mRNA_Ecto-sp13_S_contig2025.6654.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig2025.6654.1 vs. uniprot
Match: D7FKL7_ECTSI (HU-CCDC81_euk_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL7_ECTSI) HSP 1 Score: 731 bits (1887), Expect = 5.850e-261 Identity = 413/566 (72.97%), Postives = 425/566 (75.09%), Query Frame = 1
Query: 88 MRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVVFSFGTLEVKERKFQFTFDCAALCRNGSTTTRTDTSSSCGGEHEEREEWDGVSTGRSRSSSGLPPRPPAGSGLGARHGSDDGXXXXXXXHLTNAEPPPGTPCPGASERGGWNQAPTDDDGAGGRSCPGGCVLGKKFDEEVERQRAQEVAAERGRKRGSGKRCRTREKASRSPTRLVWESAFRDHVTALEGLAEDDVNLANRTRLLQLAEDRRKSEERENKQREMHDLLTFVQGQIHAEIEDRRALEVESKRNGEKPLTFSARRDRASTLTEKYRGTAWRAPDWGPRRARATNITRDELLGCLQRQIREREEERVRGNRRRLVEEKAAIEKLDRDYDAKEAWKKAEREVAQMELKRSWEVHGQIKRMRALAKAGPTALRNYALSQNIIDQDGKNNDSPEGRARTGWTEPGPRAITGPSKLYMKGVCRYRPWVDVSEEGRRVNGNDCRGGGSGNYRPEAEDRDSSRPSTALLETPSSVGFDSRLSARHVN 1785
MRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVVFSFGTLEVKERKFQFTFDCAALCRNGSTTTRTDTSSSCGGE EREEWDG+STGRSRSSSGL PR PAGSGLGAR+ SDDG XXXXXX NAEPPPGTPC G SER GWNQ PT CPG VLGK+FDEEVERQRAQEVAAERGRKRGSGKRC+TREK VWESAFRDHVTALEGLAEDD+ IEDRRALEVESKRNG+KPLTFSARRDRAST+ EKYRGTAWRAPDWGPRRARA+N+TRDELLGCLQ LDRDYDAKEA KKAEREVAQMELKRSWE LSQ+IIDQDGKN D+PEGRARTGWTE GPRAITGPSKLYMKGVCRYRPWVD E GRRVNGND RGGG GN RPEAED D RPST L E PSSVGFDSRLSAR V+
Sbjct: 1 MRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVVFSFGTLEVKERKFQFTFDCAALCRNGSTTTRTDTSSSCGGERGEREEWDGLSTGRSRSSSGLSPRRPAGSGLGARNCSDDGHXXXXXXXXRNAEPPPGTPCTGISERDGWNQPPTXXXXXXXGRCPGEGVLGKEFDEEVERQRAQEVAAERGRKRGSGKRCKTREK--------VWESAFRDHVTALEGLAEDDM------------------------------------------IEDRRALEVESKRNGDKPLTFSARRDRASTVNEKYRGTAWRAPDWGPRRARASNLTRDELLGCLQ---------------------------LDRDYDAKEARKKAEREVAQMELKRSWE-----------------------LSQSIIDQDGKN-DAPEGRARTGWTEAGPRAITGPSKLYMKGVCRYRPWVDAGERGRRVNGNDSRGGGGGNDRPEAEDGDCRRPSTTLSEAPSSVGFDSRLSARRVH 465
BLAST of mRNA_Ecto-sp13_S_contig2025.6654.1 vs. uniprot
Match: F0YCP0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCP0_AURAN) HSP 1 Score: 87.4 bits (215), Expect = 2.470e-14 Identity = 54/144 (37.50%), Postives = 80/144 (55.56%), Query Frame = 1
Query: 1 LEILVHRGTVDVPNFMRVGWQ---RFQTLDGEMRL-----------RPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVVFSFGTLEVKERKFQFTFDCAAL 390
L+ ++ R VPNF + WQ F D + RL RPVF+ E FCR+H LP +R L + ++YS LA+RY++ +TKDMV+ ALR+V R +G+ ++SG + V S G+L + K +F FD A+L
Sbjct: 43 LDRVIQRRGAAVPNFGKFTWQVLGGFTPADLDPRLAGKKAASKIPLRPVFMFAENFCRSHGLPWRRQNEADLVK--CGDLDYSNLALRYSSHLTKDMVFAALRDVTRRVGEKIASGFALRVKMSVGSLVCEHGKCRFEFDAASL 184
BLAST of mRNA_Ecto-sp13_S_contig2025.6654.1 vs. uniprot
Match: A0A8J2SU03_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU03_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.430e-12 Identity = 55/140 (39.29%), Postives = 79/140 (56.43%), Query Frame = 1
Query: 4 EILVHRGTVDVPNFMRVGWQ---RFQTLDGEMR------LRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVVFSFGTLEVKERKFQFTFDCAALCR 396
++L RG +P F R WQ ++ D + R LRPVF +E FC+AH LP + I L A +NYS LA+R+T+ +TKDMV+ ALR++ R IGD ++SG +++ F G L K +F FD + L R
Sbjct: 56 KLLAKRGA-SIPGFGRFTWQVLGDYKPSDLQDRPDELIPLRPVFQFSEDFCKAHLLPWRPIAEDKLVECAD--LNYSILALRHTSRLTKDMVWSALRDLQRKIGDRIASGYSLTLDFGVGQLVSDRGKPRFLFDASKLRR 192
BLAST of mRNA_Ecto-sp13_S_contig2025.6654.1 vs. uniprot
Match: A0A7S3LXY3_9EUKA (Hypothetical protein n=4 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3LXY3_9EUKA) HSP 1 Score: 81.3 bits (199), Expect = 1.790e-12 Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 1
Query: 34 VPNFMRVGWQRFQTLDGEMRL-RPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVVFSFGTLEVKERKFQFTFD 378
+P F R W R ++ G+ +L RP+FIL+E F ++H+L +K+ E +NY+KLAIR+T+ ++KD VY A+R++ + +G ++ G V V F G L K+++ F FD
Sbjct: 85 MPQFARFAW-RVESEKGDSKLLRPIFILSESFGKSHNLRYKKGTPKLPGLVGCEDINYAKLAIRFTSTLSKDNVYTAMRDLVQKLGSTIADGRDVRVDFRVGRLVAKDKRVDFLFD 199
BLAST of mRNA_Ecto-sp13_S_contig2025.6654.1 vs. uniprot
Match: A0A5D6XS35_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XS35_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.940e-12 Identity = 38/123 (30.89%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 28 VDVPNFMRVGWQRFQTLDGEMRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVVFSFGTLEVKERKFQFTFDCAALCR 396
V + F + W+ + +LRPVF+L++ F R + L H++ P A E +N++K+AI+++ +TKD+V+ +R++ + +G+ +G Q+S+ FS G L K R FD + R
Sbjct: 180 VHIATFASISWETCTNSRNQPKLRPVFVLSDTFARTYGLQHRKPPSPGGLG-ALEEINFTKIAIKFSRTLTKDLVFSGVRDLLQRLGELAGAGAQLSIAFSVGRLVAKNRVVSMVFDPVQIPR 301
BLAST of mRNA_Ecto-sp13_S_contig2025.6654.1 vs. uniprot
Match: W2I8D9_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2I8D9_PHYPR) HSP 1 Score: 79.3 bits (194), Expect = 6.760e-12 Identity = 39/117 (33.33%), Postives = 67/117 (57.26%), Query Frame = 1
Query: 28 VDVPNFMRVGWQRFQTLDGEMRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVVFSFGTLEVKERKFQFTFD 378
V + F + W+ F + +LRP+F L++ F + + L KR P + E +N++K+AI+++ +TKD+V+ A+R++ + IG S+G +S+ FSFG L K R FD
Sbjct: 52 VHIATFATITWETFTNSRNQPKLRPIFFLSDTFTKTYVLSQKRPPLPSANLASLEDINFTKIAIKFSRNLTKDLVFCAIRDLVQKIGMVASTGVPMSIEFSFGRLIAKNRCISMLFD 168
BLAST of mRNA_Ecto-sp13_S_contig2025.6654.1 vs. uniprot
Match: A0A3F2RWM9_9STRA (HU-CCDC81_euk_2 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWM9_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 8.100e-12 Identity = 39/117 (33.33%), Postives = 64/117 (54.70%), Query Frame = 1
Query: 28 VDVPNFMRVGWQRFQTLDGEMRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVVFSFGTLEVKERKFQFTFD 378
V V F + W+ F + +LRP F L++ F + + L KR P E +N++K+AI+++ +TKD+V+ +R++ + IG S+G VS+ F+FG L K R FD
Sbjct: 135 VHVATFATITWETFTDSRNQPKLRPTFFLSDTFIKTYGLSQKRPPLPSATLAPLEDINFTKIAIKFSHSLTKDLVFSGVRDMVQKIGYVASTGAPVSITFNFGRLIAKNRCISVLFD 251
BLAST of mRNA_Ecto-sp13_S_contig2025.6654.1 vs. uniprot
Match: A0A225UVB3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UVB3_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 8.480e-12 Identity = 38/117 (32.48%), Postives = 66/117 (56.41%), Query Frame = 1
Query: 28 VDVPNFMRVGWQRFQTLDGEMRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVVFSFGTLEVKERKFQFTFD 378
V + F + W+ F + +LRP F L++ F + ++L KR P A E +N++K+AI+++ +TKD+V+ A+R++ + IG S+G +S+ +FG L K R FD
Sbjct: 52 VHIATFATITWETFTNSRNQPKLRPTFFLSDTFIKTYNLSQKRPPLPTANLAALEDINFTKIAIKFSRNLTKDLVFCAIRDMVQKIGMVASTGAPMSITLNFGRLIAKNRCVSVLFD 168
BLAST of mRNA_Ecto-sp13_S_contig2025.6654.1 vs. uniprot
Match: A0A8K1FKM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKM3_PYTOL) HSP 1 Score: 79.0 bits (193), Expect = 8.670e-12 Identity = 35/117 (29.91%), Postives = 68/117 (58.12%), Query Frame = 1
Query: 28 VDVPNFMRVGWQRFQTLDGEMRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVVFSFGTLEVKERKFQFTFD 378
V + F + W+ + +LRP+F+L++ F +++ L K+ L PP + E +N++K+AI+++ +TKD+V+ +R++ + IG+ +G +S+ F+ G L K R FD
Sbjct: 52 VHIATFATISWETCTNSRNQPKLRPLFLLSDTFIKSYGLQQKKPLTPPCLA-SLEDINFTKIAIKFSKNLTKDLVFSGIRDLLQKIGEVAGAGTPMSITFNIGRLIAKNRCISLVFD 167
BLAST of mRNA_Ecto-sp13_S_contig2025.6654.1 vs. uniprot
Match: A0A2P4XRT6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRT6_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 2.050e-11 Identity = 39/121 (32.23%), Postives = 67/121 (55.37%), Query Frame = 1
Query: 16 HRGTVDVPNFMRVGWQRFQTLDGEMRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVVFSFGTLEVKERKFQFTFD 378
H V + F + W+ F + +LRP F L++ F + + L KR P + E +N++K+AI+++ +TKD+V+ A+R++ + IG S+G +S+ F+FG L K R FD
Sbjct: 48 HGKGVHIATFATITWETFTNSRNQPKLRPTFFLSDTFVKTYGLSQKRPPLPSANLASLEDINFTKIAIKFSHNLTKDLVFCAIRDMVQKIGMVASTGVAMSIEFNFGRLIAKNRCISVLFD 168 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig2025.6654.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig2025.6654.1 >prot_Ecto-sp13_S_contig2025.6654.1 ID=prot_Ecto-sp13_S_contig2025.6654.1|Name=mRNA_Ecto-sp13_S_contig2025.6654.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=596bp LEILVHRGTVDVPNFMRVGWQRFQTLDGEMRLRPVFILNEGFCRAHDLPHback to top mRNA from alignment at Ecto-sp13_S_contig2025:1..8877+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig2025.6654.1 ID=mRNA_Ecto-sp13_S_contig2025.6654.1|Name=mRNA_Ecto-sp13_S_contig2025.6654.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8877bp|location=Sequence derived from alignment at Ecto-sp13_S_contig2025:1..8877+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig2025:1..8877+ >mRNA_Ecto-sp13_S_contig2025.6654.1 ID=mRNA_Ecto-sp13_S_contig2025.6654.1|Name=mRNA_Ecto-sp13_S_contig2025.6654.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1788bp|location=Sequence derived from alignment at Ecto-sp13_S_contig2025:1..8877+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |