucanase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8U7P2_9STRA) HSP 1 Score: 157 bits (397), Expect = 8.440e-42 Identity = 84/150 (56.00%), Postives = 101/150 (67.33%), Query Frame = 1
Query: 1 VTKNGLNNQNADYGNAWYNDHTYHYGYLLYAAAVLSKFRPVFHRTYKKQLDFLVADVATMGGGRM-------AKYFPTARQKDFYDGHSWTSGIFPQGNGKSQESVSESINAYYGVYLLGLATGDDATKDWGRVLLAMEVRAARKYWQMP 429
VT+ GL + +AD+GN +YNDH +HYGYLL+AAAV K F +++ L L+ DVA+ G G A+ FP AR KDFY GHSW SGIF G GK+QES SE+ NAYYG YLL L+ GD A DW R LLAMEVRAAR Y+ MP
Sbjct: 532 VTEKGLYDHDADFGNGYYNDHHFHYGYLLHAAAVAVKNDAGFAAKHRRALFALLYDVASPGSGHSLDSVDVDARAFPRARHKDFYAGHSWASGIFFMGQGKAQESSSEAANAYYGAYLLALSLGDVALADWCRTLLAMEVRAARYYYHMP 681
BLAST of mRNA_Ecto-sp13_S_contig20417.6743.1 vs. uniprot
Match: A0A7S2LFJ3_9STRA (Endo-1,3(4)-beta-glucanase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LFJ3_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.120e-41 Identity = 78/141 (55.32%), Postives = 95/141 (67.38%), Query Frame = 1
Query: 1 VTKNGLNNQNADYGNAWYNDHTYHYGYLLYAAAVLSKFRPVFHRTYKKQLDFLVADVATMGGGRMAKYFPTARQKDFYDGHSWTSGIFPQGNGKSQESVSESINAYYGVYLLGLATGDDATKDWGRVLLAMEVRAARKYWQ 423
+T GL+N+ AD+GN YNDH +HYGYL YA AV+ KF F Y +D +VADVA + YFP AR K +YDGHSW SG+FPQGNGKSQES SE++N YYGVYL + GD + R+LLA E+R AR YWQ
Sbjct: 384 ITTLGLDNKMADFGNGRYNDHHFHYGYLAYACAVVGKFDTSFVEQYGDVIDAIVADVAN--DDPHSPYFPIARHKSWYDGHSWASGLFPQGNGKSQESSSEAVNCYYGVYLWSIVRGDQYMNYFARLLLATEIRGARTYWQ 522
BLAST of mRNA_Ecto-sp13_S_contig20417.6743.1 vs. uniprot
Match: A0A7S2S5N5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5N5_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.200e-40 Identity = 71/144 (49.31%), Postives = 99/144 (68.75%), Query Frame = 1
Query: 13 GLNNQNADYGNAWYNDHTYHYGYLLYAAAVLSKFRPVFHRTYKKQLDFLVADVATMGGGRMAKYFPTARQKDFYDGHSWTSGIFPQGNGKSQESVSESINAYYGVYLLGLATGDDATKDWGRVLLAMEVRAARKYWQMPRNNGV 444
GL ++NAD+GN +YNDH YHYGYL+YA +V+ F P + +++ + L+ D+A G + +FP AR KDF+DGHSW SG+F Q NGKSQESVSE+INAYYG LL A + A + +LL+ E+ AA+ YWQ+P + +
Sbjct: 183 GLEDKNADFGNGYYNDHHYHYGYLMYALSVVVHFNPGYGLEHRQAILALLYDIAAPSGA--SSFFPMARHKDFFDGHSWASGLFSQANGKSQESVSEAINAYYGAALLAQAMNETALASFASLLLSTEISAAQTYWQIPNSTEI 324
BLAST of mRNA_Ecto-sp13_S_contig20417.6743.1 vs. uniprot
Match: A0A7S1BTV3_9STRA (Endo-1,3(4)-beta-glucanase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BTV3_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.230e-40 Identity = 77/141 (54.61%), Postives = 96/141 (68.09%), Query Frame = 1
Query: 1 VTKNGLNNQNADYGNAWYNDHTYHYGYLLYAAAVLSKFRPVFHRTYKKQLDFLVADVATMGGGRMAKYFPTARQKDFYDGHSWTSGIFPQGNGKSQESVSESINAYYGVYLLGLATGDDATKDWGRVLLAMEVRAARKYWQ 423
VT NGL + AD+GN YNDH +HYGYL+YAAAVL++F P F + + LV DVA G ++P AR K +YDGHSW SG+FPQ +GKSQESVSE++N YY V L L T DD ++ R+LLAME+R A YWQ
Sbjct: 540 VTHNGLRDPQADFGNGRYNDHHFHYGYLIYAAAVLTRFDPSFVDDHGNHISALVKDVANYDPGD--PHYPLARHKSWYDGHSWASGLFPQSDGKSQESVSEAVNCYYAVGLWALVTRDDTLHNFSRLLLAMEIRGAHYYWQ 678 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20417.6743.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20417.6743.1 >prot_Ecto-sp13_S_contig20417.6743.1 ID=prot_Ecto-sp13_S_contig20417.6743.1|Name=mRNA_Ecto-sp13_S_contig20417.6743.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp VTKNGLNNQNADYGNAWYNDHTYHYGYLLYAAAVLSKFRPVFHRTYKKQLback to top mRNA from alignment at Ecto-sp13_S_contig20417:173..1413+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20417.6743.1 ID=mRNA_Ecto-sp13_S_contig20417.6743.1|Name=mRNA_Ecto-sp13_S_contig20417.6743.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1241bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20417:173..1413+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20417:173..1413+ >mRNA_Ecto-sp13_S_contig20417.6743.1 ID=mRNA_Ecto-sp13_S_contig20417.6743.1|Name=mRNA_Ecto-sp13_S_contig20417.6743.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=444bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20417:173..1413+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |