mRNA_Ecto-sp13_S_contig20411.6741.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig20411.6741.1
Unique NamemRNA_Ecto-sp13_S_contig20411.6741.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig20411.6741.1 vs. uniprot
Match: D8LBW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBW0_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 5.510e-54
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 1 
Query:    1 VLRMYTAQMEELQLFRGDTVLIKGKKSRDTVCIVLADDSVDDSSIRMNKVVRKNLRVRLGDLITVSACGDVPYGKRVHVLPVDDTIEGVTGNLFDVYLK 297
            V+ + TA+MEELQLFRGDTVLIKGKKSRDTVCIVLADDSVDDSSIRMNKVVRKNLRVRLGDLITVSACGDVPYGKRVHVLPVDDTIEGVTGNLFDVYLK
Sbjct:   38 VVALSTAKMEELQLFRGDTVLIKGKKSRDTVCIVLADDSVDDSSIRMNKVVRKNLRVRLGDLITVSACGDVPYGKRVHVLPVDDTIEGVTGNLFDVYLK 136
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BLAST of mRNA_Ecto-sp13_S_contig20411.6741.1 vs. uniprot
Match: A0A7S0AI88_9STRA (Hypothetical protein (Fragment) n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S0AI88_9STRA)

HSP 1 Score: 172 bits (437), Expect = 7.620e-53
Identity = 80/99 (80.81%), Postives = 94/99 (94.95%), Query Frame = 1 
Query:    1 VLRMYTAQMEELQLFRGDTVLIKGKKSRDTVCIVLADDSVDDSSIRMNKVVRKNLRVRLGDLITVSACGDVPYGKRVHVLPVDDTIEGVTGNLFDVYLK 297
            V+++  A+MEELQLFRGDTVLIKGKK RDTVCIVL+DD+ DDS++RMNKVVRKNLRVRL D++TV++CGDVPYGKR+HVLP+DDTIEGVTGNLFDVYLK
Sbjct:   44 VIQLSPAKMEELQLFRGDTVLIKGKKGRDTVCIVLSDDACDDSAVRMNKVVRKNLRVRLADVVTVTSCGDVPYGKRIHVLPLDDTIEGVTGNLFDVYLK 142
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BLAST of mRNA_Ecto-sp13_S_contig20411.6741.1 vs. uniprot
Match: A0A662YF31_9STRA (CDC48_N domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YF31_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.160e-51
Identity = 77/99 (77.78%), Postives = 92/99 (92.93%), Query Frame = 1 
Query:    1 VLRMYTAQMEELQLFRGDTVLIKGKKSRDTVCIVLADDSVDDSSIRMNKVVRKNLRVRLGDLITVSACGDVPYGKRVHVLPVDDTIEGVTGNLFDVYLK 297
            V+ +  A+MEELQLFRGDTVLIKGKK  DTVC+VL D++VDD+++RMNKVVRKNLRVRLGD+++V+ CGDVPYGKR+HVLP+DDTIEGVTGNLFDVYLK
Sbjct:   80 VIALSMAKMEELQLFRGDTVLIKGKKGHDTVCVVLQDETVDDANVRMNKVVRKNLRVRLGDVVSVTTCGDVPYGKRIHVLPIDDTIEGVTGNLFDVYLK 178
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BLAST of mRNA_Ecto-sp13_S_contig20411.6741.1 vs. uniprot
Match: A0A7S2N646_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2N646_9DINO)

HSP 1 Score: 169 bits (427), Expect = 1.540e-51
Identity = 80/99 (80.81%), Postives = 90/99 (90.91%), Query Frame = 1 
Query:    1 VLRMYTAQMEELQLFRGDTVLIKGKKSRDTVCIVLADDSVDDSSIRMNKVVRKNLRVRLGDLITVSACGDVPYGKRVHVLPVDDTIEGVTGNLFDVYLK 297
            V+ +  A+MEEL LFRGD VLIKGKK +DTVCIVLADD++DDS IRMNKVVRKNLRVRLGD+I+V ACGDVPYGKRVHVLP+DDTIEG+TGNLFD YLK
Sbjct:   49 VISLSQAKMEELNLFRGDNVLIKGKKRKDTVCIVLADDNLDDSKIRMNKVVRKNLRVRLGDIISVHACGDVPYGKRVHVLPLDDTIEGITGNLFDTYLK 147
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BLAST of mRNA_Ecto-sp13_S_contig20411.6741.1 vs. uniprot
Match: A0A836CHQ0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ0_9STRA)

HSP 1 Score: 180 bits (456), Expect = 8.010e-51
Identity = 84/99 (84.85%), Postives = 96/99 (96.97%), Query Frame = 1 
Query:    1 VLRMYTAQMEELQLFRGDTVLIKGKKSRDTVCIVLADDSVDDSSIRMNKVVRKNLRVRLGDLITVSACGDVPYGKRVHVLPVDDTIEGVTGNLFDVYLK 297
            V+ +  A+MEELQLFRGDTVL+KGKK+RDTVCIVLADD+VDDSSIRMNKVVRKNLRVRLGDL++++ACGDVPYGKR+HVLP+DDTIEGVTGNLFDVYLK
Sbjct:   33 VVALSNAKMEELQLFRGDTVLVKGKKNRDTVCIVLADDTVDDSSIRMNKVVRKNLRVRLGDLVSIAACGDVPYGKRIHVLPIDDTIEGVTGNLFDVYLK 131
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BLAST of mRNA_Ecto-sp13_S_contig20411.6741.1 vs. uniprot
Match: A0A7S2Y826_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y826_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.670e-50
Identity = 74/99 (74.75%), Postives = 93/99 (93.94%), Query Frame = 1 
Query:    1 VLRMYTAQMEELQLFRGDTVLIKGKKSRDTVCIVLADDSVDDSSIRMNKVVRKNLRVRLGDLITVSACGDVPYGKRVHVLPVDDTIEGVTGNLFDVYLK 297
            V+ +  A+ME+L+LFRGDTVLIKGKK +DTVCIVLAD++ DD+++RMNKVVRKNLRVRL D++TV++CGDVPYGKR+H+LP+DDTIEGV+GNLFDVYLK
Sbjct:   36 VISLSPAKMEQLELFRGDTVLIKGKKGKDTVCIVLADETCDDTAVRMNKVVRKNLRVRLADVVTVTSCGDVPYGKRIHILPLDDTIEGVSGNLFDVYLK 134
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BLAST of mRNA_Ecto-sp13_S_contig20411.6741.1 vs. uniprot
Match: A0A7S4V022_9DINO (Hypothetical protein (Fragment) n=5 Tax=Alexandrium TaxID=2924 RepID=A0A7S4V022_9DINO)

HSP 1 Score: 167 bits (422), Expect = 5.140e-50
Identity = 78/99 (78.79%), Postives = 90/99 (90.91%), Query Frame = 1 
Query:    1 VLRMYTAQMEELQLFRGDTVLIKGKKSRDTVCIVLADDSVDDSSIRMNKVVRKNLRVRLGDLITVSACGDVPYGKRVHVLPVDDTIEGVTGNLFDVYLK 297
            V+ +  A+MEEL LFRGD VLIKGKK +DTVCIVLAD+++DDS IRMNKVVRKNLRVRLGD+++V ACGDVPYGKRVHVLP+DDTIEG+TGNLFD YLK
Sbjct:   65 VISLSQAKMEELNLFRGDNVLIKGKKRKDTVCIVLADENLDDSKIRMNKVVRKNLRVRLGDIVSVHACGDVPYGKRVHVLPLDDTIEGITGNLFDTYLK 163
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BLAST of mRNA_Ecto-sp13_S_contig20411.6741.1 vs. uniprot
Match: UPI00077A6C28 (transitional endoplasmic reticulum ATPase-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A6C28)

HSP 1 Score: 164 bits (414), Expect = 1.500e-49
Identity = 76/99 (76.77%), Postives = 89/99 (89.90%), Query Frame = 1 
Query:    1 VLRMYTAQMEELQLFRGDTVLIKGKKSRDTVCIVLADDSVDDSSIRMNKVVRKNLRVRLGDLITVSACGDVPYGKRVHVLPVDDTIEGVTGNLFDVYLK 297
            V+ M  A+MEELQLFRGDTVLIKGKK RDTVCIVL+DDS+ D  IRMN+VVR+NLRVRLGD+++V AC DV YGKR+HVLP+DDT+EG+TGNLFDVYLK
Sbjct:   33 VVSMSQAKMEELQLFRGDTVLIKGKKRRDTVCIVLSDDSISDDKIRMNRVVRRNLRVRLGDIVSVQACPDVKYGKRIHVLPIDDTVEGLTGNLFDVYLK 131
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BLAST of mRNA_Ecto-sp13_S_contig20411.6741.1 vs. uniprot
Match: A0A812P3G3_9DINO (CDC48A protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812P3G3_9DINO)

HSP 1 Score: 167 bits (422), Expect = 3.750e-49
Identity = 78/99 (78.79%), Postives = 90/99 (90.91%), Query Frame = 1 
Query:    1 VLRMYTAQMEELQLFRGDTVLIKGKKSRDTVCIVLADDSVDDSSIRMNKVVRKNLRVRLGDLITVSACGDVPYGKRVHVLPVDDTIEGVTGNLFDVYLK 297
            V+ +  A+MEEL LFRGD VLIKGKK +DTVCIVLAD+++DDS IRMNKVVRKNLRVRLGD+I+V ACGDVPYGKR+HVLP+DDTIEG+TGNLFD YLK
Sbjct:   38 VISLSQAKMEELNLFRGDNVLIKGKKRKDTVCIVLADENLDDSKIRMNKVVRKNLRVRLGDIISVHACGDVPYGKRIHVLPLDDTIEGITGNLFDTYLK 136
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BLAST of mRNA_Ecto-sp13_S_contig20411.6741.1 vs. uniprot
Match: A0A813H340_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H340_POLGL)

HSP 1 Score: 162 bits (410), Expect = 7.090e-49
Identity = 75/99 (75.76%), Postives = 88/99 (88.89%), Query Frame = 1 
Query:    1 VLRMYTAQMEELQLFRGDTVLIKGKKSRDTVCIVLADDSVDDSSIRMNKVVRKNLRVRLGDLITVSACGDVPYGKRVHVLPVDDTIEGVTGNLFDVYLK 297
            V+ +  A+MEEL LFRGD VLIKGKK +DTVCIVLADD++DD  IR+N+VVRKNLR RLGD+++V ACGDVPYGKRVHVLP+DDTIEG+TGNLFD YLK
Sbjct:   40 VISLSQAKMEELNLFRGDNVLIKGKKRKDTVCIVLADDNLDDGKIRLNEVVRKNLRCRLGDIVSVHACGDVPYGKRVHVLPLDDTIEGITGNLFDTYLK 138
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20411.6741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBW0_ECTSI5.510e-5494.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0AI88_9STRA7.620e-5380.81Hypothetical protein (Fragment) n=2 Tax=Bacillario... [more]
A0A662YF31_9STRA1.160e-5177.78CDC48_N domain-containing protein (Fragment) n=1 T... [more]
A0A7S2N646_9DINO1.540e-5180.81Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A836CHQ0_9STRA8.010e-5184.85P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2Y826_9STRA1.670e-5074.75Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S4V022_9DINO5.140e-5078.79Hypothetical protein (Fragment) n=5 Tax=Alexandriu... [more]
UPI00077A6C281.500e-4976.77transitional endoplasmic reticulum ATPase-like n=1... [more]
A0A812P3G3_9DINO3.750e-4978.79CDC48A protein (Fragment) n=1 Tax=Symbiodinium nec... [more]
A0A813H340_POLGL7.090e-4975.76Hypothetical protein n=1 Tax=Polarella glacialis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig20411contigEcto-sp13_S_contig20411:361..1508 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score188.7
Seed ortholog evalue1.2e-45
Seed eggNOG ortholog2880.D8LBW0
Preferred nameVCP
Model size297
KEGG koko:K13525
KEGG TC3.A.16.1
KEGG Pathwayko04141,ko05134,map04141,map05134
KEGG ModuleM00400,M00403
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000151,GO:0000153,GO:0000166,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000323,GO:0000502,GO:0000731,GO:0000785,GO:0000790,GO:0000819,GO:0000835,GO:0000836,GO:0000837,GO:0000839,GO:0000902,GO:0000904,GO:0001775,GO:0002020,GO:0002082,GO:0002165,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003006,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005764,GO:0005766,GO:0005767,GO:0005773,GO:0005775,GO:0005776,GO:0005783,GO:0005789,GO:0005811,GO:0005819,GO:0005829,GO:0005856,GO:0005937,GO:0006139,GO:0006140,GO:0006163,GO:0006259,GO:0006281,GO:0006301,GO:0006302,GO:0006355,GO:0006357,GO:0006401,GO:0006457,GO:0006464,GO:0006486,GO:0006487,GO:0006508,GO:0006511,GO:0006515,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006887,GO:0006888,GO:0006914,GO:0006919,GO:0006950,GO:0006955,GO:0006974,GO:0006984,GO:0006986,GO:0006991,GO:0006996,GO:0007010,GO:0007017,GO:0007029,GO:0007030,GO:0007033,GO:0007034,GO:0007040,GO:0007041,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007154,GO:0007163,GO:0007165,GO:0007275,GO:0007276,GO:0007277,GO:0007279,GO:0007317,GO:0007349,GO:0007399,GO:0007552,GO:0007610,GO:0007626,GO:0008047,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008333,GO:0008608,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009109,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009615,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009886,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010256,GO:0010467,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010623,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010918,GO:0010921,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016070,GO:0016072,GO:0016075,GO:0016192,GO:0016197,GO:0016236,GO:0016237,GO:0016320,GO:0016358,GO:0016462,GO:0016485,GO:0016504,GO:0016567,GO:0016579,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0018130,GO:0018193,GO:0018196,GO:0018279,GO:0019058,GO:0019079,GO:0019208,GO:0019219,GO:0019220,GO:0019222,GO:0019362,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019725,GO:0019867,GO:0019888,GO:0019899,GO:0019902,GO:0019903,GO:0019904,GO:0019941,GO:0019953,GO:0019985,GO:0022008,GO:0022402,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030030,GO:0030111,GO:0030141,GO:0030154,GO:0030162,GO:0030163,GO:0030177,GO:0030178,GO:0030182,GO:0030234,GO:0030427,GO:0030433,GO:0030554,GO:0030808,GO:0030810,GO:0030968,GO:0030970,GO:0031056,GO:0031058,GO:0031090,GO:0031134,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031410,GO:0031593,GO:0031625,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031983,GO:0031984,GO:0032182,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032509,GO:0032510,GO:0032527,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032933,GO:0032940,GO:0032984,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033182,GO:0033184,GO:0033365,GO:0033554,GO:0034067,GO:0034098,GO:0034214,GO:0034404,GO:0034517,GO:0034613,GO:0034620,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034660,GO:0034661,GO:0034727,GO:0034774,GO:0034976,GO:0035069,GO:0035096,GO:0035103,GO:0035303,GO:0035304,GO:0035578,GO:0035639,GO:0035770,GO:0035800,GO:0035861,GO:0035966,GO:0035967,GO:0035973,GO:0036094,GO:0036211,GO:0036230,GO:0036266,GO:0036435,GO:0036464,GO:0036503,GO:0036513,GO:0042119,GO:0042175,GO:0042176,GO:0042221,GO:0042287,GO:0042288,GO:0042325,GO:0042327,GO:0042391,GO:0042582,GO:0042592,GO:0042726,GO:0042728,GO:0042802,GO:0042886,GO:0042981,GO:0042995,GO:0043009,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043086,GO:0043130,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043186,GO:0043207,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043280,GO:0043281,GO:0043299,GO:0043312,GO:0043332,GO:0043412,GO:0043413,GO:0043457,GO:0043467,GO:0043523,GO:0043525,GO:0043531,GO:0043624,GO:0043632,GO:0043666,GO:0043900,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044389,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044429,GO:0044430,GO:0044432,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044454,GO:0044455,GO:0044463,GO:0044464,GO:0044703,GO:0044754,GO:0044804,GO:0044877,GO:0045055,GO:0045169,GO:0045184,GO:0045321,GO:0045495,GO:0045595,GO:0045732,GO:0045838,GO:0045862,GO:0045893,GO:0045934,GO:0045935,GO:0045937,GO:0045944,GO:0045981,GO:0045995,GO:0046034,GO:0046434,GO:0046483,GO:0046496,GO:0046596,GO:0046598,GO:0046686,GO:0046700,GO:0046716,GO:0046903,GO:0046907,GO:0048193,GO:0048284,GO:0048285,GO:0048468,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048731,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050790,GO:0050792,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051186,GO:0051187,GO:0051228,GO:0051230,GO:0051233,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051276,GO:0051286,GO:0051304,GO:0051306,GO:0051336,GO:0051338,GO:0051345,GO:0051348,GO:0051603,GO:0051604,GO:0051640,GO:0051641,GO:0051643,GO:0051649,GO:0051656,GO:0051686,GO:0051704,GO:0051707,GO:0051716,GO:0051788,GO:0051881,GO:0051972,GO:0051974,GO:0052547,GO:0052548,GO:0055085,GO:0055086,GO:0060033,GO:0060090,GO:0060205,GO:0060249,GO:0060255,GO:0060281,GO:0060284,GO:0060293,GO:0060341,GO:0060828,GO:0061024,GO:0061025,GO:0061134,GO:0061136,GO:0061163,GO:0061164,GO:0061165,GO:0061166,GO:0061857,GO:0061912,GO:0061919,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070085,GO:0070646,GO:0070647,GO:0070651,GO:0070727,GO:0070841,GO:0070842,GO:0070887,GO:0070987,GO:0071218,GO:0071241,GO:0071248,GO:0071276,GO:0071310,GO:0071501,GO:0071629,GO:0071630,GO:0071702,GO:0071704,GO:0071705,GO:0071712,GO:0071840,GO:0071897,GO:0071985,GO:0072387,GO:0072389,GO:0072521,GO:0072524,GO:0072671,GO:0072686,GO:0080090,GO:0080171,GO:0090085,GO:0090090,GO:0090174,GO:0090263,GO:0090304,GO:0090734,GO:0097159,GO:0097352,GO:0097367,GO:0097708,GO:0098586,GO:0098588,GO:0098772,GO:0098796,GO:0098798,GO:0098799,GO:0098805,GO:0098813,GO:0098827,GO:0099503,GO:0101002,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:0140014,GO:0140030,GO:1900180,GO:1900182,GO:1900371,GO:1900373,GO:1900542,GO:1900544,GO:1901135,GO:1901137,GO:1901214,GO:1901216,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1901800,GO:1902275,GO:1902494,GO:1902680,GO:1902850,GO:1902875,GO:1903003,GO:1903004,GO:1903006,GO:1903007,GO:1903008,GO:1903047,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1903429,GO:1903506,GO:1903508,GO:1903513,GO:1903578,GO:1903580,GO:1903715,GO:1903827,GO:1903829,GO:1903862,GO:1903900,GO:1903902,GO:1904288,GO:1904580,GO:1904813,GO:1904949,GO:1905269,GO:1905368,GO:1905369,GO:1905879,GO:1990023,GO:1990112,GO:1990116,GO:1990171,GO:1990234,GO:1990381,GO:1990730,GO:1990904,GO:2000026,GO:2000058,GO:2000060,GO:2000112,GO:2000113,GO:2000116,GO:2000152,GO:2000158,GO:2000241,GO:2000278,GO:2000279,GO:2001056,GO:2001141,GO:2001166,GO:2001168,GO:2001169,GO:2001171,GO:2001252
Exons3
EggNOG free text desc.ATP binding
EggNOG OGsCOG0464@1,KOG0730@2759
Cds size288
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko04131,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463023.916385-UTR-Ecto-sp13_S_contig20411:360..3691681463023.916385-UTR-Ecto-sp13_S_contig20411:360..369Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig20411 361..369 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463023.9375436-CDS-Ecto-sp13_S_contig20411:369..5071681463023.9375436-CDS-Ecto-sp13_S_contig20411:369..507Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig20411 370..507 +
1681463023.9478905-CDS-Ecto-sp13_S_contig20411:784..9001681463023.9478905-CDS-Ecto-sp13_S_contig20411:784..900Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig20411 785..900 +
1681463023.9579647-CDS-Ecto-sp13_S_contig20411:1474..15081681463023.9579647-CDS-Ecto-sp13_S_contig20411:1474..1508Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig20411 1475..1508 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig20411.6741.1prot_Ecto-sp13_S_contig20411.6741.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig20411 370..1508 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig20411.6741.1

>prot_Ecto-sp13_S_contig20411.6741.1 ID=prot_Ecto-sp13_S_contig20411.6741.1|Name=mRNA_Ecto-sp13_S_contig20411.6741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=96bp
MYTAQMEELQLFRGDTVLIKGKKSRDTVCIVLADDSVDDSSIRMNKVVRK
NLRVRLGDLITVSACGDVPYGKRVHVLPVDDTIEGVTGNLFDVYLK
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mRNA from alignment at Ecto-sp13_S_contig20411:361..1508+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig20411.6741.1 ID=mRNA_Ecto-sp13_S_contig20411.6741.1|Name=mRNA_Ecto-sp13_S_contig20411.6741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1148bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20411:361..1508+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTGTTGCGCATGTATACCGCGCAGATGGAAGAGCTGCAGCTCTTCCGGGG
TGACACGGTCCTGATCAAGGGGAAGAAGAGCAGGGACACGGTCTGCATCG
TGCTGGCCGACGACTCCGTAGACGACTCGAGCATCCGCATGAACAAGGTG
TGCGAATCTCCATGCCCCGGGTGCTATTCTATCTCTTGTCTTTTTGTTTT
ATGTTCTCCTCTCGAAAATAAGGCAACACGCGTACCGGTGCGAGATGGGC
GCTCGCGCGGCAAGCTTTGGTGGGATGTCCGGGAAGCTATGCATACGATG
TCCGAAACGTGGTCTCGGATCCCTCGGACGACAACACAGGTTTTGTTTTT
GTTTTTTTTCGTGTGTTGGGGAGTTTGATCACATTCTTTCCGGTGCCGTT
GGCGGGGGGAATACTTACTTGCAGGTTGTGCGGAAGAACCTGCGGGTGCG
GCTGGGCGACCTCATCACGGTCTCGGCCTGCGGAGACGTGCCCTATGGCA
AGCGCGTGCACGTGCTTCCCGTGGATGACACCATCGAGGGGTAAGTTCAT
TCGACGATATCGATCATCGCCCTTGGCGTTTGAGTGGTGGGAGTCTTGGG
GGTCCCCCCGGACGGCGGGCTAGAGTTTTCGGTAGTGTGACATTTGAGTG
GTGCGATCCTTCAAGCGTCGTCGGGTTTCGTTTTCACGGAAAAAATCGGG
AGTGCTGTCGTCGTGGCTGGCTCTGGTTCTAGCTGGCATCGCGTGGGCAC
GTGTCACCCCCCCTCCCCTCTGCCATGCCCGTCTCCCGCCGAACTGTCGG
TTTTCTCGCGGGGTTGTTTTTTCTCTCTACGGCGTGTTTGAGTCGGTTTG
CTGCAATGTCAATGTTGTTTCGCGCGTTCGGCCTACGTTGAGGTCGCTCT
CGCTGTCTTCTCGTCCAGGAGGGTTACCGGTGCTCAATTTAGCAGCCACA
GACCGAAGCAGATCGCCGTGCCCAACTAAGTCGTTACCACGCATGCACGC
TCTCGCCGCGCGCTCTGTCCTCCCCTCCCCCCCCCTCCTTTTCGATGGTG
CTCTTTTGGTGGGTGCGTTCTGTCGATTGTTTGTTCCGCCGTCGTCATCG
TCACGGGTAAAAAGTGTTACCGGAAACCTGTTCGACGTGTACCTGAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20411:361..1508+

>mRNA_Ecto-sp13_S_contig20411.6741.1 ID=mRNA_Ecto-sp13_S_contig20411.6741.1|Name=mRNA_Ecto-sp13_S_contig20411.6741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=288bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20411:361..1508+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTATACCGCGCAGATGGAAGAGCTGCAGCTCTTCCGGGGTGACACGGT
CCTGATCAAGGGGAAGAAGAGCAGGGACACGGTCTGCATCGTGCTGGCCG
ACGACTCCGTAGACGACTCGAGCATCCGCATGAACAAGGTTGTGCGGAAG
AACCTGCGGGTGCGGCTGGGCGACCTCATCACGGTCTCGGCCTGCGGAGA
CGTGCCCTATGGCAAGCGCGTGCACGTGCTTCCCGTGGATGACACCATCG
AGGGTGTTACCGGAAACCTGTTCGACGTGTACCTGAAG
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