mRNA_Ecto-sp13_S_contig2028.6668.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig2028.6668.1
Unique NamemRNA_Ecto-sp13_S_contig2028.6668.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig2028.6668.1 vs. uniprot
Match: D7FHX8_ECTSI (PA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHX8_ECTSI)

HSP 1 Score: 884 bits (2285), Expect = 9.020e-316
Identity = 505/724 (69.75%), Postives = 522/724 (72.10%), Query Frame = 1 
Query:  340 MQRVVESKWQDAAQHQVGEDDVGKFITLRVRPGKQPGRVSQGHGIYSPMTREEAEQEQARWHLSLSTGPLPSGTVDVTLAAFGGEADSCTALPVVSAIPEDGCLPLLNAQQVKGAHVLVRRGRCSFLAKALAVSNSGGASLVVVDEGAGRLRMEAEEGQTVGIPVVMVSKLDGEALQKLAASTSRATGKVVATLVISAACLHRGGPAPSPRREKLSQLERGSRGLPILGASSLASGEEDKTPTADKAGPPAIEMAAGKTINNERGDASPSSVATPPGQGEAEAVDTLAATRADAQLITNRGGEENRGGREEVEEEGGRERLTLPECRQRSSGQLRGGDLTLHTTAREGQGGGGGETTITVEFLSTFVTSALAISPLN-SEESTTIPEMDGPGSGTTATVAILGGPCDDTRSPHEDDTTSPAVSKMKGTTVLLLPPDPACSVESQVRLGERLGAALLVVLNEDSDDVNIIAAVSSATVISAFAGGHDGSSNGSSALPPVPMLALGRPGEVDPHERSSDQSTHNDXXXXXXXXXXXXXGQLGGERRLPLGSERKSSSRAVDGCPPLTIVVAHDEGKRLLWWVLRVRGGGGDGSESGEGSFGGNGGGVVTVDMVERDEVGKLWGDVVWASDLTNWPKGSKQRRRILNRLRKTHSPEHVGRDEASSRTESATRWSLVERAYAALQGTDDAGDSTKPSRAYPGVDVDDTTEEDDARFNLNSIATFDIEL 2508
            MQRVVESKWQDAAQ QVGEDDVGKFITLRVRPGKQPGRVSQGHG+YSPMTREEAEQEQA WHLSLSTGPLPSGTVDVT+AAFGGEADSC ALPVVSAIPEDGCLPLLNAQQVKGAHVLVRRGRCSFLAKALAVSNSGGAS+VV DEGAGRLRMEAEEGQTVGIPVVMVSKLDGEALQKLAASTSRATGKV ATLVI+AACLHRG PAPSPRRE    LERGSR LPI GA + ASGEEDK PT DK GPPAIEMAAG+ INN+RGD SPS VATPPGQGEAE  DT AA RAD ++ITNRGGEE+RGG +EVEEEGG+ERLTLPECRQRSSGQLRGGDLT                                  PLN  EESTTIPEMD PGSGTTATVAILGGPCD+TRSPHED+TTSPAVSKMKGTTVLLLPPDPACS+ESQ                                                                                                                               EGK LL WVLRVRGGG DGS SGE SFGGNGGGVVTVDMVER E+GKLWGDVVWASDLTNWPKGSKQRRRILNRLRKTHSPEHVGRD ASSRTESATRWSLVERAYAALQ TDDAGDSTKPSRA+P VDVDDTTEEDDARFN N IATFD EL
Sbjct:    1 MQRVVESKWQDAAQRQVGEDDVGKFITLRVRPGKQPGRVSQGHGMYSPMTREEAEQEQAPWHLSLSTGPLPSGTVDVTVAAFGGEADSCAALPVVSAIPEDGCLPLLNAQQVKGAHVLVRRGRCSFLAKALAVSNSGGASVVVADEGAGRLRMEAEEGQTVGIPVVMVSKLDGEALQKLAASTSRATGKVTATLVINAACLHRGKPAPSPRREISPPLERGSRRLPIPGARNPASGEEDKAPTDDKRGPPAIEMAAGEKINNQRGDVSPSLVATPPGQGEAEVADTPAAARADVEVITNRGGEEDRGGGKEVEEEGGKERLTLPECRQRSSGQLRGGDLT----------------------------------PLNLEEESTTIPEMDSPGSGTTATVAILGGPCDNTRSPHEDETTSPAVSKMKGTTVLLLPPDPACSIESQ-------------------------------------------------------------------------------------------------------------------------------EGKHLLGWVLRVRGGG-DGSGSGERSFGGNGGGVVTVDMVERHELGKLWGDVVWASDLTNWPKGSKQRRRILNRLRKTHSPEHVGRDGASSRTESATRWSLVERAYAALQDTDDAGDSTKPSRAHPAVDVDDTTEEDDARFNSNIIATFDTEL 562
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BLAST of mRNA_Ecto-sp13_S_contig2028.6668.1 vs. uniprot
Match: A0A2V0NUC3_9CHLO (alpha-1,2-Mannosidase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NUC3_9CHLO)

HSP 1 Score: 72.0 bits (175), Expect = 4.470e-9
Identity = 47/100 (47.00%), Postives = 61/100 (61.00%), Query Frame = 1 
Query:  577 AAFGGEADSCTALPVVSAIPEDGCLPLLNAQQVKGAHVLVRRGRCSFLAKALAVSNSGGASLVVVD--EGAGRLRMEAE-EGQTVGIPVVMVSKLDGEAL 867
            AA  G A +  AL +    P DGC P  NA  ++GA  L  RG CSF+ KALA+  +G A++VVV+  EG G L M  +  G+  GIP V+VS+ DGEAL
Sbjct:  972 AAPCGRARALPALRLARPDPPDGCSPPRNAAALRGAIALAVRGGCSFVDKALALQEAGAAAVVVVNLFEGGGLLSMAGDGTGREPGIPAVVVSQRDGEAL 1071
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BLAST of mRNA_Ecto-sp13_S_contig2028.6668.1 vs. uniprot
Match: A0A520UZA2_9FLAO (T9SS type A sorting domain-containing protein n=3 Tax=Flavobacteriales TaxID=200644 RepID=A0A520UZA2_9FLAO)

HSP 1 Score: 61.2 bits (147), Expect = 4.900e-6
Identity = 46/124 (37.10%), Postives = 64/124 (51.61%), Query Frame = 1 
Query:  529 SLSTGPLPSGTVDVTLAAFGGEADSCTALPVVSAI---------PEDGCLPLLNAQQVKGAHVLVRRGRCSFLAKALAVSNSGGASLVVVD--EGAGRLRMEAEEGQTVGIPVVMVSKLDGEAL 867
            S++ GPL  G   +  A FGG A + TAL   + +           D C PL N   + G   +VRRG C F  KAL   N+G  +++VV+  EG   +     +G +V IPV+MVS L GEA+
Sbjct:  135 SVNNGPLEGGHQAIP-AQFGG-AFTTTALTEDAVLVTDESSDPDENDACEPLTNGPDLAGKVAVVRRGACEFGFKALQAQNAGAVAVIVVNNVEGPPIIMAGGADGDSVTIPVLMVSDLVGEAI 256
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BLAST of mRNA_Ecto-sp13_S_contig2028.6668.1 vs. uniprot
Match: A0A2E3QTW5_9BACT (Metalloprotease n=3 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A2E3QTW5_9BACT)

HSP 1 Score: 61.6 bits (148), Expect = 6.730e-6
Identity = 46/129 (35.66%), Postives = 64/129 (49.61%), Query Frame = 1 
Query:  517 RWHLSLSTGPLPSG------TVDVTLAAFGGE--ADSCTALPVV----SAIPEDGCLPLLNAQQVKGAHVLVRRGRCSFLAKALAVSNSGGASLVVVDEGAGRLRMEAEEGQTVGIPVVMVSKLDGEAL 867
            R  + + T PLP+       TV +T AAFG +      TA  V+    +A+P +GC PL+N  QV G   +V RG C+F  K     ++G   +VVV+   G          TV IP  MVS ++G AL
Sbjct:  527 RMQMYVWTNPLPNELTYNGQTVVMTGAAFGPKFPLSGLTAAGVLVTDGTALPNEGCNPLVNGAQVAGKVAIVYRGSCAFTIKVKNAQDAGAVGVVVVNNAGGNPGTLGGADATVTIPAGMVSDVNGAAL 655
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BLAST of mRNA_Ecto-sp13_S_contig2028.6668.1 vs. uniprot
Match: A0A6H9HYH6_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6H9HYH6_9PROT)

HSP 1 Score: 58.9 bits (141), Expect = 4.480e-5
Identity = 49/128 (38.28%), Postives = 63/128 (49.22%), Query Frame = 1 
Query:  517 RWHLSLSTGPLPSGTVDVTL--AAFGGEADSCTALPVVSAIPEDG------CLPLLNAQQVKGAHVLVRRGRCSFLAKALAVSNSGGASLVVV--DEGAGR-LRMEAEEGQTVGIPVVMVSKLDGEAL 867
            R+   L   P  SGT D+T+  AAF  E  S  A      +  DG      C    NA  +KG   LVRRG C FL K     ++G  ++VV   +E  G  + M  E G  VG+P VM+S+ DGEAL
Sbjct:  417 RYDEVLRVTPAASGTGDITMKEAAFTPELRSTGARSGSLVLVTDGQGGANGCTFPANAADLKGHVALVRRGACDFLTKVANAGDAGAIAVVVFGNEENDGLPITMTGERG-VVGVPAVMISQADGEAL 543
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig2028.6668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FHX8_ECTSI9.020e-31669.75PA domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A2V0NUC3_9CHLO4.470e-947.00alpha-1,2-Mannosidase n=1 Tax=Raphidocelis subcapi... [more]
A0A520UZA2_9FLAO4.900e-637.10T9SS type A sorting domain-containing protein n=3 ... [more]
A0A2E3QTW5_9BACT6.730e-635.66Metalloprotease n=3 Tax=Bacteroidetes/Chlorobi gro... [more]
A0A6H9HYH6_9PROT4.480e-538.28Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig2028contigEcto-sp13_S_contig2028:481..5392 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeBacteria
Stop1
Start1
Seed ortholog score63.5
Seed ortholog evalue4.5e-07
Seed eggNOG ortholog1122225.AULQ01000005_gene2523
Model size2559
KEGG rclassRC00049,RC00452
KEGG koko:K01179,ko:K01190,ko:K01337,ko:K01387,ko:K12308,ko:K20276
KEGG ReactionR01105,R01678,R03355,R04783,R06114,R06200,R11307,R11308
KEGG Pathwayko00052,ko00500,ko00511,ko00600,ko01100,ko02024,map00052,map00500,map00511,map00600,map01100,map02024
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005576
Exons7
EggNOG free text desc.cellulase activity
EggNOG OGs1HYZP@117743,4NEJ8@976,COG1874@1,COG1874@2,COG3291@1,COG3291@2,COG3391@1,COG3391@2,COG4412@1,COG4412@2,COG4447@1,COG4447@2
Ec32 ortholog descriptionProtease-associated domain, PA
Ec32 orthologEc-12_006290.1
EC3.2.1.23,3.2.1.4,3.4.21.50,3.4.24.3
Cds size2172
COG Functional cat.O
CAZyGH5,GH9
Best tax levelFlavobacteriia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko02042
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig2028.6668.1prot_Ecto-sp13_S_contig2028.6668.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig2028 529..5053 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463018.4869115-UTR-Ecto-sp13_S_contig2028:480..5281681463018.4869115-UTR-Ecto-sp13_S_contig2028:480..528Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig2028 481..528 -
1681463018.559-UTR-Ecto-sp13_S_contig2028:5053..53921681463018.559-UTR-Ecto-sp13_S_contig2028:5053..5392Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig2028 5054..5392 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463018.5023892-CDS-Ecto-sp13_S_contig2028:528..8001681463018.5023892-CDS-Ecto-sp13_S_contig2028:528..800Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig2028 529..800 -
1681463018.5106816-CDS-Ecto-sp13_S_contig2028:1237..18981681463018.5106816-CDS-Ecto-sp13_S_contig2028:1237..1898Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig2028 1238..1898 -
1681463018.5189085-CDS-Ecto-sp13_S_contig2028:2422..26421681463018.5189085-CDS-Ecto-sp13_S_contig2028:2422..2642Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig2028 2423..2642 -
1681463018.5270007-CDS-Ecto-sp13_S_contig2028:3065..35671681463018.5270007-CDS-Ecto-sp13_S_contig2028:3065..3567Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig2028 3066..3567 -
1681463018.5350435-CDS-Ecto-sp13_S_contig2028:3939..41231681463018.5350435-CDS-Ecto-sp13_S_contig2028:3939..4123Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig2028 3940..4123 -
1681463018.5430934-CDS-Ecto-sp13_S_contig2028:4475..46401681463018.5430934-CDS-Ecto-sp13_S_contig2028:4475..4640Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig2028 4476..4640 -
1681463018.5511744-CDS-Ecto-sp13_S_contig2028:4885..50531681463018.5511744-CDS-Ecto-sp13_S_contig2028:4885..5053Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig2028 4886..5053 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig2028.6668.1

>prot_Ecto-sp13_S_contig2028.6668.1 ID=prot_Ecto-sp13_S_contig2028.6668.1|Name=mRNA_Ecto-sp13_S_contig2028.6668.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=724bp
MQRVVESKWQDAAQHQVGEDDVGKFITLRVRPGKQPGRVSQGHGIYSPMT
REEAEQEQARWHLSLSTGPLPSGTVDVTLAAFGGEADSCTALPVVSAIPE
DGCLPLLNAQQVKGAHVLVRRGRCSFLAKALAVSNSGGASLVVVDEGAGR
LRMEAEEGQTVGIPVVMVSKLDGEALQKLAASTSRATGKVVATLVISAAC
LHRGGPAPSPRREKLSQLERGSRGLPILGASSLASGEEDKTPTADKAGPP
AIEMAAGKTINNERGDASPSSVATPPGQGEAEAVDTLAATRADAQLITNR
GGEENRGGREEVEEEGGRERLTLPECRQRSSGQLRGGDLTLHTTAREGQG
GGGGETTITVEFLSTFVTSALAISPLNSEESTTIPEMDGPGSGTTATVAI
LGGPCDDTRSPHEDDTTSPAVSKMKGTTVLLLPPDPACSVESQVRLGERL
GAALLVVLNEDSDDVNIIAAVSSATVISAFAGGHDGSSNGSSALPPVPML
ALGRPGEVDPHERSSDQSTHNDSSSSSSSSSSSSAGQLGGERRLPLGSER
KSSSRAVDGCPPLTIVVAHDEGKRLLWWVLRVRGGGGDGSESGEGSFGGN
GGGVVTVDMVERDEVGKLWGDVVWASDLTNWPKGSKQRRRILNRLRKTHS
PEHVGRDEASSRTESATRWSLVERAYAALQGTDDAGDSTKPSRAYPGVDV
DDTTEEDDARFNLNSIATFDIEL*
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mRNA from alignment at Ecto-sp13_S_contig2028:481..5392-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig2028.6668.1 ID=mRNA_Ecto-sp13_S_contig2028.6668.1|Name=mRNA_Ecto-sp13_S_contig2028.6668.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4912bp|location=Sequence derived from alignment at Ecto-sp13_S_contig2028:481..5392- (Ectocarpus species13 EcNAP12_S_4_19m)
CTCTCGAGGGACAGAATGTGTCCAACGTGGGTGCAGTAAAGAGACTAGAA
CCGTGGTGTGAGAGGACACGGGGTTGGAGAGAGGATTCCCTTATCGAGTT
GTTGCACGATGTCTCTCCATCCCAAATGAACGACGTAAAAGGCTTCTTCA
CGGACTACACACCGATAGTTCCAAATAGCCCATGTTGAGTGTGGCCTCAT
GTGAGCTCAACAAGGTCACCCGGTTTTTCCTCTAAAATGGCAGTTTATTC
CGCCTGCCGAATATGACCGGATCTCGAACGTGCCTCCGCGTACGCGATGC
GTACCGCTGTAGTTCAGTCCCGGGGAATTCGCAGGTGCCATGCAGAGAGT
CGTGGAGTCGAAGTGGCAGGATGCCGCCCAGCACCAGGTCGGCGAGGACG
ACGTCGGGAAATTCATCACACTAAGAGTTCGACCGGGCAAACAACCGGGG
CGTGTATCCCAGGGACACGGCATATATTCACCAATGACCAGGGAAGAAGC
TGAGCAGGTTAGTTCGACTTTGGGGCGTGTTGGGGAGCTCGACCGAGGCG
ATACGCGGATGTCGTCTGGCTCACCTTGAAACATCGTCCGGTATTGGCGA
AGGTTCTGTGCGCGTTGGAATCAAAGAGTCGCCTCCTGTGCGATTCGGCT
GTCCCTAGGTGTCGTGTGAACTCTTACTACACACCCCTGTTGCCTCTCGC
CTGCTGGAAGTGCCCTCACTCTCACCCTTCGCGACCGATACACCCTCGGC
AGGAGCAGGCACGGTGGCACCTATCCTTGTCCACAGGCCCCCTGCCCTCA
GGAACGGTGGACGTGACGCTGGCGGCCTTCGGTGGCGAGGCTGACAGCTG
TACCGCTCTCCCTGTTGTTTCGGCGATCCCAGAGGATGGCTGCTTGCCTC
TCCTCAACGCGCAACAGGTGTGTGGGGAATGAATACTCGGCGAAACTTCT
ATCTTATTAGGATCGAGTGTGACCTGCAAGAGAGCGCCACAGTGTGCGGC
ACCGCCGCTGACCACGACGATGGCGACGGTGACCACAAGCACCACATGAT
CAAGCTCACCTTGGGCCTTACGATCAGTCCCCGAAACAGTGCTTGGGGCA
CCGGAAAACCTGTGTGGACGCAGACGCGAGACGATCGTGCAGGAATGATC
AGAAGAGGTTCGATCTCTTGGAATAATGGATGCCTTCTTCGACAAAAATC
CCTAGACGGTGTAGTGTTGCTTATTCTTCCGTGCCCATGTTGTTCGTTTT
GTGGCGTGCGTGTATTAAGGTAAAAGGTGCGCACGTCCTCGTCCGTCGGG
GACGCTGCAGCTTTCTTGCGAAAGCGCTCGCAGTCAGCAACTCTGGCGGG
GCCAGCCTGGTTGTGGTCGACGAAGGAGCCGGGCGCTTGAGGATGGAGGC
AGAAGAGGGACAAACTGTCGGCATTCCCGTCGTGATGGTGTCGAAACTGG
ATGGTAAGCTTTCGGCAACCTGTAGGACCCCGAGGTGATGGCGTTACACG
AAACGAGAGTAGGCGTATCGACTTTGTGTCGGCCGAAAGTGTGGGGCACA
AGCCTGCACCCGATGTGTTTCCCTCCCATCGAGGACTTCTGGCTGTGCCG
ATGGTGTGACTCTTTTTGGTGATTGCGGCGGTAAAGGGGTAGCACAAGCG
CTTCGCTCAATGGGACACTACCACCCACGCACTTTCCTTCTCGGTCACCA
TTCATTACCCTCGAACTGGCTGCGCGGCTTGGTGTACCAAAACGGAAGCC
CAGGCTTAGTGTGCCAAAACGAATGCACACACGTAACCCCTCAGTTTCAC
TACATCCCGCCTGTCTTGGCCGCAGGGGAGGCCTTGCAAAAACTGGCGGC
CTCGACCTCCCGCGCCACAGGAAAGGTCGTCGCAACGCTCGTCATAAGCG
CGGCCTGTCTCCATCGCGGCGGACCAGCGCCGTCACCTCGAAGAGAAAAA
CTCTCTCAACTGGAGCGGGGTAGTCGGGGGCTGCCTATCCTTGGGGCCAG
TAGTCTCGCCTCGGGCGAAGAAGACAAGACACCTACCGCGGATAAAGCAG
GGCCGCCAGCGATCGAAATGGCGGCGGGGAAGACAATTAACAACGAGAGG
GGAGATGCTTCGCCATCGTCGGTTGCGACACCCCCAGGCCAAGGGGAGGC
GGAGGCTGTTGACACGCTAGCAGCTACCAGGGCCGACGCCCAGTTGATCA
CAAACAGAGGCGGCGAAGAAAATCGGGGAGGGCGGGAGGAAGTGGAGGAA
GAGGGAGGGAGGGAACGTTTGACGCTGCCAGAATGTCGGCAGAGAAGCTC
AGGCCAGCTCCGCGGCGGCGACTTAACGTGAGGATGCTCGACCGAAGGAT
CCCTTTCGAACGGCGTAGGGTACTATTTATTGACCCTCTTGAAGGAGCAC
GCCAGGAAGATGCCGCCACCTGTGTTTGAAGTTATCGACGGTCCGGAGGC
ATCGTAGTCACACTCGCGTCGCAGTTCTTGTCGCTGGTCGGAGGAGGGCG
TCTGGCGTAGTTGTGTTCAACCCCTGGGTGTGAAAAGGATGGTCTGAAGT
TCATAGTCGGGAGGGGATGTATCGATACCCCTCAAAGAGAGGTAAATCGA
CGGCGGCCGGCTTTCTTCACACTCTATTCTTTCGAGTCGTGTGCGCGTCC
TTGAGTTATCGGACGACTCGCTGGGCTGAAACCGACGAGTTCTTGAGCAT
CGTCTTCACTATCCCCCCTGTTCTTCCTTATCATTCCTTCGGTCACGAAG
ACTACACACCACCGCCAGGGAAGGACAAGGAGGGGGAGGAGGAGAAACAA
CAATTACAGTGGAATTCTTGTCCACGTTTGTCACCAGCGCGCTCGCAATC
AGCCCTTTGAACTCGGAGGAGTCGACGACCATCCCCGAAATGGATGGTCC
AGGCAGTGGCACGACCGCGACCGTCGCCATCCTCGGCGGCCCCTGCGACG
ACACACGTTCACCGCACGAGGTATGACAGTTCGGAGTACGTAGGGAACAA
GCTGTAATACTCTCAAGAGATGCTGAAATACTCTCAAGAGACGCTTACTA
CTTTCGTCCGTCCTCGCTCCCTTGTTTCTCTTACATGTGTTGTGGTGGTC
AACTTTCTCTAGAATTTTGTCGTCAGAACGGTGTGGATGTAGTCAGTGAT
GCTTGAGTCGTTCTGGTGCTTCCGACTATGACTTCTCTCCCCCTTCGAGA
AACCCGAAAACGACACACACACACAATGGTTATCGTCGTTGCAGCTGCAC
ACAAAGTTTCTCTCTCATGTATCCCGCCAATTGTAGAGTTTTTCGGCCTG
TAACTGTCTTGGTGTTGGCATGAACTCGTAGGTTCCGACCCTGTAGCAAC
GTATGGCACCGCATCCGAGGTACATACTCCACACTAGCTGTCGCTTTGTG
TGCATGTGCCCGATGGGCTGCGGAAAAAAATGCACCAACCCTCGTGGCAT
GACGACGTTCTCCCACACGTGTACCTCATCTGGGATCCGAGAAGGACGAC
ACAACGTCGCCAGCGGTGTCGAAGATGAAGGGCACAACGGTTCTGCTTCT
CCCGCCAGACCCGGCCTGCTCAGTCGAGAGCCAGGTCAGGCTCGGGGAGC
GACTCGGCGCCGCGCTTCTGGTCGTCCTCAATGAGGATTCCGACGACGTC
AACATCATCGCCGCCGTATCTTCAGCGACAGTGATCAGCGCGTTCGCTGG
CGGTCACGACGGCAGCAGCAACGGTTCGTCGGCGTTGCCACCGGTGCCGA
TGCTGGCGCTCGGTCGACCTGGAGAGGTAGACCCCCACGAAAGAAGCAGC
GACCAATCAACGCACAACGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
TAGTAGTGCCGGCCAGTTAGGTGGTGAACGGCGATTGCCGTTGGGGAGCG
AACGAAAATCGTCCTCCAGAGCGGTAGACGGCTGCCCTCCGCTGACGATC
GTCGTAGCCCACGATGAAGGCAAGCGCTTGTTGTGGTGGGTGCTCCGAGT
CCGCGGTGGTGGTGGGGATGGCAGCGAGAGCGGGGAAGGCAGTTTTGGTG
GTAACGGGGGGGGCGTGGTCACGGTGGATATGGTGGAGCGAGATGAAGTG
GGGAAGCTGTGGGGAGATGTGGTTTGGGCCTCGGACCTCACGAACTGGCC
CAAAGGTAAGAAAGGGTGTTGTCCAGCGTGTGGTTGTGTTCTTCGTCGCC
GCGTCGCCCCAGTGTATTAGGACGCATTGGAAATTGCACGGTATGGTGTT
ACTGTATGATGTCGCCCACCGTGATTCAATACTAGACTATATGCAAGGAG
ACCGTGTTCGATCCGGCGGGCGAGTATATCTTCATCACGGGATAAATCCT
ACGGTCAAGAGACGATTGTGATGAAATAGCTGGGCAGATGGAGATTGACT
TGTCTCGTCAAATACGATGTGCGCAACAGTGCCAATGCCGGCTACCTGAC
CAACGGGGATGACAGCGGAACACCGGGGGCTACGGACTGCAATGCAACCG
AAACACTGTCCCATTAACCCTCCCCCCCCCCCCCCTTTATCGCTCACTTG
CACAACGAAAAATGTATCCGACGAAAACAACGACCTACCAAGGGTCCAAG
CAGCGACGGCGGATCCTCAACCGGCTGCGAAAGACGCACAGCCCCGAGCA
CGTTGGCAGGGACGAAGCGTCATCTAGGACAGAGAGCGCGACCCGCTGGT
CCCTGGTGGAACGCGCGTACGCCGCCTTGCAGGGCACCGATGATGCGGGC
GATTCGACCAAACCGTCGAGGGCGTACCCTGGGGTTGACGTTGATGACAC
CACGGAGGAAGACGATGCTCGATTCAACTTAAATAGCATCGCGACGTTTG
ACATAGAGCTGTAGGGCCTGCGCTCAGTGGAAAGACAAAGTCTCCAGAGT
GTTTTATACGAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig2028:481..5392-

>mRNA_Ecto-sp13_S_contig2028.6668.1 ID=mRNA_Ecto-sp13_S_contig2028.6668.1|Name=mRNA_Ecto-sp13_S_contig2028.6668.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2172bp|location=Sequence derived from alignment at Ecto-sp13_S_contig2028:481..5392- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGAGAGTCGTGGAGTCGAAGTGGCAGGATGCCGCCCAGCACCAGGT
CGGCGAGGACGACGTCGGGAAATTCATCACACTAAGAGTTCGACCGGGCA
AACAACCGGGGCGTGTATCCCAGGGACACGGCATATATTCACCAATGACC
AGGGAAGAAGCTGAGCAGGAGCAGGCACGGTGGCACCTATCCTTGTCCAC
AGGCCCCCTGCCCTCAGGAACGGTGGACGTGACGCTGGCGGCCTTCGGTG
GCGAGGCTGACAGCTGTACCGCTCTCCCTGTTGTTTCGGCGATCCCAGAG
GATGGCTGCTTGCCTCTCCTCAACGCGCAACAGGTAAAAGGTGCGCACGT
CCTCGTCCGTCGGGGACGCTGCAGCTTTCTTGCGAAAGCGCTCGCAGTCA
GCAACTCTGGCGGGGCCAGCCTGGTTGTGGTCGACGAAGGAGCCGGGCGC
TTGAGGATGGAGGCAGAAGAGGGACAAACTGTCGGCATTCCCGTCGTGAT
GGTGTCGAAACTGGATGGGGAGGCCTTGCAAAAACTGGCGGCCTCGACCT
CCCGCGCCACAGGAAAGGTCGTCGCAACGCTCGTCATAAGCGCGGCCTGT
CTCCATCGCGGCGGACCAGCGCCGTCACCTCGAAGAGAAAAACTCTCTCA
ACTGGAGCGGGGTAGTCGGGGGCTGCCTATCCTTGGGGCCAGTAGTCTCG
CCTCGGGCGAAGAAGACAAGACACCTACCGCGGATAAAGCAGGGCCGCCA
GCGATCGAAATGGCGGCGGGGAAGACAATTAACAACGAGAGGGGAGATGC
TTCGCCATCGTCGGTTGCGACACCCCCAGGCCAAGGGGAGGCGGAGGCTG
TTGACACGCTAGCAGCTACCAGGGCCGACGCCCAGTTGATCACAAACAGA
GGCGGCGAAGAAAATCGGGGAGGGCGGGAGGAAGTGGAGGAAGAGGGAGG
GAGGGAACGTTTGACGCTGCCAGAATGTCGGCAGAGAAGCTCAGGCCAGC
TCCGCGGCGGCGACTTAACACTACACACCACCGCCAGGGAAGGACAAGGA
GGGGGAGGAGGAGAAACAACAATTACAGTGGAATTCTTGTCCACGTTTGT
CACCAGCGCGCTCGCAATCAGCCCTTTGAACTCGGAGGAGTCGACGACCA
TCCCCGAAATGGATGGTCCAGGCAGTGGCACGACCGCGACCGTCGCCATC
CTCGGCGGCCCCTGCGACGACACACGTTCACCGCACGAGGACGACACAAC
GTCGCCAGCGGTGTCGAAGATGAAGGGCACAACGGTTCTGCTTCTCCCGC
CAGACCCGGCCTGCTCAGTCGAGAGCCAGGTCAGGCTCGGGGAGCGACTC
GGCGCCGCGCTTCTGGTCGTCCTCAATGAGGATTCCGACGACGTCAACAT
CATCGCCGCCGTATCTTCAGCGACAGTGATCAGCGCGTTCGCTGGCGGTC
ACGACGGCAGCAGCAACGGTTCGTCGGCGTTGCCACCGGTGCCGATGCTG
GCGCTCGGTCGACCTGGAGAGGTAGACCCCCACGAAAGAAGCAGCGACCA
ATCAACGCACAACGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGTA
GTGCCGGCCAGTTAGGTGGTGAACGGCGATTGCCGTTGGGGAGCGAACGA
AAATCGTCCTCCAGAGCGGTAGACGGCTGCCCTCCGCTGACGATCGTCGT
AGCCCACGATGAAGGCAAGCGCTTGTTGTGGTGGGTGCTCCGAGTCCGCG
GTGGTGGTGGGGATGGCAGCGAGAGCGGGGAAGGCAGTTTTGGTGGTAAC
GGGGGGGGCGTGGTCACGGTGGATATGGTGGAGCGAGATGAAGTGGGGAA
GCTGTGGGGAGATGTGGTTTGGGCCTCGGACCTCACGAACTGGCCCAAAG
GGTCCAAGCAGCGACGGCGGATCCTCAACCGGCTGCGAAAGACGCACAGC
CCCGAGCACGTTGGCAGGGACGAAGCGTCATCTAGGACAGAGAGCGCGAC
CCGCTGGTCCCTGGTGGAACGCGCGTACGCCGCCTTGCAGGGCACCGATG
ATGCGGGCGATTCGACCAAACCGTCGAGGGCGTACCCTGGGGTTGACGTT
GATGACACCACGGAGGAAGACGATGCTCGATTCAACTTAAATAGCATCGC
GACGTTTGACATAGAGCTGTAG
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