mRNA_Ecto-sp13_S_contig20272.6663.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20272.6663.1 vs. uniprot
Match: D7G2Y9_ECTSI (Carboxyl-terminal protease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y9_ECTSI) HSP 1 Score: 317 bits (813), Expect = 1.520e-105 Identity = 168/174 (96.55%), Postives = 170/174 (97.70%), Query Frame = 1
Query: 1 KVLKQVQDRRGKEEAYSAVKGMLKGLGDPYTRFLTPQEYDAVTGLARGGVAGVGLELASSPASSGNPLSVIVAGVVDGSPAEKAGVLTGDVLSAVDGDEASGADLDAVAGMLRGDPGSGVRLDVRRGGKAFAFPLTRAQFKYQGVRSEVRSSGGQKVGIVSIKVFSKDTFEDVR 522
KVLKQVQDRRGKEEAYSAVKGMLKGLGDPYTRFLTPQEYDAVTGLARGGVAGVGLELASSPASSGNPLSVIVAGVV GSPAEKAGVLTGDVLSAVDG+EASG DLD VAGMLRGDPGSGVRLDVRRGGK FAFPLTRAQFKYQGVRSEVRS+GGQKVGIVSIKVFSKDTFEDVR
Sbjct: 87 KVLKQVQDRRGKEEAYSAVKGMLKGLGDPYTRFLTPQEYDAVTGLARGGVAGVGLELASSPASSGNPLSVIVAGVVGGSPAEKAGVLTGDVLSAVDGEEASGTDLDTVAGMLRGDPGSGVRLDVRRGGKTFAFPLTRAQFKYQGVRSEVRSNGGQKVGIVSIKVFSKDTFEDVR 260
BLAST of mRNA_Ecto-sp13_S_contig20272.6663.1 vs. uniprot
Match: A0A6H5L405_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L405_9PHAE) HSP 1 Score: 177 bits (450), Expect = 1.140e-52 Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 1
Query: 1 KVLKQVQDRRGKEEAYSAVKGMLKGLGDPYTRFLTPQEYDAVTGLARGGVAGVGLELASSPASSGNPLSVIVAGVVDGSPAEKAGVLTGDVLSAVDGDE 297
KVLKQVQDRRGKEEAY+A KGMLKGLGDPYTRFLTPQEYDAVTGLARGGVAGVGLELASSPASSGNPLSVIVAGVVDGSPA KAGVLTGDVLSAVDG+E
Sbjct: 164 KVLKQVQDRRGKEEAYAAAKGMLKGLGDPYTRFLTPQEYDAVTGLARGGVAGVGLELASSPASSGNPLSVIVAGVVDGSPAAKAGVLTGDVLSAVDGEE 262
BLAST of mRNA_Ecto-sp13_S_contig20272.6663.1 vs. uniprot
Match: A0A6H5L348_9PHAE (TSPc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L348_9PHAE) HSP 1 Score: 125 bits (314), Expect = 1.060e-32 Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 1
Query: 331 MLRGDPGSGVRLDVRRGGKAFAFPLTRAQFKYQGVRSEVRSSGGQKVGIVSIKVFSKDTFEDVR 522
MLRGDPGSGVRLDVRRGGKAFAF LTRAQFKYQGVRSEVRSSGGQKVGIVSIKVFSKDTFEDVR
Sbjct: 1 MLRGDPGSGVRLDVRRGGKAFAFLLTRAQFKYQGVRSEVRSSGGQKVGIVSIKVFSKDTFEDVR 64
BLAST of mRNA_Ecto-sp13_S_contig20272.6663.1 vs. uniprot
Match: A0A2T1GBN8_9CYAN (Peptidase S41 n=2 Tax=Chamaesiphon TaxID=217161 RepID=A0A2T1GBN8_9CYAN) HSP 1 Score: 115 bits (289), Expect = 2.510e-27 Identity = 63/166 (37.95%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 28 RGKEEAYSAVKGMLKGLGDPYTRFLTPQEYDAVTGLARGGVAGVGLELASSPASSGNPLSVIVAGVVDGSPAEKAGVLTGDVLSAVDGDEASGADLDAVAGMLRGDPGSGVRLDVRRGGKA-FAFPLTRAQFKYQGVRSEVRSSGGQKVGIVSIKVFSKDTFEDVR 522
R ++EAY A++ LK LGDPYTRF+ PQ++ ++ G ++GVG++L ++P + ++VA ++ SPA KAG+ GD + A+DG L+ G++RG+ G V L + RG + F PLTRAQ + V SEV+ G KVG + + FS + E ++
Sbjct: 84 RNRQEAYVAIRTTLKKLGDPYTRFMDPQQFQSLNNQTSGEMSGVGIKLEANPRTK----QLVVAEAIENSPAAKAGIKAGDAIVAIDGKSTKNMTLENAIGLIRGEIGKSVTLKIARGSSSPFDVPLTRAQIEVASVFSEVKQEGKLKVGYIRLSEFSSHSSEQMQ 245
BLAST of mRNA_Ecto-sp13_S_contig20272.6663.1 vs. uniprot
Match: A0A7S0LFN1_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LFN1_9EUKA) HSP 1 Score: 115 bits (287), Expect = 4.570e-27 Identity = 72/164 (43.90%), Postives = 98/164 (59.76%), Query Frame = 1
Query: 40 EAYSAVKGMLKGLGDPYTRFLTPQEYDAVTGLARGGVAGVGLELASSPAS-SGNPLSVIVAGVVDGSPAEKAGVLTGDVLSAVDGDEASGADLDAVAGMLRGDPGSGVRLDVRRGG--KAFAFPLTRAQFKYQGVRSEVRSSGGQKVGIVSIKVFSKDTFEDVR 522
+AY+ ++ ML LGD YTRFLTP YDA+ A G VAG+G+EL + A+ G +V++ VV PA+++GVLTGDV+ VD +E G + VA +RG GS +RL + R G + + RA K V S++ + GQK GIV IK FS T DVR
Sbjct: 112 DAYAEIRTMLSSLGDKYTRFLTPPMYDALFSQATGDVAGIGVELMTQEATVPGGKTAVLINSVVPEGPADRSGVLTGDVVVDVDSNEVGGLSAEEVAARVRGPAGSKLRLVLEREGSDEPSIKLIERAAVKLDAVTSQLSTISGQKTGIVRIKAFSTATAADVR 275
BLAST of mRNA_Ecto-sp13_S_contig20272.6663.1 vs. uniprot
Match: A0A7S1YKD9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YKD9_9STRA) HSP 1 Score: 115 bits (289), Expect = 4.750e-27 Identity = 68/166 (40.96%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 37 EEAYSAVKGMLKGLGDPYTRFLTPQEYDAVTGLARGGVAGVGLELASSPASSGNPLSVIVAGVVDGSPAEKAGVLTGDVLSAVDGDEASGADLDAVAGMLRGDPGSGVRLDVRRGGKAFAFPLT--RAQFKYQGVRSEVRS---SGGQKVGIVSIKVFSKDTFEDV 519
E+ Y ++ ML L DPYTRFLTP +Y+++T A+GG AG+G+ L + P+S V+VA V+G PAEKAGV GDV+ VDG + + + + VA RG+ G+ + + +R G PLT RAQ K V++ + S +G KVG + I FS++T V
Sbjct: 191 EKVYDIIRTMLSALNDPYTRFLTPDQYESLTAYAKGGSAGIGVSLIADPSSG----QVVVANTVEGGPAEKAGVQAGDVIVEVDGMDVTSSSAEVVAAKCRGEVGANLNIAIRPQGGKKVVPLTITRAQVKVNPVQASMISLNNNGNSKVGYIRISGFSQETTSQV 352
BLAST of mRNA_Ecto-sp13_S_contig20272.6663.1 vs. uniprot
Match: A0A4D9CRG9_9STRA (PDZ domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRG9_9STRA) HSP 1 Score: 113 bits (283), Expect = 2.850e-26 Identity = 69/161 (42.86%), Postives = 96/161 (59.63%), Query Frame = 1
Query: 40 EAYSAVKGMLKGLGDPYTRFLTPQEYDAVTGLARGGVAGVGLELASSPASSGNPLSVIVAGVVDGSPAEKAGVLTGDVLSAVDGDEASGADLDAVAGMLRGDPGSGVRLDVR-RGGKAFAFPLTRAQFKYQGVRSEVRSSGGQKVGIVSIKVFSKDTFEDV 519
+ Y +K ML+ LGDPYTRFL P +YD++ GLA G VAGVG+ L PA+ + A V GSPAE AG+ GD L VDG +G +D A +LRG G+ V + R +GG++ +TR K Q V + + GG+KVG++ I+ FS+ T + V
Sbjct: 176 QVYEGIKAMLEPLGDPYTRFLPPSQYDSLFGLATGSVAGVGVSLQIDPATQ----ELTAAEVEKGSPAEAAGLRAGDKLLYVDGQATTGLLVDDCANLLRGPAGTKVGVVARGKGGESKDVIITRQLIKIQSVEALTANKGGKKVGVIRIRSFSQTTADTV 332
BLAST of mRNA_Ecto-sp13_S_contig20272.6663.1 vs. uniprot
Match: UPI0019C1241B (S41 family peptidase n=1 Tax=Gloeobacterales cyanobacterium ES-bin-141 TaxID=2812628 RepID=UPI0019C1241B) HSP 1 Score: 111 bits (278), Expect = 7.920e-26 Identity = 70/174 (40.23%), Postives = 105/174 (60.34%), Query Frame = 1
Query: 10 KQVQDRR--GKEEAYSAVKGMLKGLGDPYTRFLTPQEYDAVTGLARGGVAGVGLELASSPASSGNPLSVIVAGVVDGSPAEKAGVLTGDVLSAVDGDEASGADLDAVAGMLRGDPGSGVRLDVRRGGKA-FAFPLTRAQFKYQGVRSEVRSSGGQKVGIVSIKVFSKDTFEDVR 522
KQ+ +R KE+AY A++ LK LGDPYTRFL P+E+ A+ G + GVGL L +SP N L VI++ + GSPA +AGV D L AVD +G LD V+ ++RGD G+ V L V RG K +F +TRA + V++ ++ G+K+G + ++ FS+ +++
Sbjct: 76 KQLLEREYASKEDAYKAIRAALKELGDPYTRFLDPREFQALKDQTSGELVGVGLTLGASPT---NKLPVIMS-TLKGSPATRAGVQAKDQLVAVDDKPTTGVPLDKVSSLIRGDSGTKVTLTVLRGDKQKLSFTITRAPIELPAVQAVLKEEDGKKLGYIQLQEFSEKATPEMK 245
BLAST of mRNA_Ecto-sp13_S_contig20272.6663.1 vs. uniprot
Match: P73458_SYNY3 (Carboxyl-terminal protease n=8 Tax=Bacteria TaxID=2 RepID=P73458_SYNY3) HSP 1 Score: 110 bits (276), Expect = 1.460e-25 Identity = 56/168 (33.33%), Postives = 99/168 (58.93%), Query Frame = 1
Query: 19 QDRRGKEEAYSAVKGMLKGLGDPYTRFLTPQEYDAVTGLARGGVAGVGLELASSPASSGNPLSVIVAGVVDGSPAEKAGVLTGDVLSAVDGDEASGADLDAVAGMLRGDPGSGVRLDVRRGGKAFAFPLTRAQFKYQGVRSEVRSSGGQKVGIVSIKVFSKDTFEDVR 522
+D + +EEAY+A++ ML+ L DPYTRF++P E+ ++ G + GVG+++ + ++V ++ +PA AG+L+ DV++ +DG G ++D ++RG PG+ V L + R G+A +PLTR + VR++V G +VG + + FS E++R
Sbjct: 75 RDYKNQEEAYTAIREMLEKLNDPYTRFMSPDEFQSMRIDTSGELTGVGIQITQDQDTK----KIVVVAPIEDTPAYNAGILSKDVITKIDGKSTDGMEVDDAVKLIRGKPGTSVVLTIEREGQAIEYPLTRTLIEIHPVRAQVEDINGARVGYIRLNQFSAQASEEMR 238
BLAST of mRNA_Ecto-sp13_S_contig20272.6663.1 vs. uniprot
Match: A0A7C3PHE3_9CYAN (PDZ domain-containing protein n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3PHE3_9CYAN) HSP 1 Score: 110 bits (276), Expect = 1.520e-25 Identity = 61/163 (37.42%), Postives = 98/163 (60.12%), Query Frame = 1
Query: 34 KEEAYSAVKGMLKGLGDPYTRFLTPQEYDAVTGLARGGVAGVGLELASSPASSGNPLSVIVAGVVDGSPAEKAGVLTGDVLSAVDGDEASGADLDAVAGMLRGDPGSGVRLDVRRGGKAFAFPLTRAQFKYQGVRSEVRSSGGQKVGIVSIKVFSKDTFEDVR 522
KEEAY A++ MLK L DPYTRF+ PQEY + G + GVG++LA+ + + V ++ SPA +AG+L D++S++DG G D++ ++RG PG+ V L ++RG + F LTRA+ + V++ V+ S +VG + + FS ++ D+R
Sbjct: 80 KEEAYKAIREMLKKLDDPYTRFMDPQEYRNMQIDTSGELTGVGIQLAADEKTK----KLTVVSPIEDSPASRAGILAKDIISSIDGKSTEGMDVNQAVTLIRGQPGTKVILGIQRGEEQLKFELTRARIELHAVKASVQQSPEGQVGYIRLTQFSANSPSDMR 238 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20272.6663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20272.6663.1 >prot_Ecto-sp13_S_contig20272.6663.1 ID=prot_Ecto-sp13_S_contig20272.6663.1|Name=mRNA_Ecto-sp13_S_contig20272.6663.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=175bp KVLKQVQDRRGKEEAYSAVKGMLKGLGDPYTRFLTPQEYDAVTGLARGGVback to top mRNA from alignment at Ecto-sp13_S_contig20272:406..2798+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20272.6663.1 ID=mRNA_Ecto-sp13_S_contig20272.6663.1|Name=mRNA_Ecto-sp13_S_contig20272.6663.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2393bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20272:406..2798+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20272:406..2798+ >mRNA_Ecto-sp13_S_contig20272.6663.1 ID=mRNA_Ecto-sp13_S_contig20272.6663.1|Name=mRNA_Ecto-sp13_S_contig20272.6663.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=525bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20272:406..2798+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |