mRNA_Ecto-sp13_S_contig20377.6723.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20377.6723.1 vs. uniprot
Match: A0A6H5KDV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV2_9PHAE) HSP 1 Score: 422 bits (1084), Expect = 1.750e-144 Identity = 215/223 (96.41%), Postives = 216/223 (96.86%), Query Frame = 1
Query: 1 STVEGYVNVLPVQGSFETLIHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLSAGLLAASGAAYAFTEQPVWVLVAALALLPLTLPELGSLQAAVSGKPDAKAVSSDYVLVPFVDSMNHVTSANTELSFSPVSGDLGVSVNRDYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVL 669
S VEGYVNVLPVQGSFETLIHWTDQELD LKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLSAGL AASGAAYA TEQPVWVLVAALALLPLTLPELGSLQAAVSGKPDAKA +SDYVLVPFVDSMNHVTSA TELSFSPVSGDLGVSVNR YREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVL
Sbjct: 178 SAVEGYVNVLPVQGSFETLIHWTDQELDTLKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLSAGLFAASGAAYAVTEQPVWVLVAALALLPLTLPELGSLQAAVSGKPDAKAAASDYVLVPFVDSMNHVTSAKTELSFSPVSGDLGVSVNRGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVL 400
BLAST of mRNA_Ecto-sp13_S_contig20377.6723.1 vs. uniprot
Match: D7G8L0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L0_ECTSI) HSP 1 Score: 187 bits (475), Expect = 3.750e-55 Identity = 91/97 (93.81%), Postives = 92/97 (94.85%), Query Frame = 1
Query: 1 STVEGYVNVLPVQGSFETLIHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLSA 291
S VEGYVNVLP QGSFETLIHWTDQELDAL+YSRCAASAKRQRAAWDKLHEDLV RCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSA L A
Sbjct: 178 SAVEGYVNVLPAQGSFETLIHWTDQELDALEYSRCAASAKRQRAAWDKLHEDLVVRCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAPLMA 274
BLAST of mRNA_Ecto-sp13_S_contig20377.6723.1 vs. uniprot
Match: A0A7S3XNH5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNH5_HETAK) HSP 1 Score: 175 bits (443), Expect = 5.780e-47 Identity = 104/225 (46.22%), Postives = 138/225 (61.33%), Query Frame = 1
Query: 1 STVEGYVNVLPVQGSFETLIHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLS---AGLLAASGAAYAFTEQPVWVLVAALAL-LPLTLPELGSLQAAVSGKPDAKAVSSDYVLVPFVDSMNHVTSANTELSFSPVSGDLGVSVNRDYREGEQAYISYGLKSNDELLQFYGFVEADCPADTY 663
S V+ YV++LP + +TL +WTD+ELD L+Y S RQR WD+LH+ LV+ P GA A ++L WAL CVLSRAF G G Q A L+ A LLA +G Y + P W L AA AL LP TL E + D + S+ VL+P +DS+NH T+ T+L F+P++ G+SV + + GEQ +ISYGLK+NDELLQF+GFVE PAD +
Sbjct: 158 SAVQAYVDLLPDPENLDTLYYWTDEELDLLRYPVLKNSVLRQRKEWDELHKQLVSSSPGGAEGAPAPEELAWALGCVLSRAFAGARTGLQNRATLAVQLAALLAGAGL-YVAQDSP-WGLAAAAALALPGTLQEARTAM-------DPELQKSELVLLPMIDSINHQTTVETDLGFNPLTESFGISVKQSFETGEQVFISYGLKTNDELLQFFGFVEKQNPADVW 373
BLAST of mRNA_Ecto-sp13_S_contig20377.6723.1 vs. uniprot
Match: A0A7S3XME2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XME2_HETAK) HSP 1 Score: 175 bits (443), Expect = 6.210e-47 Identity = 104/225 (46.22%), Postives = 138/225 (61.33%), Query Frame = 1
Query: 1 STVEGYVNVLPVQGSFETLIHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLS---AGLLAASGAAYAFTEQPVWVLVAALAL-LPLTLPELGSLQAAVSGKPDAKAVSSDYVLVPFVDSMNHVTSANTELSFSPVSGDLGVSVNRDYREGEQAYISYGLKSNDELLQFYGFVEADCPADTY 663
S V+ YV++LP + +TL +WTD+ELD L+Y S RQR WD+LH+ LV+ P GA A ++L WAL CVLSRAF G G Q A L+ A LLA +G Y + P W L AA AL LP TL E + D + S+ VL+P +DS+NH T+ T+L F+P++ G+SV + + GEQ +ISYGLK+NDELLQF+GFVE PAD +
Sbjct: 158 SAVQAYVDLLPDPENLDTLYYWTDEELDLLRYPVLKNSVLRQRKEWDELHKQLVSSSPGGAEGAPAPEELAWALGCVLSRAFAGARTGLQNRATLAVQLAALLAGAGL-YVAQDSP-WGLAAAAALALPGTLQEARTAM-------DPELQKSELVLLPMIDSINHQTTVETDLGFNPLTESFGISVKQSFETGEQVFISYGLKTNDELLQFFGFVEKQNPADVW 373
BLAST of mRNA_Ecto-sp13_S_contig20377.6723.1 vs. uniprot
Match: A0A4D9DEN8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEN8_9STRA) HSP 1 Score: 122 bits (305), Expect = 5.480e-29 Identity = 82/223 (36.77%), Postives = 117/223 (52.47%), Query Frame = 1
Query: 13 GYVNVLPVQGSFETLIHWTDQELDALK--YSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRD----DLVWALECVLSRAFNGRFGGGQKSAVLSAGLLAASGAAYAFTEQPVWVLVAALALLPLTLPELGSLQAAVSGKPDAKAVSSDYVLVPFVDSMNHVTSANTELSFSPVSGDLGVSVNRDYREGEQAYISYGLKSNDELLQFYGFVEADCPADTY 663
GYV +LP T +HW +++L+AL+ Y A RQR W L++ L G RAV D VWA+E VLSRAF G FG G S S L+A Y ++ + +L AL P G+L S ++ ++ YVL P +DS+NH ++ T+L + V +S+ D++ G+Q ++SYG KSND+LL YGFVE D AD +
Sbjct: 25 GYVQLLPPPEGIPTPLHWPEEDLNALRGVYPVLAGKVDRQRQLWAGLYDAL------GKTRAVREDMDETTFVWAMESVLSRAFKGTFGTGFNSLAPSLLLVALFAGIYYLDQETIQLLSYALEEYPYLAAIPGALVLLPSLLEFFRSKAT-YVLAPMIDSLNHRSTVPTDLDYDSVRQRFRLSLGEDFKAGQQVFMSYGDKSNDDLLFHYGFVEVDAAADVF 240
BLAST of mRNA_Ecto-sp13_S_contig20377.6723.1 vs. uniprot
Match: A0A5J4XRG8_9CHLO (N-methyltransferase (ISS) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XRG8_9CHLO) HSP 1 Score: 120 bits (300), Expect = 5.770e-29 Identity = 80/238 (33.61%), Postives = 125/238 (52.52%), Query Frame = 1
Query: 1 STVEGYVNVLPVQGSFETLIHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLSAGLLAASGAAYAFT----EQPVWVLVAALALLPLTLPELGSLQAAVSGKPDAKAVSSDY-----------VLVPFVDSMNHVTSANTELSFSPVSGDLGVSVNRDYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVL 669
S V GY+ LP + F+TL HW+ +EL L Y ++Q+ W ++++ A + V D+LVWALECV SRAF+G + G ++ L+A A Y ++ ++ VL LA L T L+ ++G A + Y + P +DSMNH +++ E+++ V+ R Y++GEQ +I+YG +SND+LLQ+YGFVE+ PAD YV+
Sbjct: 64 SAVSGYIEQLPAR--FDTLFHWSPEELQLLMYPPLIQQVQQQKQYWHDHYKNVKAASSDNP---VGEDELVWALECVRSRAFSGPYSGESQTTGLTAQTPVI--ARYCWSPPVKDRAKLVLPFVLAALAYTQVAHLPLEQILNGAIAAVLFNIIYDTLLSRKLRWFAMCPVIDSMNHQSTSTNEVAYEYFGDRFSVTAERKYKQGEQVFITYGQQSNDKLLQYYGFVESKNPADVYVV 294
BLAST of mRNA_Ecto-sp13_S_contig20377.6723.1 vs. uniprot
Match: W7TX23_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TX23_9STRA) HSP 1 Score: 121 bits (303), Expect = 3.670e-28 Identity = 84/229 (36.68%), Postives = 117/229 (51.09%), Query Frame = 1
Query: 13 GYVNVLPVQGSFETLIHWTDQELDALK--YSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRD----DLVWALECVLSRAFNGRFGGGQKSAVLSAGLLAASGAAYAFTEQPVWVLVAAL------ALLPLTLPELGSLQAAVSGKPDAKAVSSDYVLVPFVDSMNHVTSANTELSFSPVSGDLGVSVNRDYREGEQAYISYGLKSNDELLQFYGFVEADCPADTY 663
GY +LP T +HW +++L+AL+ Y A RQR W L++ L G RAV D VWA+E VLSRAF G FG G S S L+A Y ++ + +L AL A++P L L SL K + YVL P +DS+NH ++ T+L + V +S+ D++ G+Q ++SYG KSND+LL YGFVE D AD +
Sbjct: 173 GYTQLLPPPEGIPTPLHWPEEDLNALRGVYPVLAGKVDRQRQLWAGLYDAL------GKTRAVREDMDETTFVWAMESVLSRAFKGTFGTGFNSLAPSLLLVALFAGIYYLDQETIQLLSYALEEYPYLAVIPGALVLLPSLLEFFRSK-------ATYVLAPMIDSLNHRSTVPTDLDYDSVRQRFRLSLGEDFKAGQQVFMSYGDKSNDDLLFHYGFVEVDAAADVF 388
BLAST of mRNA_Ecto-sp13_S_contig20377.6723.1 vs. uniprot
Match: A0A7S3WKM2_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WKM2_EMIHU) HSP 1 Score: 115 bits (287), Expect = 1.490e-26 Identity = 89/233 (38.20%), Postives = 122/233 (52.36%), Query Frame = 1
Query: 1 STVEGYVNVLPVQGSFET-LIHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLSA-GLLAA---------SGAAYAFTEQPVWVLVAALALLPLTLPELGSLQAAVSGKPDAKAVSSDYVLVPFVDSMNHVTSANTELSFSPVSGDLGVSVNRDYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYV 666
S + GY++ LP SFE L+ WTD EL L+Y AA+ + QR + +L E L A AG +VT ++L WA + VLSRAF G++ A A G AA SG A+ + +VA +P LP L L+ A+ G+P S L+P +DS NH + A SF P + ++ R GE+AYISYG K ND LLQ +GFVEA P D+++
Sbjct: 147 SEICGYIDYLPSPASFEDGLLDWTDAELAELRYPPLAAAVREQRDSIRRLLEALRAGGGADAG-SVTLEELSWAQQLVLSRAFASDINKGERGATSGAMGSRAAPLPXXXXXKSGFQKAWERSELSTVVATR--MP-KLPSLDDLKGAIGGEP-VNDPSFAMALMPMLDSFNHKSGAVNGCSFDPEANAFVLTAGAPLRRGEEAYISYGDKGNDALLQLFGFVEASNPHDSFL 374
BLAST of mRNA_Ecto-sp13_S_contig20377.6723.1 vs. uniprot
Match: A0A7S3EP57_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EP57_9RHOD) HSP 1 Score: 111 bits (278), Expect = 4.240e-25 Identity = 84/230 (36.52%), Postives = 121/230 (52.61%), Query Frame = 1
Query: 7 VEGYVNVLPVQGSFETLIHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGR-----FGGGQKSAVLSAGL-LAASGAAYAFTEQPVWVL-VAALALLPLTL--PELGSLQAAVSGKPDAKAVSSDYVLVPFVDSMNHVTSANTELSFSPVSGDLGVSVNRDYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVL 669
+ GYVN LP +F T HWT +EL +Y Q+ W +LH L + R+V D+ VWALECV SRAF+G FG K+ + L +AA A +EQ + L +A +ALL L P + Q A+ G+ + Y+L P +D NH + A +++S+ + Y++GEQ +ISYG +SND+LLQ+YGFVE + P D YV+
Sbjct: 125 LSGYVNALPK--TFSTPFHWTAEELQETQYIPIQKQVVNQQQEWKRLHRLLTENLKDE--RSVEFDEFVWALECVRSRAFSGEAEATPFGERLKTIAFAGALSVAALTLHLADSEQVLNGLSLAVIALLSYDLIYPRV---QKAIGGEEWKR-----YILCPIIDFCNHSSRAESDISYEYFFSSFVLKTG-PYKKGEQVFISYGDRSNDQLLQYYGFVEENNPHDVYVV 341
BLAST of mRNA_Ecto-sp13_S_contig20377.6723.1 vs. uniprot
Match: A0A8J4F2B9_9CHLO (SET domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F2B9_9CHLO) HSP 1 Score: 111 bits (278), Expect = 6.980e-25 Identity = 64/207 (30.92%), Postives = 111/207 (53.62%), Query Frame = 1
Query: 58 IHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQ-KSAVLSAGLLA--ASGAAYAFTEQPVWVLVAALALLPLTLPELGSLQAAVSGKPDAKAVSSDYVLVPFVDSMNHVTSANTELSFSPVSGDLGVSVNRDYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVL 669
+ W+++++ AL+Y Q+ W +L++DLV++ + + TR+D +WA+ CV SR F+G + G + + + GL+A A G P L AA+A+L + L ++ Y + P +D NH ++ +E+S++ V +R++ +GEQ +ISYG +SND L+Q+YGF EA+ P D YV+
Sbjct: 173 VRWSERQIAALQYPHLIRQVTEQQREWQQLYDDLVSKGTPSSAQPPTREDFIWAMSCVRSRTFSGPYVGSTLQDRLRTGGLVAVLALGNTVLGLADPQKTLSAAIAVLLFNVLYEVILSRSLK----------QYAICPLIDFFNHSSAVQSEVSYNYFGDSYSVVASREFTKGEQVFISYGPQSNDSLMQYYGFAEANNPQDVYVM 369 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20377.6723.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20377.6723.1 >prot_Ecto-sp13_S_contig20377.6723.1 ID=prot_Ecto-sp13_S_contig20377.6723.1|Name=mRNA_Ecto-sp13_S_contig20377.6723.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=223bp STVEGYVNVLPVQGSFETLIHWTDQELDALKYSRCAASAKRQRAAWDKLHback to top mRNA from alignment at Ecto-sp13_S_contig20377:3..2762+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20377.6723.1 ID=mRNA_Ecto-sp13_S_contig20377.6723.1|Name=mRNA_Ecto-sp13_S_contig20377.6723.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2760bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20377:3..2762+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20377:3..2762+ >mRNA_Ecto-sp13_S_contig20377.6723.1 ID=mRNA_Ecto-sp13_S_contig20377.6723.1|Name=mRNA_Ecto-sp13_S_contig20377.6723.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=669bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20377:3..2762+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |