mRNA_Ecto-sp13_S_contig20311.6693.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20311.6693.1 vs. uniprot
Match: A0A6H5K078_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K078_9PHAE) HSP 1 Score: 386 bits (991), Expect = 6.020e-126 Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 1
Query: 1 MRAQRLRDLGFLVLKCDNRGSFRRGLAFEAWVKWRMGGVEITDQEDCVHWAVKKGLADPARVGIYGWSYGGYATAMCLCKAPNTFRVGVSGAPVTAWDGYDTHYTERYMGTPMENPEGYTESSVLTHASKLEGKLMLVHGLMDENVHFRHTARLINALIAARKPYDLLIFPDERHSPRKLQVR 549
MRAQRLRDLGFLVLKCDNRGSFRRGLAFEAWVKWRMGGVEITDQEDCVHWAVKKGLADPARVGIYGWSYGGYATAMCLCKAPNTFRVGVSGAPVTAWDGYDTHYTERYMGTPMENP+GYTESSVLTHASKLEGKLMLVHGLMDENVHFRHTARLINALIAARKPYDLLIFPDERHSPRKLQ R
Sbjct: 756 MRAQRLRDLGFLVLKCDNRGSFRRGLAFEAWVKWRMGGVEITDQEDCVHWAVKKGLADPARVGIYGWSYGGYATAMCLCKAPNTFRVGVSGAPVTAWDGYDTHYTERYMGTPMENPKGYTESSVLTHASKLEGKLMLVHGLMDENVHFRHTARLINALIAARKPYDLLIFPDERHSPRKLQDR 938
BLAST of mRNA_Ecto-sp13_S_contig20311.6693.1 vs. uniprot
Match: A0A7S4JFV3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JFV3_9STRA) HSP 1 Score: 273 bits (699), Expect = 1.260e-90 Identity = 125/183 (68.31%), Postives = 146/183 (79.78%), Query Frame = 1
Query: 1 MRAQRLRDLGFLVLKCDNRGSFRRGLAFEAWVKWRMGGVEITDQEDCVHWAVKKGLADPARVGIYGWSYGGYATAMCLCKAPNTFRVGVSGAPVTAWDGYDTHYTERYMGTPMENPEGYTESSVLTHASKLEGKLMLVHGLMDENVHFRHTARLINALIAARKPYDLLIFPDERHSPRKLQVR 549
MRA RL LGF V+KCDNRGS RRGL FE+ ++ R+G +E+ DQ V +G+ADP RVG+YGWSYGGY AMCLC+AP+ F V V+GAPVT+WDGYDTHYTERYMG P ENPEGY ES+V H + G+LM+VHGL+DENVHFRHTARLIN LIAA K YDLLIFPDERHSPR+L+ R
Sbjct: 11 MRAPRLCSLGFAVVKCDNRGSARRGLKFESSIRKRLGRLEVLDQVTAVRHLAARGVADPTRVGVYGWSYGGYLAAMCLCRAPDVFHVAVAGAPVTSWDGYDTHYTERYMGLPAENPEGYGESAVFDHVPNMRGRLMIVHGLIDENVHFRHTARLINRLIAAGKDYDLLIFPDERHSPRRLRDR 193
BLAST of mRNA_Ecto-sp13_S_contig20311.6693.1 vs. uniprot
Match: A0A7S4JFT4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JFT4_9STRA) HSP 1 Score: 276 bits (705), Expect = 1.690e-89 Identity = 126/183 (68.85%), Postives = 147/183 (80.33%), Query Frame = 1
Query: 1 MRAQRLRDLGFLVLKCDNRGSFRRGLAFEAWVKWRMGGVEITDQEDCVHWAVKKGLADPARVGIYGWSYGGYATAMCLCKAPNTFRVGVSGAPVTAWDGYDTHYTERYMGTPMENPEGYTESSVLTHASKLEGKLMLVHGLMDENVHFRHTARLINALIAARKPYDLLIFPDERHSPRKLQVR 549
MRAQRL LGF V+KCDNRGS RRGL FE+ ++ R+G +E+ DQ V +G+ADP RVG+YGWSYGGY AMCLC+AP+ F V V+GAPVT+WDGYDTHYTERYMG P ENPEGY ES+V H + G+LM+VHGL+DENVHFRHTARLIN LIAA K YDLLIFPDERHSPR+L+ R
Sbjct: 158 MRAQRLCSLGFAVVKCDNRGSARRGLKFESSIRKRLGRLEVLDQVTAVRHLAARGVADPTRVGVYGWSYGGYLAAMCLCRAPDVFHVAVAGAPVTSWDGYDTHYTERYMGLPAENPEGYGESAVFDHVPNMRGRLMIVHGLIDENVHFRHTARLINRLIAAGKDYDLLIFPDERHSPRRLRDR 340
BLAST of mRNA_Ecto-sp13_S_contig20311.6693.1 vs. uniprot
Match: A0A7S0Z093_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z093_9CRYP) HSP 1 Score: 278 bits (710), Expect = 4.260e-89 Identity = 126/183 (68.85%), Postives = 153/183 (83.61%), Query Frame = 1
Query: 1 MRAQRLRDLGFLVLKCDNRGSFRRGLAFEAWVKWRMGGVEITDQEDCVHWAVKKGLADPARVGIYGWSYGGYATAMCLCKAPNTFRVGVSGAPVTAWDGYDTHYTERYMGTPMENPEGYTESSVLTHASKLEGKLMLVHGLMDENVHFRHTARLINALIAARKPYDLLIFPDERHSPRKLQVR 549
+RAQ LR G+LVLK DNRGS RRGLAFEA++K MG +E+ DQ V WA ++GL DP+RVGIYGWSYGGY +AM L +AP+TF +G+SGAPVT WDGYDTHYTERYMGTP NPEGY SSV++H +++G L+LVHGL+DENVHFRHTARLINA+I+A+K Y+LL+FPDERHSPR L+ R
Sbjct: 273 LRAQFLRSQGYLVLKLDNRGSSRRGLAFEAFIKNNMGDLEVQDQAAGVRWAAERGLCDPSRVGIYGWSYGGYMSAMALARAPDTFCIGISGAPVTNWDGYDTHYTERYMGTPAGNPEGYARSSVMSHVDRIQGSLLLVHGLIDENVHFRHTARLINAIISAQKHYELLLFPDERHSPRSLKDR 455
BLAST of mRNA_Ecto-sp13_S_contig20311.6693.1 vs. uniprot
Match: A0A7S2SUA5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUA5_9STRA) HSP 1 Score: 286 bits (733), Expect = 5.310e-89 Identity = 132/183 (72.13%), Postives = 149/183 (81.42%), Query Frame = 1
Query: 1 MRAQRLRDLGFLVLKCDNRGSFRRGLAFEAWVKWRMGGVEITDQEDCVHWAVKKGLADPARVGIYGWSYGGYATAMCLCKAPNTFRVGVSGAPVTAWDGYDTHYTERYMGTPMENPEGYTESSVLTHASKLEGKLMLVHGLMDENVHFRHTARLINALIAARKPYDLLIFPDERHSPRKLQVR 549
MRAQ LR LGFLVLKCDNRGS RRG AFEA + +G +E+ DQED V WA ++GL DP RVGIYGWSYGGY AM LC+ F+V V+GAPV++WDGYDTHYTERYMGTP +NPEGY SSV THA + G LMLVHGL+DENVHFRHTARLINAL+AARK YDLL+FPDERHSPR+L R
Sbjct: 588 MRAQWLRSLGFLVLKCDNRGSARRGFAFEAKIHRSLGNIEVQDQEDLVRWAAEQGLGDPGRVGIYGWSYGGYLAAMALCRPSPLFQVAVAGAPVSSWDGYDTHYTERYMGTPQDNPEGYNMSSVCTHAKNMNGSLMLVHGLIDENVHFRHTARLINALVAARKRYDLLLFPDERHSPRRLTDR 770
BLAST of mRNA_Ecto-sp13_S_contig20311.6693.1 vs. uniprot
Match: A0A7S1FNB5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNB5_9STRA) HSP 1 Score: 276 bits (707), Expect = 7.710e-89 Identity = 129/183 (70.49%), Postives = 148/183 (80.87%), Query Frame = 1
Query: 1 MRAQRLRDLGFLVLKCDNRGSFRRGLAFEAWVKWRMGGVEITDQEDCVHWAVKKGLADPARVGIYGWSYGGYATAMCLCKAPNTFRVGVSGAPVTAWDGYDTHYTERYMGTPMENPEGYTESSVLTHASKLEGKLMLVHGLMDENVHFRHTARLINALIAARKPYDLLIFPDERHSPRKLQVR 549
+RAQRLRDLGF V+KCDNRGS RRGLAFE + R+G VE+ DQ V V +G+AD RVGIYGWSYGGY AM LC+AP TF V V+GAPVT+WDGYDTHYTERYMGTP +NP GY +SSVL H + G+L+LVHGL+DENVHFRHTARLIN LIAA K YDLL+FPDERHSPR+L+ R
Sbjct: 235 LRAQRLRDLGFAVVKCDNRGSSRRGLAFEGAIARRLGNVEVRDQVCVVRHLVAQGVADRERVGIYGWSYGGYLAAMALCRAPETFHVAVAGAPVTSWDGYDTHYTERYMGTPADNPTGYRDSSVLEHVDMMRGRLLLVHGLIDENVHFRHTARLINKLIAAGKDYDLLLFPDERHSPRRLRDR 417
BLAST of mRNA_Ecto-sp13_S_contig20311.6693.1 vs. uniprot
Match: A0A7S1DTN3_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DTN3_HEMAN) HSP 1 Score: 276 bits (706), Expect = 2.370e-88 Identity = 127/183 (69.40%), Postives = 148/183 (80.87%), Query Frame = 1
Query: 1 MRAQRLRDLGFLVLKCDNRGSFRRGLAFEAWVKWRMGGVEITDQEDCVHWAVKKGLADPARVGIYGWSYGGYATAMCLCKAPNTFRVGVSGAPVTAWDGYDTHYTERYMGTPMENPEGYTESSVLTHASKLEGKLMLVHGLMDENVHFRHTARLINALIAARKPYDLLIFPDERHSPRKLQVR 549
+RAQ LR G+LVLK DNRGS RRGLAFE +K MG +E+ DQ V WAV+ GL DP RVGIYGWSYGGY +AM L +AP F +G+SGAPVT+WDGYDTHYTERYMGTP NPEGY SSV+TH K+EG L+LVHGL+DENVHFRHTARLINA+I+ +K Y+LL+FPDERHSPR L+ R
Sbjct: 285 LRAQFLRSQGYLVLKLDNRGSSRRGLAFETCIKGNMGDLEVQDQVAGVQWAVQNGLCDPTRVGIYGWSYGGYMSAMALARAPEVFCIGISGAPVTSWDGYDTHYTERYMGTPAGNPEGYARSSVMTHVDKIEGSLLLVHGLIDENVHFRHTARLINAIISNQKHYELLLFPDERHSPRSLKDR 467
BLAST of mRNA_Ecto-sp13_S_contig20311.6693.1 vs. uniprot
Match: A0A7S0GDC4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GDC4_9STRA) HSP 1 Score: 271 bits (693), Expect = 4.300e-88 Identity = 123/183 (67.21%), Postives = 148/183 (80.87%), Query Frame = 1
Query: 1 MRAQRLRDLGFLVLKCDNRGSFRRGLAFEAWVKWRMGGVEITDQEDCVHWAVKKGLADPARVGIYGWSYGGYATAMCLCKAPNTFRVGVSGAPVTAWDGYDTHYTERYMGTPMENPEGYTESSVLTHASKLEGKLMLVHGLMDENVHFRHTARLINALIAARKPYDLLIFPDERHSPRKLQVR 549
MRAQRL LGF V+KCDNRGS RRGL+FE +K R+G E+ DQ V + V+ +ADP RVG+YGWSYGGY +AMCLC+AP+ F V V+GAPVT+WDGYDTHYTERYMG P +N GY E++V H S ++GKLM+VHGL+DENVHFRHTARLIN LIAA K YDLL+FP+ERHSPR+L+ R
Sbjct: 31 MRAQRLCSLGFAVVKCDNRGSSRRGLSFEGTIKHRLGHWEVLDQVTAVRYLVQHNIADPRRVGVYGWSYGGYLSAMCLCRAPDVFSVAVAGAPVTSWDGYDTHYTERYMGLPSQNTRGYREAAVFDHVSNMKGKLMIVHGLIDENVHFRHTARLINRLIAAGKDYDLLLFPEERHSPRRLRDR 213
BLAST of mRNA_Ecto-sp13_S_contig20311.6693.1 vs. uniprot
Match: A0A7S1GPP0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GPP0_CYCTE) HSP 1 Score: 271 bits (694), Expect = 5.250e-88 Identity = 125/183 (68.31%), Postives = 145/183 (79.23%), Query Frame = 1
Query: 1 MRAQRLRDLGFLVLKCDNRGSFRRGLAFEAWVKWRMGGVEITDQEDCVHWAVKKGLADPARVGIYGWSYGGYATAMCLCKAPNTFRVGVSGAPVTAWDGYDTHYTERYMGTPMENPEGYTESSVLTHASKLEGKLMLVHGLMDENVHFRHTARLINALIAARKPYDLLIFPDERHSPRKLQVR 549
MRAQRLR LGF V+KCDNRGS RRGL FE ++ R+G +E+ DQ V +G+ADP RVGIYGWSYGGY AMCLC+AP+ F V ++GAPVT+WDGYDTHYTERYM P +NP GY ES+V H ++GKLMLVHGL+DENVHFRHT RLIN LIAA K YDLLIFPDERHSPR+L+ R
Sbjct: 156 MRAQRLRSLGFAVVKCDNRGSSRRGLVFEGSIRRRLGRLEVLDQVAAVEHLTGRGIADPKRVGIYGWSYGGYLAAMCLCRAPDIFHVAIAGAPVTSWDGYDTHYTERYMCLPGDNPNGYRESAVFDHVPNMKGKLMLVHGLIDENVHFRHTVRLINRLIAAGKDYDLLIFPDERHSPRRLRDR 338
BLAST of mRNA_Ecto-sp13_S_contig20311.6693.1 vs. uniprot
Match: A0A6N7PRJ9_9DELT (Prolyl oligopeptidase family serine peptidase n=1 Tax=Polyangium spumosum TaxID=889282 RepID=A0A6N7PRJ9_9DELT) HSP 1 Score: 281 bits (720), Expect = 5.300e-88 Identity = 130/179 (72.63%), Postives = 145/179 (81.01%), Query Frame = 1
Query: 1 MRAQRLRDLGFLVLKCDNRGSFRRGLAFEAWVKWRMGGVEITDQEDCVHWAVKKGLADPARVGIYGWSYGGYATAMCLCKAPNTFRVGVSGAPVTAWDGYDTHYTERYMGTPMENPEGYTESSVLTHASKLEGKLMLVHGLMDENVHFRHTARLINALIAARKPYDLLIFPDERHSPRK 537
MR Q LR LG+LV DNRGS RRGL+FE +K RMG VE+ DQ D V + V GLADPARVG+YGWSYGGY AMCL +AP TF+V VSGAPVT WDGYDTHYTERYMGTP ENP GY ESSV+ H + GKLMLVHGL+DENVHFRHTARL+NA+I ARKPYDLL+FPDERH PR+
Sbjct: 531 MRPQWLRSLGYLVFMLDNRGSARRGLSFEGAIKHRMGSVEVDDQVDGVRFLVANGLADPARVGVYGWSYGGYMAAMCLARAPETFKVAVSGAPVTHWDGYDTHYTERYMGTPSENPRGYEESSVMRHVEGIRGKLMLVHGLIDENVHFRHTARLVNAMIGARKPYDLLLFPDERHMPRR 709 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20311.6693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20311.6693.1 >prot_Ecto-sp13_S_contig20311.6693.1 ID=prot_Ecto-sp13_S_contig20311.6693.1|Name=mRNA_Ecto-sp13_S_contig20311.6693.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp MRAQRLRDLGFLVLKCDNRGSFRRGLAFEAWVKWRMGGVEITDQEDCVHWback to top mRNA from alignment at Ecto-sp13_S_contig20311:562..2230+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20311.6693.1 ID=mRNA_Ecto-sp13_S_contig20311.6693.1|Name=mRNA_Ecto-sp13_S_contig20311.6693.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1669bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20311:562..2230+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20311:562..2230+ >mRNA_Ecto-sp13_S_contig20311.6693.1 ID=mRNA_Ecto-sp13_S_contig20311.6693.1|Name=mRNA_Ecto-sp13_S_contig20311.6693.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=549bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20311:562..2230+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |