mRNA_Ecto-sp13_S_contig20321.6698.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20321.6698.1 vs. uniprot
Match: A0A6H5KTA9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTA9_9PHAE) HSP 1 Score: 243 bits (621), Expect = 7.750e-77 Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 1
Query: 1 RALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLNDIDVFEIHEAFAGQVLSNLAAMNSNDFAQKSMGRSAKLGEVPMEKLNIHGGSLSLGHPFGATGVRLVATATNRLHRE 372
RALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLNDIDVFEIHEAFAGQVLSNLAAMNS DFAQKSMGRSAKLGEVPMEKLNIHGGSLSLGHPFGATGVRLVATATNRLHRE
Sbjct: 326 RALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLNDIDVFEIHEAFAGQVLSNLAAMNSTDFAQKSMGRSAKLGEVPMEKLNIHGGSLSLGHPFGATGVRLVATATNRLHRE 449
BLAST of mRNA_Ecto-sp13_S_contig20321.6698.1 vs. uniprot
Match: A0A835ZCM0_9STRA (Acetyl-CoA acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCM0_9STRA) HSP 1 Score: 207 bits (528), Expect = 3.460e-63 Identity = 104/124 (83.87%), Postives = 111/124 (89.52%), Query Frame = 1
Query: 1 RALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLNDIDVFEIHEAFAGQVLSNLAAMNSNDFAQKSMGRSAKLGEVPMEKLNIHGGSLSLGHPFGATGVRLVATATNRLHRE 372
+A EMGL PRS FKSWAFVA+DPFEDLLLGPAFG A+VLDDAGLTL DIDVFEIHEAFAGQVLSNLAAM+S+ F ++SMGRS KLG VPMEKLN GGSLSLGHPFGATG RLV TATNRLHRE
Sbjct: 300 KAKEMGLTPRSFFKSWAFVAVDPFEDLLLGPAFGIARVLDDAGLTLKDIDVFEIHEAFAGQVLSNLAAMDSDKFCKESMGRSGKLGAVPMEKLNTLGGSLSLGHPFGATGTRLVTTATNRLHRE 423
BLAST of mRNA_Ecto-sp13_S_contig20321.6698.1 vs. uniprot
Match: A0A7S2UU92_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU92_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.090e-55 Identity = 93/125 (74.40%), Postives = 112/125 (89.60%), Query Frame = 1
Query: 1 RALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLNDIDVFEIHEAFAGQVLSNLAAMNSNDFAQKSM-GRSAKLGEVPMEKLNIHGGSLSLGHPFGATGVRLVATATNRLHRE 372
RAL +GL P+++ +++ FVA+DPFE+LLLGPA+ +AKVL DAGLTL+DIDVFEIHEAFAGQVL+NLAAMNS+ FA + GR++KLGEVPMEKLNIHGGSLSLGHPFGATG RL+ TA+NRLHRE
Sbjct: 288 RALALGLQPKATLRAFDFVAIDPFEELLLGPAYASAKVLADAGLTLDDIDVFEIHEAFAGQVLANLAAMNSDKFAADRLPGRTSKLGEVPMEKLNIHGGSLSLGHPFGATGTRLLTTASNRLHRE 412
BLAST of mRNA_Ecto-sp13_S_contig20321.6698.1 vs. uniprot
Match: A0A7S4BE12_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BE12_CHRCT) HSP 1 Score: 162 bits (409), Expect = 1.380e-47 Identity = 78/124 (62.90%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 1 RALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLNDIDVFEIHEAFAGQVLSNLAAMNSNDFAQKSMGRSAKLGEVPMEKLNIHGGSLSLGHPFGATGVRLVATATNRLHRE 372
+A +G AP++ + W FV+ DPFEDLLLGP + VL AGLTL DIDV E HEAFAGQ+LSNL A++S+ F KSM + K+G VPMEK N+HGGSLSLGHPFGATG RLV T NRL RE
Sbjct: 99 KAEALGFAPKAYLREWVFVSCDPFEDLLLGPTYAVTSVLKKAGLTLKDIDVIEFHEAFAGQILSNLKALDSDAFFAKSMPGTQKVGAVPMEKFNVHGGSLSLGHPFGATGARLVTTVANRLKRE 222
BLAST of mRNA_Ecto-sp13_S_contig20321.6698.1 vs. uniprot
Match: A0A7S0Q611_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q611_9EUKA) HSP 1 Score: 167 bits (423), Expect = 1.950e-47 Identity = 79/124 (63.71%), Postives = 97/124 (78.23%), Query Frame = 1
Query: 1 RALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLNDIDVFEIHEAFAGQVLSNLAAMNSNDFAQKSMGRSAKLGEVPMEKLNIHGGSLSLGHPFGATGVRLVATATNRLHRE 372
+A E+GL P++ + W FV+ DPFEDLLLGP + A KVL+ AGLTL D+DV E HEAFAGQ+LSNLAA++S+ F +K++ K+G +PMEK NIHGGSLSLGHPFGATG RLV T NRL RE
Sbjct: 318 KAKELGLKPKAFLREWTFVSCDPFEDLLLGPTYAATKVLNMAGLTLKDMDVIEFHEAFAGQILSNLAALDSDKFYEKNIPGQQKVGAIPMEKFNIHGGSLSLGHPFGATGARLVTTVANRLQRE 441
BLAST of mRNA_Ecto-sp13_S_contig20321.6698.1 vs. uniprot
Match: A0A7S2AT36_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AT36_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.690e-46 Identity = 81/123 (65.85%), Postives = 98/123 (79.67%), Query Frame = 1
Query: 1 RALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLNDIDVFEIHEAFAGQVLSNLAAMNSNDFAQKSMGRSAKLGEVPMEKLNIHGGSLSLGHPFGATGVRLVATATNRLHR 369
+ALE+G P+S K+W++VA DPFEDLLLGP + A+VL A LTLNDIDV E HEAFAGQVLSNLAAM S F+Q+ +G K+GE+PM+K+N GGSLSLGHPFGATG RLV TA+NR+ R
Sbjct: 289 KALELGYVPKSILKAWSYVACDPFEDLLLGPTYSTAQVLKRAQLTLNDIDVVEFHEAFAGQVLSNLAAMGSEKFSQEQLG-GLKIGEIPMDKINTQGGSLSLGHPFGATGGRLVTTASNRMLR 410
BLAST of mRNA_Ecto-sp13_S_contig20321.6698.1 vs. uniprot
Match: A0A816E662_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A816E662_ADIRI) HSP 1 Score: 164 bits (416), Expect = 3.670e-46 Identity = 78/124 (62.90%), Postives = 100/124 (80.65%), Query Frame = 1
Query: 1 RALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLNDIDVFEIHEAFAGQVLSNLAAMNSNDFAQKSMGRSAKLGEVPMEKLNIHGGSLSLGHPFGATGVRLVATATNRLHRE 372
+A E+GL P++ + + F + DP + LLLGP + AK+L+ AGLTLNDIDVFE HEAFAGQ+L+NL A+NS+ FAQK + RS+K+GE+P+EK N+ GGSLSLGHPFGATGVRLV TA NRL +E
Sbjct: 350 KAKELGLKPKAYLRRYIFTSQDPKDQLLLGPTYATAKLLEQAGLTLNDIDVFEFHEAFAGQILANLKALNSDYFAQKYLNRSSKVGEIPLEKFNVWGGSLSLGHPFGATGVRLVTTAANRLIKE 473
BLAST of mRNA_Ecto-sp13_S_contig20321.6698.1 vs. uniprot
Match: A0A4D9CSC7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSC7_9STRA) HSP 1 Score: 161 bits (407), Expect = 9.230e-46 Identity = 78/116 (67.24%), Postives = 91/116 (78.45%), Query Frame = 1
Query: 25 PRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLNDIDVFEIHEAFAGQVLSNLAAMNSNDFAQKSMGRSAKLGEVPMEKLNIHGGSLSLGHPFGATGVRLVATATNRLHRE 372
P++ ++W FVA+DPFE LLLGP + AKVL AGLTL DIDV EIHEAFAGQVLSN AM S+ FAQ+ + RS K+G++ M K N+HGGSLSLGHPF ATG RLV TA NRLHRE
Sbjct: 247 PKAFLRAWEFVAVDPFEQLLLGPTYATAKVLSAAGLTLADIDVIEIHEAFAGQVLSNFRAMGSDKFAQEYLNRSTKVGDIDMAKTNLHGGSLSLGHPFAATGNRLVTTAANRLHRE 362
BLAST of mRNA_Ecto-sp13_S_contig20321.6698.1 vs. uniprot
Match: A0A2G8LHD4_STIJA (Uncharacterized protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LHD4_STIJA) HSP 1 Score: 164 bits (415), Expect = 1.100e-45 Identity = 79/124 (63.71%), Postives = 97/124 (78.23%), Query Frame = 1
Query: 1 RALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLNDIDVFEIHEAFAGQVLSNLAAMNSNDFAQKSMGRSAKLGEVPMEKLNIHGGSLSLGHPFGATGVRLVATATNRLHRE 372
+ALEMG P++ + + FVA+DP + LLLGPA+ +VLD AGL L+DIDVFE HEAFAGQ+LSNL AMNS+ FA+K R KLGE+PM+K N+ GGSLS+GHPFGATGVRLV T NRL +E
Sbjct: 398 KALEMGYKPKAYLRDFVFVAIDPKDQLLLGPAYATPQVLDKAGLKLSDIDVFEYHEAFAGQILSNLKAMNSDHFAKKYQHRKGKLGEIPMDKFNLWGGSLSIGHPFGATGVRLVTTVANRLEKE 521
BLAST of mRNA_Ecto-sp13_S_contig20321.6698.1 vs. uniprot
Match: A0A7S3ZZ14_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZ14_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.430e-45 Identity = 75/124 (60.48%), Postives = 98/124 (79.03%), Query Frame = 1
Query: 1 RALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLNDIDVFEIHEAFAGQVLSNLAAMNSNDFAQKSMGRSAKLGEVPMEKLNIHGGSLSLGHPFGATGVRLVATATNRLHRE 372
+ALE+G AP++ +W F A+DPFE++LLGP + AKVLD AG++L+DIDV E HEAFAGQVL+N AM+S++F ++ +GR +G + M+K+N HGGSLSLGHPFGATG RLV TA NRL RE
Sbjct: 293 KALELGYAPKAYLNNWTFAAVDPFEEMLLGPTYATAKVLDMAGVSLDDIDVVEFHEAFAGQVLANFNAMSSDEFGREKLGRQGAVGTMNMDKVNPHGGSLSLGHPFGATGARLVTTAANRLQRE 416 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20321.6698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20321.6698.1 >prot_Ecto-sp13_S_contig20321.6698.1 ID=prot_Ecto-sp13_S_contig20321.6698.1|Name=mRNA_Ecto-sp13_S_contig20321.6698.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=120bp MGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLNDIDVFEIback to top mRNA from alignment at Ecto-sp13_S_contig20321:138..1812+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20321.6698.1 ID=mRNA_Ecto-sp13_S_contig20321.6698.1|Name=mRNA_Ecto-sp13_S_contig20321.6698.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1675bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20321:138..1812+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20321:138..1812+ >mRNA_Ecto-sp13_S_contig20321.6698.1 ID=mRNA_Ecto-sp13_S_contig20321.6698.1|Name=mRNA_Ecto-sp13_S_contig20321.6698.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=360bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20321:138..1812+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |