mRNA_Ecto-sp13_S_contig2033.6701.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig2033.6701.1 vs. uniprot
Match: A0A6H5KH14_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KH14_9PHAE) HSP 1 Score: 349 bits (895), Expect = 9.710e-113 Identity = 179/191 (93.72%), Postives = 179/191 (93.72%), Query Frame = 1
Query: 1 DVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDWYDKRVGAAPKINNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVSR 573
DVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRD NNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVSR
Sbjct: 76 DVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRD-----------CNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVSR 255
BLAST of mRNA_Ecto-sp13_S_contig2033.6701.1 vs. uniprot
Match: F0Y5E8_AURAN (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5E8_AURAN) HSP 1 Score: 266 bits (679), Expect = 8.590e-83 Identity = 131/191 (68.59%), Postives = 157/191 (82.20%), Query Frame = 1
Query: 1 DVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDWYDKRVGAAPKINNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVSR 573
DVSRLFTEM+++IETRDLVVKKMVY YLCTYA +KP++ +MCINTLQRD +N DPMVRGLALRSLCSLRLP ++EYI PL+ASL+DA+SYVRKTGVM ILK++H+ P++V G +VD LY+ML+D D VVANC+VVLNEIM D GG+A NTAIVHHLLGRL DFNEWG+C +L LV+R
Sbjct: 65 DVSRLFTEMVMSIETRDLVVKKMVYHYLCTYAHEKPEMGLMCINTLQRD-----------CSNDDPMVRGLALRSLCSLRLPTVLEYIQGPLRASLSDAHSYVRKTGVMGILKVYHMDPESVRGGDLVDVLYDMLRDGDGTVVANCIVVLNEIMLDEGGIAINTAIVHHLLGRLNDFNEWGLCSVLKLVAR 244
BLAST of mRNA_Ecto-sp13_S_contig2033.6701.1 vs. uniprot
Match: A0A835YU68_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU68_9STRA) HSP 1 Score: 249 bits (636), Expect = 1.730e-74 Identity = 129/191 (67.54%), Postives = 150/191 (78.53%), Query Frame = 1
Query: 1 DVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDWYDKRVGAAPKINNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVSR 573
DVSRLFTEM++AIETRDLVVKKMVYLYLCTYA PDLAIMC+NTLQRD N+DPMVRGLALRSLCSLRLP++VEYIS+PL+ SLTDAN+YVRKTGVM ILK+ HL P V +G MVDTLY ML D DAQVV NC++ L+E+ A GGM+ + V LLGRL+ F+EWG+C +LALV R
Sbjct: 89 DVSRLFTEMIMAIETRDLVVKKMVYLYLCTYAHTNPDLAIMCVNTLQRD-----------CGNEDPMVRGLALRSLCSLRLPSIVEYISEPLRRSLTDANAYVRKTGVMGILKLHHLAPAVVREGNMVDTLYAMLHDVDAQVVTNCLLALDEMAAAQGGMSLSRDTVLLLLGRLDGFSEWGLCKVLALVRR 268
BLAST of mRNA_Ecto-sp13_S_contig2033.6701.1 vs. uniprot
Match: A0A7S2SSW9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSW9_9STRA) HSP 1 Score: 246 bits (627), Expect = 1.730e-73 Identity = 120/191 (62.83%), Postives = 150/191 (78.53%), Query Frame = 1
Query: 1 DVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDWYDKRVGAAPKINNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVSR 573
DVSRLF+EM++ +ET+DLVVKKMVYLYL YA++ PD+A+MCINTL RD NN DPMVRGLALRSLCSLRLP++VEYI+DP++ SL D N+YVR+TGVM ILK++HL P V+ ++D +Y+MLQD D VVANC++VLNE+M + GGMA N AIVHHLL RL DFNEWG+ +L LV+R
Sbjct: 62 DVSRLFSEMVMCVETKDLVVKKMVYLYLVNYAQEHPDMALMCINTLHRD-----------CNNDDPMVRGLALRSLCSLRLPSIVEYIADPIRKSLVDKNAYVRRTGVMGILKLFHLQPDMVKQSNLIDLIYDMLQDPDGGVVANCIMVLNEMMLEEGGMAVNQAIVHHLLERLNDFNEWGLHQVLELVTR 241
BLAST of mRNA_Ecto-sp13_S_contig2033.6701.1 vs. uniprot
Match: K3WB21_GLOUD (AP complex subunit beta n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB21_GLOUD) HSP 1 Score: 243 bits (621), Expect = 2.140e-72 Identity = 118/191 (61.78%), Postives = 152/191 (79.58%), Query Frame = 1
Query: 1 DVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDWYDKRVGAAPKINNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVSR 573
DVSRLF+EM+L ++T+DL+ KKMVYLYL YA + +LAIMCINTL DWYD + + N+DPMVRGLALRSLCSLRL +++EYI DPL+ SLTD ++YVRKTGV+ ILK++ L P+ +++ M+DTLYNM++D D QVV+NC+V LNEIMAD GG+A N IV HLL R+ DFNEWG C+IL +V+R
Sbjct: 82 DVSRLFSEMVLCVDTKDLISKKMVYLYLTNYANKNSELAIMCINTLLNDWYDLTIFCVNR--NEDPMVRGLALRSLCSLRLDSILEYIHDPLQQSLTDTSAYVRKTGVIGILKVYSLNPELIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIMADEGGIAINQQIVMHLLSRISDFNEWGQCNILQIVAR 270
BLAST of mRNA_Ecto-sp13_S_contig2033.6701.1 vs. uniprot
Match: A0A6A5A8F1_9STRA (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A8F1_9STRA) HSP 1 Score: 228 bits (581), Expect = 7.270e-72 Identity = 112/190 (58.95%), Postives = 146/190 (76.84%), Query Frame = 1
Query: 1 DVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDWYDKRVGAAPKINNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVS 570
DVSR+F+E+++ ++T+D++ KKMVY YL YA + DLAI+CINTL DWY V N+DP+VRGLALRSLCSLRL M+EYI +PL+ SLTD ++YVRKTGV+ ILK++ L + ++D MVDTLYNM++D D QVV+NC+V LNEIMAD GG+A N IV HLL R+ +FNEWG C+IL +VS
Sbjct: 59 DVSRIFSEIVMCVDTKDIITKKMVYYYLTNYANKNADLAILCINTLLTDWY---VLVLDPTRNEDPLVRGLALRSLCSLRLETMLEYIHEPLQHSLTDTSAYVRKTGVIGILKVFSLNKELIKDSEMVDTLYNMIRDRDPQVVSNCLVALNEIMADEGGIAVNQQIVLHLLTRISEFNEWGQCNILHVVS 245
BLAST of mRNA_Ecto-sp13_S_contig2033.6701.1 vs. uniprot
Match: A0A4D9CWN1_9STRA (B2-adapt-app_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWN1_9STRA) HSP 1 Score: 238 bits (607), Expect = 2.280e-70 Identity = 122/192 (63.54%), Postives = 146/192 (76.04%), Query Frame = 1
Query: 1 DVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDWYDKRVGAAPKINNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDSDAQVVANCVVVLNEIMA-DAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVSR 573
DVSRLFTEM+LAIETRDLVVKKMVYLYLC YA KPDLA+MC+NTLQRD + DPMVRGLALR+LCSLRLP+M+EYIS PL+ +LTD + YVRKTGVM ILK++HL P VD LYNM+QD D VV NC++VL E++A + GGMA N ++ HLLGRL +FNEWG+ ILALV++
Sbjct: 72 DVSRLFTEMVLAIETRDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRD-----------CSADDPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAK 252
BLAST of mRNA_Ecto-sp13_S_contig2033.6701.1 vs. uniprot
Match: A0A7S1C8U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8U9_9STRA) HSP 1 Score: 233 bits (593), Expect = 9.760e-70 Identity = 114/191 (59.69%), Postives = 148/191 (77.49%), Query Frame = 1
Query: 1 DVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDWYDKRVGAAPKINNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVSR 573
DVSRLF+EM+LA T+DLV+KKMVYLYLC YA+ +L ++ INTLQ+D D DPM+RGLALRSLCSLRL +++EY+ PLK+SLTD+++YVRKTG+M ILK++HL P V++ +VDT+YNM++D D VV NC+V LNEIMAD GG+A N AI+HHLL R++DFNEWG C +L LV+R
Sbjct: 53 DVSRLFSEMVLASNTKDLVLKKMVYLYLCNYAQTNAELTLLVINTLQKDCRD-----------DDPMIRGLALRSLCSLRLTSVIEYVMVPLKSSLTDSSAYVRKTGIMGILKVYHLAPARVKESDLVDTMYNMVRDRDTVVVTNCLVALNEIMADEGGIAINQAIIHHLLTRIKDFNEWGQCVVLGLVAR 232
BLAST of mRNA_Ecto-sp13_S_contig2033.6701.1 vs. uniprot
Match: M4C296_HYAAE (AP complex subunit beta n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C296_HYAAE) HSP 1 Score: 236 bits (601), Expect = 1.460e-69 Identity = 118/197 (59.90%), Postives = 152/197 (77.16%), Query Frame = 1
Query: 1 DVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDWYDKRVGAAPKINNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVSRLVWSWP 591
DVSRLF+EM+L ++T+DL+ KKMVYLYL YA++ +LAIMCINTL D N+DPMVRGLALRSLCSLRL +++EYI DPL+ASLTD ++YVRKTGV+ ILK++ L P+ +++ M+DTLYNM++D D QVV+NC+V LNEIMAD GG+A N IV HLLGR+ DFNEWG C+IL +V++ S P
Sbjct: 80 DVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLND-----------CRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPELIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIMADEGGIAINQPIVMHLLGRITDFNEWGQCNILQIVAKYKASGP 265
BLAST of mRNA_Ecto-sp13_S_contig2033.6701.1 vs. uniprot
Match: A0A484E443_BRELC (AP complex subunit beta n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E443_BRELC) HSP 1 Score: 233 bits (593), Expect = 2.080e-68 Identity = 115/191 (60.21%), Postives = 149/191 (78.01%), Query Frame = 1
Query: 1 DVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDWYDKRVGAAPKINNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVSR 573
DVSRLF+EM+L ++T+DL+ KKMVYLYL YA++ +LAIMCINTL D N+DPMVRGLALRSLCSLRL +++EYI DPL+ASLTD ++YVRKTGV+ ILK++ L P+ +++ M+DTLYNM++D D QVV+NC+V LNEIMAD GG+A N IV HLL R+ DFNEWG C+IL +V++
Sbjct: 79 DVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLND-----------CRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIMADEGGIAINQPIVMHLLSRISDFNEWGQCNILEIVAK 258 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig2033.6701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig2033.6701.1 >prot_Ecto-sp13_S_contig2033.6701.1 ID=prot_Ecto-sp13_S_contig2033.6701.1|Name=mRNA_Ecto-sp13_S_contig2033.6701.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=189bp MMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDWYDKRVGAAback to top mRNA from alignment at Ecto-sp13_S_contig2033:13317..14909+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig2033.6701.1 ID=mRNA_Ecto-sp13_S_contig2033.6701.1|Name=mRNA_Ecto-sp13_S_contig2033.6701.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1593bp|location=Sequence derived from alignment at Ecto-sp13_S_contig2033:13317..14909+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig2033:13317..14909+ >mRNA_Ecto-sp13_S_contig2033.6701.1 ID=mRNA_Ecto-sp13_S_contig2033.6701.1|Name=mRNA_Ecto-sp13_S_contig2033.6701.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=567bp|location=Sequence derived from alignment at Ecto-sp13_S_contig2033:13317..14909+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |