mRNA_Ecto-sp13_S_contig203.6678.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig203.6678.1 vs. uniprot
Match: A0A6H5JCA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCA6_9PHAE) HSP 1 Score: 922 bits (2384), Expect = 0.000e+0 Identity = 519/618 (83.98%), Postives = 535/618 (86.57%), Query Frame = 1
Query: 1 EPTVRVAELSDDIGTRSVHNGVHQRDRQLWLETRAKDIREGRTGTGSTKSVDEESGSNASSDGGAQDRXXXXSDATARAAXXXXXXXXXXXXXTAA---TQIGTAEEARLSASAAADGIREGDETATGGREAAVSGGDGNDARGSRRRANSSSRGSSSGPNRSLQRGRGGDVHRENGVAPGGPGVGXXXXXXXXXXXXXXXXXXXXXRALGDDPPPGQGDMEGGEVAAFEPLPLEERLSRLETGVELWGATYVPPIAPEEVRRLTEKWTAVGAVSGAAXXXXXXXXXXXXXXTSTTATPDQVEAPSILFVVTSFDRGRRLGLRGKGVDKLDYVLMIMDEIRGACEAGFSPHVHLISAWKAQPELELFTDRLLCRRIGGPVTLTLEEHPPSIKEALSIKHRIYMKPRVRAYDLFVQLEDDMILTVNHILTYLEESEKLSLRNIGTRPRAMPMHDFMPGFVRVEPEPGATGVGGEWFEWEIILSRFRGVHVVGAGTYLALEKSRVLPFSGNNQGFWMATQEQLKYLCRQCQYLRYTDQSSVPFVEKFSGSLEMFSPPCHATKVFPAERFENLLVHHRTNNKNGKRGESTPAVSVSMLRLWAAQVVRDDEMLMEVGQTGRR 1845
E V VAELSDDIGTRSVHNGVHQR+RQLWLETRAKDIREGRTGTGS+KSVDEESGSNA SD GAQ R S ATARA XXXXXXXXXXXXX TQ+GTAEEARLSASAAADGIREGDETATGG + SSGPNRSLQRGRGGDVHREN V PGGPGVG RALGD+PPPGQGDMEGGEVAAFEPLPLEERLSRLETGVELWGATYVPPIAP+E+RRLTEKWTAVGAVSGA XXXXXXXXXXXXXX STTA PDQVE PSILFVVTSFDRGRRLGLR KGVDKLDYVLMIMDEIRGACEAGFSPHVHLISAW+AQPELELFTDRLLCR+IGGPVTLTLE+HPPSIKE LSIKHRIYMKPRVR YDLFVQLEDDMILTVNHILTYLEESEKLSLRNIG+RP AMPMHD+MPGF+RVEP+PGATGVGGEWFEWEIILSRFRGVHVVGAGTYL LEKSRVLP SGNNQGFWMATQEQLKYLCRQCQYLRY +QSS PFVEKFSGSLEMFSPPCH TKVFPAERFENLLVHHRTNNKNG+RGES PAV VSMLRLWAAQVVRD EMLMEVGQTGRR
Sbjct: 71 EDGVHVAELSDDIGTRSVHNGVHQRERQLWLETRAKDIREGRTGTGSSKSVDEESGSNAISDSGAQGRESGSSAATARAXXXXXXXXXXXXXXXXXXXXTQMGTAEEARLSASAAADGIREGDETATGGGDPXXXXXXXXXXXXXXXXXXXXXXXXSSGPNRSLQRGRGGDVHRENDVTPGGPGVGRGGGGEEKQPLEGGKGEGGF-RALGDEPPPGQGDMEGGEVAAFEPLPLEERLSRLETGVELWGATYVPPIAPKEMRRLTEKWTAVGAVSGAXXXXXXXXXXXXXXXASTTAAPDQVEMPSILFVVTSFDRGRRLGLRRKGVDKLDYVLMIMDEIRGACEAGFSPHVHLISAWEAQPELELFTDRLLCRKIGGPVTLTLEKHPPSIKETLSIKHRIYMKPRVREYDLFVQLEDDMILTVNHILTYLEESEKLSLRNIGSRPGAMPMHDYMPGFIRVEPKPGATGVGGEWFEWEIILSRFRGVHVVGAGTYLGLEKSRVLPISGNNQGFWMATQEQLKYLCRQCQYLRYAEQSSDPFVEKFSGSLEMFSPPCHTTKVFPAERFENLLVHHRTNNKNGQRGESVPAVPVSMLRLWAAQVVRDGEMLMEVGQTGRR 687
BLAST of mRNA_Ecto-sp13_S_contig203.6678.1 vs. uniprot
Match: D7G8K3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K3_ECTSI) HSP 1 Score: 733 bits (1892), Expect = 6.350e-260 Identity = 377/398 (94.72%), Postives = 383/398 (96.23%), Query Frame = 1
Query: 652 MEGGEVAAFEPLPLEERLSRLETGVELWGATYVPPIAPEEVRRLTEKWTAVGAVSGAAXXXXXXXXXXXXXXTSTTATPDQVEAPSILFVVTSFDRGRRLGLRGKGVDKLDYVLMIMDEIRGACEAGFSPHVHLISAWKAQPELELFTDRLLCRRIGGPVTLTLEEHPPSIKEALSIKHRIYMKPRVRAYDLFVQLEDDMILTVNHILTYLEESEKLSLRNIGTRPRAMPMHDFMPGFVRVEPEPGATGVGGEWFEWEIILSRFRGVHVVGAGTYLALEKSRVLPFSGNNQGFWMATQEQLKYLCRQCQYLRYTDQSSVPFVEKFSGSLEMFSPPCHATKVFPAERFENLLVHHRTNNKNGKRGESTPAVSVSMLRLWAAQVVRDDEMLMEVGQTGRR 1845
MEGGEVAAFEPLPLEERL RLETGVELWGATYVPPIAPEE+RRLT+KWTAVGAVSGA XXXXXXXXXXXXXX T AT VEAPSILFVVTSFDRGRRLG RGKGVDKL+YVLMIMDEIRGACEAGFSPHVHLISAW+AQPE+ELFTDRLLCRRIGGPVTLTLEEHPPSIKEALSIKHRIYMKPRVR YDLFVQLEDDMILTVNHIL YLEESEKLSLRNIGTRPRAMPMHD+MPGFVRVEPEPGATGVGGEWFEWEIILSRFRGVHVVGAGTYL LEKSRVLPFSGNNQGFWMATQEQLKYLCRQCQYLRYT QSSVPFVEKFSGSLEMFSPPCH TKVFPAERFEN LVHHRTNNKNGKRGESTPAVSVSMLRLWAAQVVRDDEMLMEVGQTGRR
Sbjct: 1 MEGGEVAAFEPLPLEERLGRLETGVELWGATYVPPIAPEEMRRLTDKWTAVGAVSGAXXXXXXXXXXXXXXXXXTAATT--VEAPSILFVVTSFDRGRRLGRRGKGVDKLNYVLMIMDEIRGACEAGFSPHVHLISAWEAQPEVELFTDRLLCRRIGGPVTLTLEEHPPSIKEALSIKHRIYMKPRVREYDLFVQLEDDMILTVNHILKYLEESEKLSLRNIGTRPRAMPMHDYMPGFVRVEPEPGATGVGGEWFEWEIILSRFRGVHVVGAGTYLGLEKSRVLPFSGNNQGFWMATQEQLKYLCRQCQYLRYTGQSSVPFVEKFSGSLEMFSPPCHTTKVFPAERFENFLVHHRTNNKNGKRGESTPAVSVSMLRLWAAQVVRDDEMLMEVGQTGRR 396
BLAST of mRNA_Ecto-sp13_S_contig203.6678.1 vs. uniprot
Match: A0A6H5KYA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYA1_9PHAE) HSP 1 Score: 363 bits (932), Expect = 2.390e-110 Identity = 197/401 (49.13%), Postives = 251/401 (62.59%), Query Frame = 1
Query: 658 GGEVAAFEPLPLEERLSRLETGVELWGATYVPPIAPEEVRRLTEKWT-------AVGAVSGAAXXXXXXXXXXXXXXTSTTATPDQVEAPSILFVVTSFDRGRRLGLRGKG-VDKLDYVLMIMDEIRGACEAGFSPHVHLISAWKAQPELELFTDRLLCRRIGGPVTLTLEEHPPSIKEALSIKHRIYMKPRVRAYDLFVQLEDDMILTVNHILTYLEESEKLSLRNIGTRPRAMPMHDFMPGFVRVEP----EPGATGVGGEWFEWEIILSRFRGVHVVGAGTYLALEKSRVLPFSGNNQGFWMATQEQLKYLC--RQCQYLRYTDQSSVPFVEKFSGSLEMFSPPCHATKVFPAERFENLLVHHRTNNKNGKRGESTPAVSVSMLRLWAAQVVRDDEML 1818
G E A L ER+ RL+ G ELW TYVPPI P R L KW+ A GA G E+ IL+V++S+DRG+RLGL G VDKLDY+LM+MDE+R ACEAGFSPHVHLI+AW +L DRL C+R G V + EEHPPS++ L+IKHRIYMK RV +D+F+Q+EDDMI+T+NHIL Y EE + L +R R P + F+PGF+RVEP + GEWFEWEI+ F +++ GAGTY++L S+VLP +GNNQG WMAT+EQLK + + C YL + + S+ E SGS++MF P C KVFPA FE+ +VHHRTNNKNG+ GES P VS +MLR+WA Q +RD+ ML
Sbjct: 397 GEERAQQSSLAATERVWRLKRGAELWPGTYVPPIEPTRRRELIYKWSYGKGPEEAAGATGG--------------------------ESGRILYVISSYDRGKRLGLGYNGKVDKLDYILMMMDEMREACEAGFSPHVHLIAAWDTSEVADLIRDRLFCQRTGDLVPYSHEEHPPSVRNNLAIKHRIYMKSRVEDFDVFMQVEDDMIVTLNHILLYREECDNLDIRFGMGGSRGRP-NVFVPGFLRVEPGGTKDKEKDKGEGEWFEWEIV---FNPINIYGAGTYMSLTPSKVLPRAGNNQGMWMATREQLKKMAANKACNYLEFDESSTNGIPEMHSGSIQMFLPECGFIKVFPATHFEDFMVHHRTNNKNGRAGESIPGVSTAMLRVWAGQFLRDEGML 767
BLAST of mRNA_Ecto-sp13_S_contig203.6678.1 vs. uniprot
Match: D7G997_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G997_ECTSI) HSP 1 Score: 344 bits (883), Expect = 6.770e-104 Identity = 197/412 (47.82%), Postives = 246/412 (59.71%), Query Frame = 1
Query: 631 PPPGQGDMEGGEVAAFEPLP-------LEERLSRLETGVELWGATYVPPIAPEEVRRLTEKWTAVGAVSGAAXXXXXXXXXXXXXXTSTTATPDQVEAPSILFVVTSFDRGRRLGLRGKGVDKLDYVLMIMDEIRGACEAGFSPHVHLISAWKAQPELELFTDRLLCRRIGGPVTLTLEEHPPSIKEALSIKHRIYMKPRVRAYDLFVQLEDDMILTVNHILTYLEESEKLS-LRNIGTRPRAMPMHDFMPGFVRVEPEPGATGV------GGEWFEWEIILSRFRGVHVVGAGTYLALEKSRVLPFSGNNQGFWMATQEQLKYLC--RQCQYLRYTDQSSVPFVEKFSGSLEMFSPPCHATKVFPAERFENLLVHHRTNNKNGKRGESTPAVSVSMLRLWAAQVVRDDEML 1818
PPPG +A PLP +EER+ R+E GV LWGAT+VPP+ P L +KW SG A +A ILFV+TSFDRGRRLG K DKLD++L++MDEIR ACEAGFSP VHLI+AW+ DRL CRR G V +LE HP SI LSIKHRI+MKPR+ +DLF+Q+EDD+I+T+NH+L + EESE L R+ P A + +PGF+RVE G G EW EWE++LSR R V + AG +L L S +P GNNQG WMAT+EQL+ L + C YL + + S+ VE SGSL+MF P C KVFPA RFE+ LVHHR NNK+G RGES P V +S+LR W Q +RD++ L
Sbjct: 309 PPPGT-------IAGAGPLPTDVGAASVEERVHRMEEGVRLWGATFVPPVEPTRRLELIDKW------SGNAGRGRTNTSSSQEGGGDADENTRGDDAGRILFVMTSFDRGRRLGPSFKK-DKLDFILLMMDEIREACEAGFSPTVHLIAAWELSGVEVFVRDRLFCRRTGAHVPYSLEVHPSSIGNDLSIKHRIFMKPRLEEFDLFIQVEDDVIVTLNHMLLFREESELLDGRRHSDGAPLA---NTAVPGFIRVEHAAEEEGTIAGPSSGEEWQEWEVMLSRLRPVKLEEAGIFLTLGPSLPVPRGGNNQGMWMATREQLRKLSEKKSCDYLNFDESSTKGHVETHSGSLQMFRPNCGLQKVFPASRFESFLVHHRANNKHGVRGESVPGVPISLLRSWVEQFIRDEKFL 703
BLAST of mRNA_Ecto-sp13_S_contig203.6678.1 vs. uniprot
Match: D8LJ04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ04_ECTSI) HSP 1 Score: 294 bits (753), Expect = 2.320e-85 Identity = 162/340 (47.65%), Postives = 207/340 (60.88%), Query Frame = 1
Query: 697 ERLSRLETGVELWGATYVPPIAPEEVRRLTEKWT-------AVGAVSGAAXXXXXXXXXXXXXXTSTTATPDQVEAPSILFVVTSFDRGRRLGLRGKG-VDKLDYVLMIMDEIRGACEAGFSPHVHLISAWKAQPELELFTDRLLCRRIGGPVTLTLEEHPPSIKEALSIKHRIYMKPRVRAYDLFVQLEDDMILTVNHILTYLEESEKLSLRNIGTRPRAMPMHDFMPGFVRVEP----EPGATGVGGEWFEWEIILSRFRGVHVVGAGTYLALEKSRVLPFSGNNQGFWMATQEQLKYLC--RQCQYLRYTDQSSVPFVEKFSGSLEMFSPPCHATKV 1674
ER RL+ G ELW TYVPPI P R L KW+ A GA G E+ IL+V++S+DR +RLGL G VDKLDY+LM+MDE++ ACE GFSPHVHLI+AW +L DRL C+R G V + EEHPPS++ L+IKHRIYMKPRV +D+F+Q+EDDMI+T+NHIL Y EE + L R R P + F+PGF+RVEP + GEWFEWEI+LSR + + GAGTY++L S+VLP +GNNQG WMAT+EQLK + + C YL + + S+ E SGS++MF P C KV
Sbjct: 324 ERAWRLKRGAELWRGTYVPPIEPTRRRELVYKWSYGKGPEEAAGATGG--------------------------ESGRILYVISSYDRRKRLGLGYDGKVDKLDYILMMMDEMKEACEGGFSPHVHLIAAWDTSEVADLIRDRLFCQRTGELVPYSSEEHPPSVRNNLAIKHRIYMKPRVEDFDVFMQVEDDMIVTLNHILLYREECDNLEKRLGMGGSRGRP-NVFVPGFLRVEPGGTKDKEKDKWEGEWFEWEIVLSRLNPIKIYGAGTYMSLSPSKVLPRAGNNQGMWMATREQLKKMAANQACNYLEFDESSANGIPEMHSGSIQMFLPECGFIKV 636
BLAST of mRNA_Ecto-sp13_S_contig203.6678.1 vs. uniprot
Match: A0A6H5K627_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K627_9PHAE) HSP 1 Score: 289 bits (739), Expect = 1.130e-82 Identity = 189/464 (40.73%), Postives = 242/464 (52.16%), Query Frame = 1
Query: 631 PPPGQGDMEGGEVAAFEPLP-------LEERLSRLETGVELWGATYVPPIAPEEVRRLTEKWTAVGAVSGAAXXXXXXXXXXXXXXTSTTATPDQVEAPSILFVVTSFDRGRRLGLRGKGVDKLDYVLMIMDEIRGACEAGFSPHVHLISAWKAQPELELFT-DRLLCRRIGGPVTLTLEEHPPSIKEALSIKHRIYMKPRVRAYDLFVQLEDDMILTVNHILTYLEESEKLSLRNIGTRPRAMPMHDFMPGFVRVEPEPGATGV------GGEWFEWEIILSRFRG----------------------------------------------------VHVVGAGTYLALEKSRVLPFSGNNQGFWMATQEQLKYLCR--QCQYLRYTDQSSVPFVEKFSGSLEMFSPPCHATKVFPAERFENLLVHHRTNNKNGKRGESTPAVSVSMLRLWAAQVVRDDEML 1818
PPP G +A PLP +EER+ R+E GV LWG T+VPP+ P L +KW+ + + +A ILFV+TSFDRGRRLG K DKLD++L++MDE+R ACEAGFSP+VHLI+AW+ E+E+F DRL CRR GG V +LE HP SI LSIKHRI+MKPR+ +DLF+Q+EDD+I+T+NH+L + EESE L R A + +PGF+RVE G G G EW EWE++LSR R V + AG YL L S LP G WMAT+EQL+ L C YL + D+SS VE SGSL+MF P C RF++ LVHHR NNK+G RGES P V +++LR W Q +RD++ L
Sbjct: 307 PPPPAG------IAGAGPLPTDGAAASVEERVHRMEEGVRLWGGTFVPPVEPTRRLELIDKWSGHAGRGRSKTSNSQEVSSFDYRSSDGGENSRGDDAGRILFVMTSFDRGRRLGPSFKK-DKLDFILLMMDEMREACEAGFSPNVHLIAAWELS-EVEVFVRDRLFCRRTGGHVPYSLEVHPSSIGNDLSIKHRIFMKPRLEEFDLFLQVEDDVIVTLNHMLLFREESELLDSRRHSDG--ATLANTAVPGFIRVEHAAGEEGTVVGPSSGEEWQEWEVMLSRRRSSLGEGIEEGIGSMNATRRMHHRRSLCFFSSTLNELFFLDSLGMNGVFTRLHPVKLEEAGIYLTLGPS--LP------GMWMATREQLRKLSETMSCDYLNF-DESSKGHVETHSGSLQMFKPNCG--------RFQSFLVHHRANNKHGVRGESVPGVPITLLRCWVEQFIRDEKFL 743
BLAST of mRNA_Ecto-sp13_S_contig203.6678.1 vs. uniprot
Match: A0A1Z5KKE3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKE3_FISSO) HSP 1 Score: 58.5 bits (140), Expect = 3.680e-5 Identity = 40/156 (25.64%), Postives = 77/156 (49.36%), Query Frame = 1
Query: 877 TATPDQVEAPSILFVVTS---FDRGRRLGLRGKGVDKLDYVLMIMDEIRGACEAGFSPHVHLISAWKAQPELELFTDRLLCRRIG-------GPVTLTLEEHPPSIKEA----LSIKHRIYMKPRVRAYDLFVQLEDDMILTVNHILTYLEESEKL 1302
TA+ Q + IL++VT+ ++ G R +G +L + ++ + IR +AG+ ++LI + PE E R L +G P+ ++P + L+ +HR +K ++ YD+FV EDDM++T H+ ++ +++L
Sbjct: 71 TASVTQPQGKRILYIVTALNEYNSGTRNTEKGSDRLQLTLIPVVSEGIRTMVDAGYHVDLYLICHFTLLPEREALVRRALPDSVGLEVWNDAAPLAYDTAQNPFTKLRYDILHLARQHRFVIKDKLLDYDVFVNFEDDMLITAEHVHHFIRVTDEL 226
BLAST of mRNA_Ecto-sp13_S_contig203.6678.1 vs. uniprot
Match: A0A7D5HWK7_9EURY (Uncharacterized protein n=1 Tax=Halarchaeum sp. CBA1220 TaxID=1853682 RepID=A0A7D5HWK7_9EURY) HSP 1 Score: 57.0 bits (136), Expect = 4.530e-5 Identity = 56/213 (26.29%), Postives = 91/213 (42.72%), Query Frame = 1
Query: 1126 PVTLTLEEHPPSIKEALSIKHRIYMKPRVRAYDLFVQLEDDMILTVNHILTYLEESEKLSLRNIGTRPRAMPMHDFMPGFVRVEPEPGATGVGGEWFEWEIILSRFRGVHVVGAGTYLALEKS----RVLPFSGNNQGFWMATQEQLKYLCRQCQYLRYTDQSSVPFVEKF----------SGSLEMFSPPCHATKVFPAERFENLLVHHRTN 1722
PV T +H PSI+ L +HR M+ + YDL+V +EDD+++T +++ Y+E +++L P +P GF+R E G + + H + T L R +QG W+ T +QL+ + + R S F + + SG+ ++++ K FP E FE LLVHH N
Sbjct: 49 PVVRT-RQHDPSIEMELVYEHRDVMRDALGEYDLYVYVEDDVLITEDNLDAYVEVNDRL--------PDGVPT-----GFIRFERVDGDE-------------TPYLFDHSLRQRTLLESNAEYGGERYFRLWNLHQGSWVLTDDQLRTVVAHDAFGREPGPSK-HFAKPYRLPQLYGILESGASDVYTNCGLDPKAFPIEGFERLLVHHLPN 233 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig203.6678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig203.6678.1 >prot_Ecto-sp13_S_contig203.6678.1 ID=prot_Ecto-sp13_S_contig203.6678.1|Name=mRNA_Ecto-sp13_S_contig203.6678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=399bp MEGGEVAAFEPLPLEERLSRLETGVELWGATYVPPIAPEEVRRLTEKWTAback to top mRNA from alignment at Ecto-sp13_S_contig203:164..7654+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig203.6678.1 ID=mRNA_Ecto-sp13_S_contig203.6678.1|Name=mRNA_Ecto-sp13_S_contig203.6678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7491bp|location=Sequence derived from alignment at Ecto-sp13_S_contig203:164..7654+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig203:164..7654+ >mRNA_Ecto-sp13_S_contig203.6678.1 ID=mRNA_Ecto-sp13_S_contig203.6678.1|Name=mRNA_Ecto-sp13_S_contig203.6678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1197bp|location=Sequence derived from alignment at Ecto-sp13_S_contig203:164..7654+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |