mRNA_Ecto-sp13_S_contig20247.6653.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20247.6653.1 vs. uniprot
Match: D7G331_ECTSI (Lysocardiolipin acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G331_ECTSI) HSP 1 Score: 399 bits (1026), Expect = 5.690e-136 Identity = 203/207 (98.07%), Postives = 204/207 (98.55%), Query Frame = 1
Query: 130 MVASARGFVFVAVLFVSSLLYSVTLLTPALLLLIPISPPGVYLCFRRAYRRWSGFVGYLFFAMAAFLLENLCGIKVKITGDRSEFGEAALIICNHRTRVDWMFLWCLCLRQGQLSSLKIVLKESLKGIPGLGWATQMLLFVFLKRDKTKDLQRVREISDYLVGLNMPTTLLLFPEGTDLSPNNHLKSLAFAKKEGLAEYQYVLHPKV 750
MVASARGFVFVAVLFVSSLLYSVTLLTPALLLLIPISPPGVYL FRRAYRRWSGFVGYLFFAMAAFLLENLCGIKVKITGDR EFGEAALIICNHRTRVDWMFLWCLCLRQGQLSSLKIVLKESLKGIPG GWATQMLLFVFLKRDKTKDLQRVREISDYLVGL+MPTTLLLFPEGTDLSPNNHLKSLAFAKKEGLAEYQYVLHPKV
Sbjct: 1 MVASARGFVFVAVLFVSSLLYSVTLLTPALLLLIPISPPGVYLFFRRAYRRWSGFVGYLFFAMAAFLLENLCGIKVKITGDRLEFGEAALIICNHRTRVDWMFLWCLCLRQGQLSSLKIVLKESLKGIPGFGWATQMLLFVFLKRDKTKDLQRVREISDYLVGLDMPTTLLLFPEGTDLSPNNHLKSLAFAKKEGLAEYQYVLHPKV 207
BLAST of mRNA_Ecto-sp13_S_contig20247.6653.1 vs. uniprot
Match: A0A6H5KSC6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC6_9PHAE) HSP 1 Score: 258 bits (658), Expect = 2.100e-79 Identity = 132/159 (83.02%), Postives = 133/159 (83.65%), Query Frame = 1
Query: 355 VKITGDRSEFGEAALIICNHRTRVDWMFLWCLCLRQGQLSSLKIVLKESLKGIPGLGWATQ--------------------MLLFVFLKRDKTKDLQRVREISDYLVGLNMPTTLLLFPEGTDLSPNNHLKSLAFAKKEGLAEYQYVLHPKVVRWLR*C 771
VKITGDR EFGEAALIICNHRTRVDWMFLWCLCLRQGQLSSLKIVLKESLKGIPG GWATQ MLLFVFLKRDKTKDLQRVREISDYLVGLNMPTTLLLFPEGTDLSPNNH+KSLAFAKKEGLAEYQYVLHPKVVR C
Sbjct: 147 VKITGDRVEFGEAALIICNHRTRVDWMFLWCLCLRQGQLSSLKIVLKESLKGIPGFGWATQASKSLGSLRRFSEQASTLEKMLLFVFLKRDKTKDLQRVREISDYLVGLNMPTTLLLFPEGTDLSPNNHIKSLAFAKKEGLAEYQYVLHPKVVRGFSEC 305
BLAST of mRNA_Ecto-sp13_S_contig20247.6653.1 vs. uniprot
Match: A0A7S4KEA5_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KEA5_GUITH) HSP 1 Score: 204 bits (518), Expect = 7.250e-61 Identity = 101/207 (48.79%), Postives = 141/207 (68.12%), Query Frame = 1
Query: 148 GFVFVAVLFVSSLLYSVTLLTPAL-LLLIPISPPGVYLCFRRAYRRWSGFVGYLFFAMAAFLLENLCGIKVKITGDRSEFGEAALIICNHRTRVDWMFLWCLCLRQGQLSSLKIVLKESLKGIPGLGWATQMLLFVFLKRDKTKDLQRVREISDYLVGLNMPTTLLLFPEGTDLSPNNHLKSLAFAKKEGLAEYQYVLHPKVVRWLR 765
G V + L S+L+ S+ L+ P+L LL++P R YR+WS +V ++F +A ++E +K+ ++GD + E A+I+CNHRTR+DWMF+WCLCLR G L+ +KIVLK+SLK IPG GWA Q LFVFL RDK+ DL+ + E+ Y +P +L+LFPEGTDLSP+N KS AFA + GL +Y++VLHPKV+ W R
Sbjct: 34 GLVLILTLVWSALVGSMALIMPSLCLLVLPFDGS------RMLYRQWSAYVAKMWFTLATLMIERYAKVKIVLSGDDLPYAEPAMIVCNHRTRIDWMFMWCLCLRLGLLNCMKIVLKDSLKSIPGFGWAMQSFLFVFLARDKSIDLKHMGEMLGYHTNNKLPLSLILFPEGTDLSPHNMAKSDAFASQNGLTKYRHVLHPKVIGWAR 234
BLAST of mRNA_Ecto-sp13_S_contig20247.6653.1 vs. uniprot
Match: A0A835YZY7_9STRA (Lysocardiolipin acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY7_9STRA) HSP 1 Score: 190 bits (483), Expect = 8.320e-54 Identity = 100/206 (48.54%), Postives = 139/206 (67.48%), Query Frame = 1
Query: 145 RGFVFVAVLFVSSLLYSVTLLTPALLLLIPISPPGVYLCFRRAYRRWSGFVGYLFFAMAAFLLENLCGIKVKITGDRSEFGEAALIICNHRTRVDWMFLWCLCLRQGQLSSLKIVLKESLKGIPGLGWATQMLLFVFLKRDKTKDLQRVREISDYLVGLNMPTTLLLFPEGTDLSPNNHLKSLAFAKKEGLAEYQYVLHPKVVRWL 762
R +F+A+L + + +Y + LL PAL +L+ I PP C R YR W+G V +F AA +LE+L G++V + GD E ALI+ NHRTRVDWMF+WCLC R QL+ L+IVL++++K +PG+GW Q LFVFL RD+++DL +R++ YLV + PTTLLLFPEGTDLS +N K+ +A+ L + YVL PKV +L
Sbjct: 18 RSLLFLALLLLQTFVYVIFLLAPALPMLLSI-PPLRDSCMR-CYRYWAGMVEVAYFGFAAAMLEHLLGVRVVVYGDEVPPRERALILSNHRTRVDWMFIWCLCARTHQLAQLRIVLQDAVKSLPGIGWGCQAFLFVFLARDRSRDLAHMRQVFRYLVTHHYPTTLLLFPEGTDLSRSNLEKAHKYAESRRLQRHDYVLQPKVAGFL 221
BLAST of mRNA_Ecto-sp13_S_contig20247.6653.1 vs. uniprot
Match: L1IMF4_GUITC (PlsC domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IMF4_GUITC) HSP 1 Score: 186 bits (473), Expect = 4.870e-53 Identity = 98/207 (47.34%), Postives = 133/207 (64.25%), Query Frame = 1
Query: 148 GFVFVAVLFVSSLLYSVTLLTPAL-LLLIPISPPGVYLCFRRAYRRWSGFVGYLFFAMAAFLLENLCGIKVKITGDRSEFGEAALIICNHRTRVDWMFLWCLCLRQGQLSSLKIVLKESLKGIPGLGWATQMLLFVFLKRDKTKDLQRVREISDYLVGLNMPTTLLLFPEGTDLSPNNHLKSLAFAKKEGLAEYQYVLHPKVVRWLR 765
G V + L S+L+ S+ L+ P+L LL++P R YR+WS +V +K+ ++GD + E A+I+CNHRTR+DWMF+WCLCLR G L+ +KIVLK+SLK IPG GWA Q LFVFL RDK+ DL+ + E+ Y +P +L+LFPEGTDLSP+N KS AFA + GL +Y++VLHPKV+ W R
Sbjct: 3 GLVLILTLVWSALVGSMALIMPSLCLLVLPFDGS------RMLYRQWSAYVAK---------------VKIVLSGDDLPYAEPAMIVCNHRTRIDWMFMWCLCLRLGLLNCMKIVLKDSLKSIPGFGWAMQSFLFVFLARDKSIDLKHMGEMLGYHTNNKLPLSLILFPEGTDLSPHNMAKSDAFASQNGLTKYRHVLHPKVIGWAR 188
BLAST of mRNA_Ecto-sp13_S_contig20247.6653.1 vs. uniprot
Match: A0A8J4ULC8_CLAMG (Lysocardiolipin acyltransferase 1 (Fragment) n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4ULC8_CLAMG) HSP 1 Score: 155 bits (392), Expect = 1.250e-42 Identity = 89/204 (43.63%), Postives = 121/204 (59.31%), Query Frame = 1
Query: 139 SARGFVFVAVLFVSSLLYSVTLLTPALLLLIPISPPGVYLCFRRAYRRW-SGFVGYLFFAMAAFLLENLCGIKVKITGDRSEFGEAALIICNHRTRVDWMFLWCLCLRQGQLSSLKIVLKESLKGIPGLGWATQMLLFVFLKRDKTKDLQRVREISDYLVGLNMPTTLLLFPEGTDLSPNNHLKSLAFAKKEGLAEYQYVLHPK 747
S RG F+ LF+SS SV +L PAL +++ +SP A+ RW + + + + LLE + G+KV ITGD GE ++II NHRTR+DWMFLWC LR L KI LK +LK +PG GWA Q+ F+F+ R D + + +Y + P LLLFPEGTDL+ N +S FA+K GL +Y+YVLHP+
Sbjct: 5 SIRGVYFILTLFLSSFFGSVIMLGPALPIML-LSP---------AWYRWLTDRIVATWLTLPVALLEIVFGVKVIITGDGFVPGERSVIIMNHRTRLDWMFLWCCLLRHSYLRLEKICLKAALKAVPGFGWAMQVASFIFIHRKWEDDQNHLTNMLEYFCDIRQPLQLLLFPEGTDLTENTRARSDEFAEKNGLPKYEYVLHPR 198
BLAST of mRNA_Ecto-sp13_S_contig20247.6653.1 vs. uniprot
Match: A0A3B3QP71_9TELE (Lysocardiolipin acyltransferase 1 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3QP71_9TELE) HSP 1 Score: 159 bits (403), Expect = 2.330e-42 Identity = 91/207 (43.96%), Postives = 125/207 (60.39%), Query Frame = 1
Query: 130 MVASARGFVFVAVLFVSSLLYSVTLLTPALLLLIPISPPGVYLCFRRAYRRW-SGFVGYLFFAMAAFLLENLCGIKVKITGDRSEFGEAALIICNHRTRVDWMFLWCLCLRQGQLSSLKIVLKESLKGIPGLGWATQMLLFVFLKRDKTKDLQRVREISDYLVGLNMPTTLLLFPEGTDLSPNNHLKSLAFAKKEGLAEYQYVLHPK 747
M SARG FV LF++S SV +L P L L++ +SP A+ RW + + + + LLE + G+KV ITGD GE ++I+ NHRTR+DWMFLWC LR L KI LK +LK +PG GWA Q+ FVF++R +D + + ++ DY + P LL+FPEGTDL+ N +S FA+K GL Y+YVLHP+
Sbjct: 1 MAVSARGLYFVTTLFLTSFFGSVFMLGPVLPLML-LSP---------AWYRWLTDRIVATWLTLPVALLELVFGVKVVITGDGFIPGERSVIVMNHRTRLDWMFLWCCLLRYSYLRLEKICLKAALKAVPGFGWAMQVACFVFIQRRWEQDRRHLGDMLDYFCAIREPLQLLIFPEGTDLTENTRARSDDFAEKNGLPRYEYVLHPR 197
BLAST of mRNA_Ecto-sp13_S_contig20247.6653.1 vs. uniprot
Match: UPI0007DB7B39 (lysocardiolipin acyltransferase 1 isoform X2 n=1 Tax=Anolis carolinensis TaxID=28377 RepID=UPI0007DB7B39) HSP 1 Score: 154 bits (390), Expect = 4.430e-42 Identity = 92/206 (44.66%), Postives = 122/206 (59.22%), Query Frame = 1
Query: 133 VASARGFVFVAVLFVSSLLYSVTLLTPALLLLIPISPPGVYLCFRRAYRRW-SGFVGYLFFAMAAFLLENLCGIKVKITGDRSEFGEAALIICNHRTRVDWMFLWCLCLRQGQLSSLKIVLKESLKGIPGLGWATQMLLFVFLKRDKTKDLQRVREISDYLVGLNMPTTLLLFPEGTDLSPNNHLKSLAFAKKEGLAEYQYVLHPK 747
+ S +G FV LF+ S S+ +L P L L+ +SP A+ RW + V + + LLE + G KV ITGD GE ++II NHRTR+DWMFLW LR L KI LK SLKGIPG GWA Q+ F+F+ R +D + ++ DY ++ P LLLFPEGTDL+ N +S AFA+K GL +Y+YVLHP+
Sbjct: 1 MVSWKGIYFVLALFLGSFFGSIFMLAPVLPLMF-VSP---------AWYRWITDRVVATWLTLPVALLEIVFGAKVVITGDGFIPGERSVIIMNHRTRMDWMFLWNCLLRYSYLRLEKICLKSSLKGIPGFGWAMQVAAFIFIHRKWEEDKKHFEKMLDYFCDIHEPLQLLLFPEGTDLTDNTKARSNAFAEKNGLQKYEYVLHPR 196
BLAST of mRNA_Ecto-sp13_S_contig20247.6653.1 vs. uniprot
Match: A0A3B5JVL8_TAKRU (PlsC domain-containing protein n=8 Tax=Eupercaria TaxID=1489922 RepID=A0A3B5JVL8_TAKRU) HSP 1 Score: 157 bits (398), Expect = 1.130e-41 Identity = 91/207 (43.96%), Postives = 123/207 (59.42%), Query Frame = 1
Query: 130 MVASARGFVFVAVLFVSSLLYSVTLLTPALLLLIPISPPGVYLCFRRAYRRW-SGFVGYLFFAMAAFLLENLCGIKVKITGDRSEFGEAALIICNHRTRVDWMFLWCLCLRQGQLSSLKIVLKESLKGIPGLGWATQMLLFVFLKRDKTKDLQRVREISDYLVGLNMPTTLLLFPEGTDLSPNNHLKSLAFAKKEGLAEYQYVLHPK 747
M SARG FV LF+ S S+ +L P L L+ +SP A+ RW + + + + LLE + G+KV ITGD GE ++II NHRTR+DWMFLWC LR L KI LK +LK +PG GWA Q+ FVF++R +D + + + DY + P LLLFPEGTDL+ N +S AFA + GL +++YVLHP+
Sbjct: 1 MAVSARGLYFVVTLFLGSFFGSIFMLGPVLPLMF-LSP---------AWYRWITDRIVATWLTLPVSLLELVFGVKVVITGDGFIPGERSVIIMNHRTRLDWMFLWCCLLRYSYLRLEKICLKAALKAVPGFGWAMQVACFVFIQRRWVEDKKHMENMLDYFCDIREPLQLLLFPEGTDLTENTRQRSDAFAAQNGLPKFEYVLHPR 197
BLAST of mRNA_Ecto-sp13_S_contig20247.6653.1 vs. uniprot
Match: UPI0015D6416C (lysocardiolipin acyltransferase 1 isoform X2 n=1 Tax=Cygnus atratus TaxID=8868 RepID=UPI0015D6416C) HSP 1 Score: 153 bits (387), Expect = 1.460e-41 Identity = 95/224 (42.41%), Postives = 126/224 (56.25%), Query Frame = 1
Query: 133 VASARGFVFVAVLFVSSLLYSVTLLTPALLLLIPISPPGVYLCFRRAYRRW-SGFVGYLFFAMAAFLLENLCGIKVKITGDRSEFGEAALIICNHRTRVDWMFLWCLCLRQGQLSSLKIVLKESLKGIPGLGWATQMLLFVFLKRDKTKDLQRVREISDYLVGLNMPTTLLLFPEGTDLSPNNHLKSLAFAKKEGLAEYQYVLHPK------VVRWLR*CTCSC 783
+ S +G FV LF+ S S+ +L P L L+ +SP A+ RW + V + + LLE + G KV +TGD GE ++II NHRTR+DWMFLW LR L KI LK SLK IPG GWA Q+ F+F++R D ++ DY +N P LL+FPEGTDL+ + +S FA+K GL +Y+YVLHP+ VV LR CSC
Sbjct: 1 MVSWKGIYFVVALFLGSFFGSIFMLGPFLPLMF-VSP---------AWYRWITDCVVATWLTLPVALLEMVFGAKVVVTGDGFVPGERSVIIMNHRTRMDWMFLWNCLLRYSYLRLEKICLKSSLKSIPGFGWAMQVAAFIFIQRKWEDDKSHFEKMLDYFCDINEPLQLLIFPEGTDLTESTKARSNDFAEKNGLRKYEYVLHPRTTGFTFVVECLREDECSC 214 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20247.6653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20247.6653.1 >prot_Ecto-sp13_S_contig20247.6653.1 ID=prot_Ecto-sp13_S_contig20247.6653.1|Name=mRNA_Ecto-sp13_S_contig20247.6653.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=213bp MVASARGFVFVAVLFVSSLLYSVTLLTPALLLLIPISPPGVYLCFRRAYRback to top mRNA from alignment at Ecto-sp13_S_contig20247:367..2750+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20247.6653.1 ID=mRNA_Ecto-sp13_S_contig20247.6653.1|Name=mRNA_Ecto-sp13_S_contig20247.6653.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2384bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20247:367..2750+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20247:367..2750+ >mRNA_Ecto-sp13_S_contig20247.6653.1 ID=mRNA_Ecto-sp13_S_contig20247.6653.1|Name=mRNA_Ecto-sp13_S_contig20247.6653.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=639bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20247:367..2750+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |