mRNA_Ecto-sp13_S_contig20382.6727.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20382.6727.1 vs. uniprot
Match: A0A6H5KUR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR8_9PHAE) HSP 1 Score: 215 bits (547), Expect = 1.980e-62 Identity = 102/117 (87.18%), Postives = 110/117 (94.02%), Query Frame = 1
Query: 19 AVLEASMLNSNCQALYTQNISNGLRDEQLMMLANVLRRGNIWCLNTGENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIPIGLKKVMRTAIRDNKVKHTRHKSASNVKLIRRCTKVW 369
AVLEA MLN+NCQALY QN+SNGLRDEQLMMLA VLR+GNIWCLN GENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIP+GLKK MRTAIR N+VKHTRHKSASNVK+IR+CT +W
Sbjct: 755 AVLEALMLNNNCQALYIQNVSNGLRDEQLMMLARVLRKGNIWCLNAGENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIPVGLKKAMRTAIRANRVKHTRHKSASNVKVIRQCTNMW 871
BLAST of mRNA_Ecto-sp13_S_contig20382.6727.1 vs. uniprot
Match: A0A6H5JA48_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA48_9PHAE) HSP 1 Score: 200 bits (508), Expect = 3.820e-61 Identity = 98/111 (88.29%), Postives = 104/111 (93.69%), Query Frame = 1
Query: 19 AVLEASMLNSNCQALYTQNISNGLRDEQLMMLANVLRRGNIWCLNTGENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIPIGLKKVMRTAIRDNKVKHTRHKSASNVKLIR 351
AVLEA MLN+NCQALY QN+SNGLRDEQ+MMLA VLRRGNIWCLN GENSKIKPSTW DFVKEI+KTGVTHAYLSEECIPIGLKK MRTAIR N+VKHTRHKSASNVK+IR
Sbjct: 250 AVLEALMLNNNCQALYIQNVSNGLRDEQIMMLAKVLRRGNIWCLNAGENSKIKPSTWRDFVKEIDKTGVTHAYLSEECIPIGLKKAMRTAIRANRVKHTRHKSASNVKVIR 360
BLAST of mRNA_Ecto-sp13_S_contig20382.6727.1 vs. uniprot
Match: A0A6H5K7R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R7_9PHAE) HSP 1 Score: 211 bits (536), Expect = 7.520e-61 Identity = 103/117 (88.03%), Postives = 109/117 (93.16%), Query Frame = 1
Query: 19 AVLEASMLNSNCQALYTQNISNGLRDEQLMMLANVLRRGNIWCLNTGENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIPIGLKKVMRTAIRDNKVKHTRHKSASNVKLIRRCTKVW 369
AVLEA MLN NCQALY QN+SNGLRDEQLMMLA VLR+GNIWCLN GENSKIKPSTWCDFVKEI+KTGVTHAYLSEECIPIGLKK MRTAIR N+VKHTRHKSASNVK+IRRCT +W
Sbjct: 816 AVLEALMLN-NCQALYIQNVSNGLRDEQLMMLAKVLRKGNIWCLNAGENSKIKPSTWCDFVKEIDKTGVTHAYLSEECIPIGLKKAMRTAIRANRVKHTRHKSASNVKVIRRCTNMW 931
BLAST of mRNA_Ecto-sp13_S_contig20382.6727.1 vs. uniprot
Match: D8LFH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH6_ECTSI) HSP 1 Score: 173 bits (439), Expect = 9.600e-51 Identity = 85/118 (72.03%), Postives = 96/118 (81.36%), Query Frame = 1
Query: 16 HAVLEASMLNSNCQALYTQNISNGLRDEQLMMLANVLRRGNIWCLNTGENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIPIGLKKVMRTAIRDNKVKHTRHKSASNVKLIRRCTKVW 369
+AVL+A M NSNCQALY QN+S G RDEQL MLA VLRRGNIWCLN GENS I PS W FV+EI+ T VTHAYLSEECIP GL + M+ AIR N+ KHTRHKSASNV++IRRCT +W
Sbjct: 249 NAVLKALMCNSNCQALYIQNVSIGFRDEQLRMLAKVLRRGNIWCLNAGENSGITPSAWWWFVEEIKTTSVTHAYLSEECIPCGLTETMQKAIRANRAKHTRHKSASNVEVIRRCTNMW 366
BLAST of mRNA_Ecto-sp13_S_contig20382.6727.1 vs. uniprot
Match: A0A6H5JNB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB8_9PHAE) HSP 1 Score: 168 bits (425), Expect = 6.910e-46 Identity = 82/117 (70.09%), Postives = 95/117 (81.20%), Query Frame = 1
Query: 19 AVLEASMLNSNCQALYTQNISNGLRDEQLMMLANVLRRGNIWCLNTGENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIPIGLKKVMRTAIRDNKVKHTRHKSASNVKLIRRCTKVW 369
AVLEA M+NSNCQALY QN+SNG RDEQLM LA VLRRG IWCLN GENS+IK STW +FV+EI+ T VTHAYLSE +P GLK M+ AIR N++KH RH SASNV +I+RCT +W
Sbjct: 620 AVLEALMINSNCQALYIQNVSNGFRDEQLMRLAEVLRRGLIWCLNAGENSEIKASTWWNFVEEIQNTNVTHAYLSEGSVPSGLKNAMQKAIRRNRLKHDRHLSASNVDVIQRCTHMW 736
BLAST of mRNA_Ecto-sp13_S_contig20382.6727.1 vs. uniprot
Match: D7FZY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY3_ECTSI) HSP 1 Score: 162 bits (409), Expect = 2.400e-45 Identity = 79/117 (67.52%), Postives = 91/117 (77.78%), Query Frame = 1
Query: 19 AVLEASMLNSNCQALYTQNISNGLRDEQLMMLANVLRRGNIWCLNTGENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIPIGLKKVMRTAIRDNKVKHTRHKSASNVKLIRRCTKVW 369
AVLEA M+N NCQALY QN + G RDEQ+ LA VL RGNIWCLN GEN K+K +TW FV+ I+ T VTHAYLSE I LKK MR AIRDN+VKHTRHKSASN+++IRRCT +W
Sbjct: 336 AVLEALMVNDNCQALYIQNFNEGFRDEQVEALAKVLGRGNIWCLNAGENYKVKLATWWQFVEAIKNTNVTHAYLSEHVITAELKKAMRKAIRDNRVKHTRHKSASNLEVIRRCTNMW 452
BLAST of mRNA_Ecto-sp13_S_contig20382.6727.1 vs. uniprot
Match: A0A6H5KIP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIP7_9PHAE) HSP 1 Score: 163 bits (412), Expect = 3.570e-44 Identity = 79/117 (67.52%), Postives = 92/117 (78.63%), Query Frame = 1
Query: 19 AVLEASMLNSNCQALYTQNISNGLRDEQLMMLANVLRRGNIWCLNTGENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIPIGLKKVMRTAIRDNKVKHTRHKSASNVKLIRRCTKVW 369
AVLEA M+N NCQALY QN + G RDEQ+ LA VLRRGNIWCLN GEN K+K +TW FV+ I+ T VTHAYLSE I LKK MR AIRDN+VKHTRHKSA+N+++IRRCT +W
Sbjct: 708 AVLEALMVNDNCQALYIQNFNEGFRDEQVGALAKVLRRGNIWCLNAGENYKVKLATWWQFVEAIKNTNVTHAYLSEHVITAELKKAMRKAIRDNRVKHTRHKSAANLEVIRRCTNMW 824
BLAST of mRNA_Ecto-sp13_S_contig20382.6727.1 vs. uniprot
Match: A0A7S2G2D6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2D6_9STRA) HSP 1 Score: 123 bits (308), Expect = 8.670e-31 Identity = 58/117 (49.57%), Postives = 75/117 (64.10%), Query Frame = 1
Query: 19 AVLEASMLNSNCQALYTQNISNGLRDEQLMMLANVLRRGNIWCLNTGENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIPIGLKKVMRTAIRDNKVKHTRHKSASNVKLIRRCTKVW 369
++L+A M+NSNCQALY QN ++G+ D QL L+ VL+ G IWCLN GEN +I P W F + T VTH Y SE I + K MR IR N+ KH+RH S N+ +I+RCT W
Sbjct: 97 SILDALMVNSNCQALYIQNFNDGMLDVQLQKLSKVLQLGRIWCLNIGENYRITPGAWNQFADSLLATNVTHMYASEHVISVEQKTRMRDIIRANRAKHSRHNSIDNIAVIKRCTNCW 213
BLAST of mRNA_Ecto-sp13_S_contig20382.6727.1 vs. uniprot
Match: A0A1Z5JIQ5_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIQ5_FISSO) HSP 1 Score: 115 bits (287), Expect = 2.720e-27 Identity = 60/125 (48.00%), Postives = 77/125 (61.60%), Query Frame = 1
Query: 1 PYTVKHAVLEASMLNSNCQALYTQNISNGLRDEQLMMLANVLRRG--NIWCLNTGENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIPIGLKKVMRTAIRDNKVKHTRHKSASNVKLIRRCTKVW 369
P V AVL A N+NC+ALY QN + G+RDEQ+M L VL+R NIWCLN GE K+K TW F ++KT +TH Y SE I LK +R+ IRDN+ KH+ H +N+ I +CT W
Sbjct: 715 PCLVIDAVLAALEENTNCEALYIQNFNEGMRDEQMMSLLQVLQRSSCNIWCLNIGETYKVKQKTWKRFAIGLKKTKITHMYASEHVISTELKDQIRSTIRDNRSKHSMHCDPNNLDTIVKCTHCW 839
BLAST of mRNA_Ecto-sp13_S_contig20382.6727.1 vs. uniprot
Match: A0A1Z5JS48_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JS48_FISSO) HSP 1 Score: 114 bits (286), Expect = 3.480e-27 Identity = 60/125 (48.00%), Postives = 77/125 (61.60%), Query Frame = 1
Query: 1 PYTVKHAVLEASMLNSNCQALYTQNISNGLRDEQLMMLANVLRRGN--IWCLNTGENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIPIGLKKVMRTAIRDNKVKHTRHKSASNVKLIRRCTKVW 369
P V AVL A N+NC+ALY QN + G+RDEQ+M L VL+R + IWCLN GE K+K TW F ++KT +TH Y SE I LK +R+ IRDN+ KH+ H SN+ I +CT W
Sbjct: 518 PCLVIDAVLAALEENTNCEALYIQNFNEGMRDEQMMSLLQVLQRSSCKIWCLNIGETYKVKQKTWKKFAIGLKKTKITHMYASEHVISTELKDQIRSTIRDNRSKHSMHCDPSNLDTIIKCTHCW 642 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20382.6727.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20382.6727.1 >prot_Ecto-sp13_S_contig20382.6727.1 ID=prot_Ecto-sp13_S_contig20382.6727.1|Name=mRNA_Ecto-sp13_S_contig20382.6727.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=124bp PYTVKHAVLEASMLNSNCQALYTQNISNGLRDEQLMMLANVLRRGNIWCLback to top mRNA from alignment at Ecto-sp13_S_contig20382:343..846+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20382.6727.1 ID=mRNA_Ecto-sp13_S_contig20382.6727.1|Name=mRNA_Ecto-sp13_S_contig20382.6727.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=504bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20382:343..846+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20382:343..846+ >mRNA_Ecto-sp13_S_contig20382.6727.1 ID=mRNA_Ecto-sp13_S_contig20382.6727.1|Name=mRNA_Ecto-sp13_S_contig20382.6727.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=372bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20382:343..846+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |