mRNA_Ecto-sp13_S_contig20354.6710.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20354.6710.1 vs. uniprot
Match: D7FSZ0_ECTSI (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSZ0_ECTSI) HSP 1 Score: 127 bits (318), Expect = 4.590e-34 Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 1
Query: 1 SSIDTSMSGTTLVSVCVRGTKLILTNVGDSRATLGRRRLRSEGGSANDGGGPLVAQALTEDHKPDIPAE 207
SSIDTSMSGTTLVSVCVRGTKLILTNVGDSRATLGRRRLR EGGSANDGGG LVAQALTEDHKPDIPAE
Sbjct: 95 SSIDTSMSGTTLVSVCVRGTKLILTNVGDSRATLGRRRLRGEGGSANDGGGSLVAQALTEDHKPDIPAE 163
BLAST of mRNA_Ecto-sp13_S_contig20354.6710.1 vs. uniprot
Match: A0A7S3F1S8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F1S8_9EUKA) HSP 1 Score: 50.8 bits (120), Expect = 1.160e-5 Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 1 SSIDTSMSGTTLVSVCVRGTKLILTNVGDSRATLGRRRLRSEGGSANDGGGPLVAQALTEDHKPDIPAE 207
S ID S+SG+T + RG +L++ NVGDSRA LGR + G L+A+ L+EDHKPD E
Sbjct: 126 SGIDVSLSGSTACTALKRGRRLLVANVGDSRAVLGR---------LDPATGRLLARDLSEDHKPDCAKE 185
BLAST of mRNA_Ecto-sp13_S_contig20354.6710.1 vs. uniprot
Match: A0A813G8I3_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G8I3_POLGL) HSP 1 Score: 50.4 bits (119), Expect = 1.630e-5 Identity = 31/62 (50.00%), Postives = 38/62 (61.29%), Query Frame = 1
Query: 10 DTSMSGTTLVSVCVRGTKLILTNVGDSRATLGRRRLRSEGGSANDGGGPLVAQALTEDHKPD 195
D ++SGTT + L + +VGDSRA L RR S+GG GGG LVA+ LT DHKPD
Sbjct: 181 DCTLSGTTATLALLHDKLLYVAHVGDSRAVLARRTPSSQGGL---GGGALVAEDLTIDHKPD 239
BLAST of mRNA_Ecto-sp13_S_contig20354.6710.1 vs. uniprot
Match: A0A1R2AXU6_9CILI (PPM-type phosphatase domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AXU6_9CILI) HSP 1 Score: 50.4 bits (119), Expect = 1.640e-5 Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 10 DTSMSGTTLVSVCVRGTKLILTNVGDSRATLGRRRLRSEGGSANDGGGPLVAQALTEDHKPDIPAE 207
D+S+SGTT ++V +RG + I +NVGDSRA +GR DG A AL++DHKP++P E
Sbjct: 227 DSSLSGTTAITVLIRGKQCICSNVGDSRAVIGRYD--------KDG---WKAIALSQDHKPNVPVE 281
BLAST of mRNA_Ecto-sp13_S_contig20354.6710.1 vs. uniprot
Match: A0A7S2RKW3_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RKW3_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 1.660e-5 Identity = 32/72 (44.44%), Postives = 41/72 (56.94%), Query Frame = 1
Query: 7 IDTSMSGTTLVSVCVRGTKLILTNVGDSRATLG-----RRRLRSEGGSANDGGGPLVAQALTEDHKPDIPAE 207
IDT++SGTT V +RGTKL + NVGDSR G + +LR +VA L+EDHKPD+ E
Sbjct: 400 IDTTLSGTTAVVTILRGTKLFVANVGDSRIAKGVIKQIKNQLRPR----------IVAHDLSEDHKPDLEKE 461
BLAST of mRNA_Ecto-sp13_S_contig20354.6710.1 vs. uniprot
Match: A0A5A8DHT3_CAFRO (PPM-type phosphatase domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DHT3_CAFRO) HSP 1 Score: 50.1 bits (118), Expect = 2.210e-5 Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 1 SSIDTSMSGTTLVSVCVRGTKLILTNVGDSRATLGRRRLRSEGGSANDGGGPLVAQALTEDHKPDIPAE 207
S ID +SGTT ++ +RG KL + NVGDSRA LGR+ +DG + A L+ DHKPD P E
Sbjct: 161 SDIDVYVSGTTGITTLIRGPKLYVANVGDSRAVLGRQ--------FHDGS--IAAVDLSRDHKPDDPEE 219
BLAST of mRNA_Ecto-sp13_S_contig20354.6710.1 vs. uniprot
Match: W9S2V3_9ROSA (PPM-type phosphatase domain-containing protein n=1 Tax=Morus notabilis TaxID=981085 RepID=W9S2V3_9ROSA) HSP 1 Score: 49.7 bits (117), Expect = 3.050e-5 Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 1
Query: 1 SSIDTSMSGTTLVSVCVRGTKLILTNVGDSRATLGRRRLRSEGGSANDGGGPLVAQALTEDHKPDIPAE 207
S IDT SGTT +++ +G +L++ NVGDSRA L + GG L+A LT D KPD+P E
Sbjct: 166 SEIDTFRSGTTALTIVKQGERLVVANVGDSRAVL----------ATTSDGGTLLALQLTIDFKPDLPQE 224
BLAST of mRNA_Ecto-sp13_S_contig20354.6710.1 vs. uniprot
Match: A0A7S2UGJ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGJ7_9STRA) HSP 1 Score: 49.7 bits (117), Expect = 3.060e-5 Identity = 28/67 (41.79%), Postives = 37/67 (55.22%), Query Frame = 1
Query: 7 IDTSMSGTTLVSVCVRGTKLILTNVGDSRATLGRRRLRSEGGSANDGGGPLVAQALTEDHKPDIPAE 207
IDT SGTTL +RG + N+GDSR +G+ + G +VA+ LT+DHKPD P E
Sbjct: 198 IDTEFSGTTLSMAIIRGNTITGVNIGDSRVIIGK-----------EVDGKMVAEELTQDHKPDTPKE 253
BLAST of mRNA_Ecto-sp13_S_contig20354.6710.1 vs. uniprot
Match: F0XW26_AURAN (PPM-type phosphatase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW26_AURAN) HSP 1 Score: 49.3 bits (116), Expect = 3.090e-5 Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 7 IDTSMSGTTLVSVCVRGTKLILTNVGDSRATLGRRRLRSEGGSANDGGGPLVAQALTEDHKPDIPAE 207
+DT SG+T V +RG L+++NVGDSR TLG + G +VA+ ++ DHKPD PAE
Sbjct: 58 VDTEFSGSTYVFAALRGGALLVSNVGDSRVTLGV-----------EVDGAIVARPVSIDHKPDAPAE 113
BLAST of mRNA_Ecto-sp13_S_contig20354.6710.1 vs. uniprot
Match: A0A1R2BZE2_9CILI (PPM-type phosphatase domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BZE2_9CILI) HSP 1 Score: 49.3 bits (116), Expect = 4.200e-5 Identity = 30/61 (49.18%), Postives = 37/61 (60.66%), Query Frame = 1
Query: 10 DTSMSGTTLVSVCVRGTKLILTNVGDSRATLGRRRLRSEGGSANDGGGPLVAQALTEDHKP 192
DT+ SG+T VS+ +RG KL NVGDSRA LGR+ G N +A AL+ DHKP
Sbjct: 216 DTNFSGSTFVSIIIRGKKLWCANVGDSRALLGRQLTDKTGTKGNCN--HWMAIALSRDHKP 274 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20354.6710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20354.6710.1 >prot_Ecto-sp13_S_contig20354.6710.1 ID=prot_Ecto-sp13_S_contig20354.6710.1|Name=mRNA_Ecto-sp13_S_contig20354.6710.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=63bp MSGTTLVSVCVRGTKLILTNVGDSRATLGRRRLRSEGGSANDGGGPLVAQback to top mRNA from alignment at Ecto-sp13_S_contig20354:2435..2641+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20354.6710.1 ID=mRNA_Ecto-sp13_S_contig20354.6710.1|Name=mRNA_Ecto-sp13_S_contig20354.6710.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=207bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20354:2435..2641+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20354:2435..2641+ >mRNA_Ecto-sp13_S_contig20354.6710.1 ID=mRNA_Ecto-sp13_S_contig20354.6710.1|Name=mRNA_Ecto-sp13_S_contig20354.6710.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=189bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20354:2435..2641+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |