mRNA_Ecto-sp13_S_contig20233.6646.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig20233.6646.1
Unique NamemRNA_Ecto-sp13_S_contig20233.6646.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig20233.6646.1 vs. uniprot
Match: D7FNT7_ECTSI (Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT7_ECTSI)

HSP 1 Score: 702 bits (1813), Expect = 6.730e-250
Identity = 348/365 (95.34%), Postives = 353/365 (96.71%), Query Frame = 1
Query:    1 EEKAGRKWDIEPVLDRLVLFRSDLVEHEVLPTFAPRLAVTLWFYGRQLGLPASPSTRRPRSVPPLPAPERQLAAGDDTRDKVRALPSPTGSGAAHAAEASIFVSVVSYRDSEVNPTVVDLFARASNPGRVDVGLVWQLEEGVAEDEAMRRATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKPVLTTYPVGYQLPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAILVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQQNSTKEAEAEEAAANRRLRWLL 1095
            EEKAGRKWDIEPVLDRLVLFRSDLVEHEVLP  APRLAVTLWFYGRQLGLPASPSTR P SVPPLPAPE+QLAAGDDTRDKVR LPSP GSGAAHAAEASIFVSVVSYRDSE NPTVVDLFARA+NP RV VGLVWQLE GVAEDEAM RATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQS+WKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKP+LTTYPVGYQLPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASA+LVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQ NSTKEAEAEEAAANRRLRWLL
Sbjct:  240 EEKAGRKWDIEPVLDRLVLFRSDLVEHEVLPASAPRLAVTLWFYGRQLGLPASPSTRSPSSVPPLPAPEQQLAAGDDTRDKVRPLPSPAGSGAAHAAEASIFVSVVSYRDSEANPTVVDLFARATNPERVSVGLVWQLEAGVAEDEAMHRATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQSIWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKPILTTYPVGYQLPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAVLVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQ-NSTKEAEAEEAAANRRLRWLL 603          
BLAST of mRNA_Ecto-sp13_S_contig20233.6646.1 vs. uniprot
Match: A0A6H5L271_9PHAE (Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L271_9PHAE)

HSP 1 Score: 660 bits (1702), Expect = 9.190e-233
Identity = 323/343 (94.17%), Postives = 329/343 (95.92%), Query Frame = 1
Query:    1 EEKAGRKWDIEPVLDRLVLFRSDLVEHEVLPTFAPRLAVTLWFYGRQLGLPASPSTRRPRSVPPLPAPERQLAAGDDTRDKVRALPSPTGSGAAHAAEASIFVSVVSYRDSEVNPTVVDLFARASNPGRVDVGLVWQLEEGVAEDEAMRRATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKPVLTTYPVGYQLPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAILVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQ 1029
            EEKAGRKWDIEPVLDRLVLFRSDLVEHEVLP  APRLAVTLWFYGRQLGLPASPS RRP SVPPLPAPE+QLA GDDTRD VR LP P GSGAAHAAEASIFVSVVSYRDSE NPTVVDLFARA+NPGRV VGLVWQLE GVAEDEAMRRATPGGKEIRGGRVRSLFMPA +AAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLI TLQSCPSFKPVLTTYPVGY++PHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASA+LVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQ
Sbjct:  240 EEKAGRKWDIEPVLDRLVLFRSDLVEHEVLPALAPRLAVTLWFYGRQLGLPASPSARRPSSVPPLPAPEQQLAPGDDTRDNVRPLPPPDGSGAAHAAEASIFVSVVSYRDSEANPTVVDLFARAANPGRVSVGLVWQLEAGVAEDEAMRRATPGGKEIRGGRVRSLFMPAVEAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIQTLQSCPSFKPVLTTYPVGYEMPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAMLVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQ 582          
BLAST of mRNA_Ecto-sp13_S_contig20233.6646.1 vs. uniprot
Match: A0A835YQS0_9STRA (Procollagen-lysine 5-dioxygenase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS0_9STRA)

HSP 1 Score: 341 bits (874), Expect = 1.920e-108
Identity = 191/388 (49.23%), Postives = 240/388 (61.86%), Query Frame = 1
Query:   10 AGRKWDIEPVLDRLVLFRSDLVEHEVLPTFAPRLAVTLWFYGRQLGLPASPSTRRPRSVPPLPAP--------------ERQLAAGDDTRDKVRALPSPTGSGAAHAAEASIFVSVVSYRDSEVNPTVVDLFARASNPGRVDVGLVWQLEEGVAEDEAMRRATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKPVLTTYPVGYQLPHKIPAG--ETRPTLLVPDGFGPDGMLRQTGRLLLRK--------ARDPLPSPLWASGFSFSAS-AILVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQQNSTKEAEAEEAAANRRLRWLLG 1098
             G  WD+EPVLDR+VLFRS++VEHEVLP+FAPR A+T+WFYGR       P    P + P + AP                 L A  DTR ++  LP     G A    + IFVS+VSYRD E  PT+ DL + A+ P RV VGLV         +               GRV ++ M AA+AAGP WAR VA +LW+GE YVLQ DSH RFR  WD+YL+ TL+ CPS +P+LTTYP GY+LP+++P G  +T+ T+L P GFG DGMLRQ  R + ++        A +PL S LWA+GF+F  S A+L +  YDP LRH FFGEEA+MAAR+FT G+DF+APPQAV YHLWTR HR SFR+ N T E   E      R+R +LG
Sbjct:  196 GGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRP------PRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPL----GDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRE-NETAETARERQRGEARIRAVLG 572          
BLAST of mRNA_Ecto-sp13_S_contig20233.6646.1 vs. uniprot
Match: A0A833TAL9_PHYIN (Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TAL9_PHYIN)

HSP 1 Score: 306 bits (784), Expect = 4.010e-95
Identity = 167/339 (49.26%), Postives = 222/339 (65.49%), Query Frame = 1
Query:   22 WDIEPVLDRLVLFRSDLVEHEVLPTFAPRLAVTLWFYGRQLGLPASPSTRRPRSVPPLPAPERQLAAGDDTRDKVRALPSPTGSGAAHAAEASIFVSVVSYRDSEVNPTVVDLFARASNPGRVDVGLVWQLEEGVAEDEAMRRATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKPVLTTYPVGYQLPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAILVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQQNS 1038
            WD+ P LD L++FRS  VEHEV+PT+  R AVT+W+YG+     A+P++R   S  P P                  LPS TGS + HA +AS+FV++ SYRDSE   TV +L A+A+ P R+ +G+  Q ++   ED+          +    +VR  ++   +AAGP  ARR AQ L++GE   LQIDSH RFRPGWD +LI+ L+ CPS KP+LTTYP+GY LP++I + E RPTLL    F   GMLRQT ++L +K+  PLPS  WA+GF+FS+SAI+ EVPYD  LR  FFGEE+SMAAR++T GWDFF P +AVVYHLWTR +R  F++  S
Sbjct:  256 WDVPPNLDTLLVFRSLDVEHEVMPTYRERKAVTIWYYGKPSQ--AAPASRTETSSVPCP------------------LPSTTGSNSDHAEQASVFVAIPSYRDSECRHTVDNLLAQATFPERISIGICLQTDD---EDDTQAYLE---SKYSTSQVRVHWVDYREAAGPCVARRQAQKLYQGEDLYLQIDSHMRFRPGWDCFLINELEKCPSAKPILTTYPLGYTLPNEI-STECRPTLLCASSFDSLGMLRQTSKILAKKSTKPLPSLFWAAGFAFSSSAIIEEVPYDETLRFLFFGEESSMAARLWTSGWDFFTPSEAVVYHLWTRAYRPVFQELES 567          
BLAST of mRNA_Ecto-sp13_S_contig20233.6646.1 vs. uniprot
Match: A0A7S2SW69_9STRA (Procollagen-lysine 5-dioxygenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW69_9STRA)

HSP 1 Score: 302 bits (774), Expect = 1.140e-93
Identity = 176/388 (45.36%), Postives = 221/388 (56.96%), Query Frame = 1
Query:   22 WDIEPVLDRLVLFRSDLVEHEVLPTFAPRLAVTLWFYG-----------------RQLGLPAS--------------------------------------PSTRRPRSVPPLPAPERQLAAGDDTRDKVRALPSPTGSGAAHAAEASIFVSVVSYRDSEVNPTVVDLFARASNPGRVDVGLVWQLEEGVAEDEAMRRATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKPVLTTYPVGYQLPHKIPAGETRPTLLVPDGFG-PDGMLRQTGRLLLRKARDPLPSP-LWASGFSFSASAILVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHR 1014
            WD+EPV++RL++FRS  +EHEVLP +APR+AVT WFYG                   L LP+                                       P++  P S+PP   P R L   +D                 H   ++IFVS+ S+RDSE   TV+DLF  A  P R+ VG+V Q +  V +     +A       R  RVR L M    A GP  AR +AQ LW+GE YVLQIDSH RFRP WD+YL+H LQ CPS KPVLTTYP GY LP+ +P  E+RPTLL P  +G  DG+LRQTG+LL  +   P+    LWA+GF+F+A+A++ EVPYDP L   FFGEE SMAAR++T G+DFFAPP+AVVYHLWTR HR
Sbjct:  166 WDVEPVMNRLIIFRSHDLEHEVLPAWAPRIAVTTWFYGVLEGATPXXXXXXXXLLSSLALPSPVTKDPRKDGVGGLEVEGDQSSPTAAAHPESLLLLHHNVPTSAHPSSLPPCSPPRRSLQVSED-----------------HDGNSTIFVSIASFRDSECQHTVLDLFRTAQYPERLTVGIVGQYDA-VEDIRCFDQAPLPLAWAR--RVRVLHMDWQQAEGPCLARHLAQQLWRGEDYVLQIDSHMRFRPNWDTYLLHCLQQCPSSKPVLTTYPTGYTLPNHVP-DESRPTLLCPSHYGGADGVLRQTGKLLAARQSAPIACRGLWAAGFNFAAAAVIREVPYDPTLSFLFFGEEISMAARLWTHGYDFFAPPEAVVYHLWTRTHR 532          
BLAST of mRNA_Ecto-sp13_S_contig20233.6646.1 vs. uniprot
Match: A0A662X1I4_9STRA (P4Hc domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1I4_9STRA)

HSP 1 Score: 299 bits (765), Expect = 5.250e-93
Identity = 169/360 (46.94%), Postives = 224/360 (62.22%), Query Frame = 1
Query:   22 WDIEPVLDRLVLFRSDLVEHEVLPTFAPRLAVTLWFYGRQLGLPASPSTRRPRSVPPLPAPERQLAAGDDTRDKVRALPSPT--GSGAAHAAEASIFVSVVSYRDSEVNPTVVDLFARASNPGRVDVGLVWQLEEGVAEDEAMRRATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKPVLTTYPVGYQLPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAILVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQQNSTKEAEAEEAAANRRLRWLL 1095
            WD+ P LD LV+FRS  VEHEV+PT+  R+AVT+W+YG                  P  +P+  L  G   +  V   P P   G+ +    + SIFV++ SYRDSE   TV DL A A+ P R+ +G+  Q +E     E   RA  G +     +VR  ++    AAGP  AR  AQ LW+GE+Y LQIDSH RFRPGWD +LI  L+ CP+ KPVLTTYP+GY LP+++ + + RPT+L    F   GMLRQ+ + L +KA++PLPS LWA+GF+FS+S ++ EVPYD  L+  FFGEEASMAAR++T GWDFFAP +A VYHLW R HR  F Q+   ++ E   AA+ R +  LL
Sbjct:  182 WDVPPKLDTLVVFRSLDVEHEVMPTYHERMAVTIWYYGE-----------------PKLSPKPSLQEGLVRKASVTLPPLPVKLGNQSDSEQQESIFVAIPSYRDSECRHTVDDLLATATFPDRISIGICLQSDE-----EDGTRAYLG-ETYSPSKVRVHYVDYKSAAGPCVARAQAQKLWQGERYYLQIDSHMRFRPGWDCFLIDQLEKCPATKPVLTTYPLGYTLPNEV-SSDCRPTILCASAFDKHGMLRQSSKTLAQKAKEPLPSLLWAAGFAFSSSDVIKEVPYDATLQFLFFGEEASMAARLWTSGWDFFAPTEATVYHLWARDHRPVF-QELEDQQTEQSRAASVRYVERLL 516          
BLAST of mRNA_Ecto-sp13_S_contig20233.6646.1 vs. uniprot
Match: A0A329RXD0_9STRA (Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RXD0_9STRA)

HSP 1 Score: 300 bits (769), Expect = 7.120e-93
Identity = 170/351 (48.43%), Postives = 223/351 (63.53%), Query Frame = 1
Query:   22 WDIEPVLDRLVLFRSDLVEHEVLPTFAPRLAVTLWFYGRQLGLPASPSTRRPRSVPPLPAPERQLAAGDDTRDKVRALPSPTGSGAAHAAEASIFVSVVSYRDSEVNPTVVDLFARASNPGRVDVGLVWQLEEGVAEDEAMRRATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKPVLTTYPVGYQLPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAILVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQQNSTKEAEAEEAAAN 1074
            WD+ P LD L++FRS  VEHEV+PT+  R AVT+W+YG      ASP+  R  ++P +P P                LPS TG+ + HA  ASIFVS+ SYRDSE   TV +L  +A+ PGRV +G+  Q +     D+   RA    K     +VR   +    AAGP  AR  AQ LW+GE++ LQIDSH RFRPGWD +LI+ L+ CPS KP+LTTYP+GY LP++I + E RPTLL    F   GMLRQT ++L + +  PLPS  WA+GF+FS+S ++ EVPYD  LR  FFGEE+SMAAR++T GWDFF P + VVYHLWTR +R  F++  S +      A+A+
Sbjct:  250 WDVSPKLDTLMVFRSLDVEHEVMPTYRERKAVTIWYYGEPPE--ASPAIARSEALP-VPRP----------------LPSITGNKSDHAERASIFVSIPSYRDSECRHTVDNLLTQATFPGRVSIGICLQTD-----DDDDTRAYLESK-YSSSKVRVHGVDFRKAAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLINELEKCPSPKPILTTYPLGYTLPNEI-SSECRPTLLCASTFDSLGMLRQTSKILAKISTKPLPSLFWAAGFAFSSSKVIEEVPYDETLRFLFFGEESSMAARLWTSGWDFFTPSETVVYHLWTRTYRPVFQELESDETKRYRSASAH 574          
BLAST of mRNA_Ecto-sp13_S_contig20233.6646.1 vs. uniprot
Match: W2QK95_PHYPN (Procollagen-lysine 5-dioxygenase n=9 Tax=Phytophthora TaxID=4783 RepID=W2QK95_PHYPN)

HSP 1 Score: 297 bits (760), Expect = 1.500e-91
Identity = 163/351 (46.44%), Postives = 214/351 (60.97%), Query Frame = 1
Query:   22 WDIEPVLDRLVLFRSDLVEHEVLPTFAPRLAVTLWFYGRQLGLPASPSTRRPRSVPPLPAPERQLAAGDDTRDKVRALPSPTGSGAAHAAEASIFVSVVSYRDSEVNPTVVDLFARASNPGRVDVGLVWQLEEGVAEDEAMRRATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKPVLTTYPVGYQLPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAILVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQQNSTKEAEAEEAAAN 1074
            WD+ P LD LVLFRS  VEHEV+PT+  R AVT+W+YG+     ++ +     SVP                   R LPS TG+ A H  + SIFV++ SYRDSE   TV +L ARA+ P R+ +G+  Q +E       ++      K      V   ++    AAGP  AR  AQ LW+GE++ LQIDSH RFRPGWD +LI  L  CPS KP+LTTYP+GY LP++I + E RPTLL    F   GMLRQT ++L  K+  PLPS  WA+GF+FS+S ++ +VPYD  LR  FFGEE+SM AR++T GWDFF P + VVYHLWTR +R  F++  S +      A+A+
Sbjct:  256 WDVPPKLDTLVLFRSRDVEHEVMPTYRERKAVTIWYYGKPSKASSALARTEVLSVP-------------------RPLPSITGNEANHTTQPSIFVAIPSYRDSECRHTVDNLLARATFPERISIGICLQTDENDGTSAYLKSKYSTSK------VCVQWVDYRQAAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLISELGKCPSSKPILTTYPLGYTLPNEI-STECRPTLLCASSFDSLGMLRQTSKILSTKSTKPLPSLFWAAGFAFSSSKVIEQVPYDATLRFLFFGEESSMTARLWTSGWDFFTPSETVVYHLWTRAYRPVFQELESGETQRYRSASAH 580          
BLAST of mRNA_Ecto-sp13_S_contig20233.6646.1 vs. uniprot
Match: A0A2D4C2G2_PYTIN (Procollagen-lysine 5-dioxygenase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2G2_PYTIN)

HSP 1 Score: 294 bits (753), Expect = 1.420e-90
Identity = 166/361 (45.98%), Postives = 215/361 (59.56%), Query Frame = 1
Query:   22 WDIEPVLDRLVLFRSDLVEHEVLPTFAPRLAVTLWFYGRQLGLPASPSTRRPRSVPPLPAPERQLAAGDDTRDKVRALPSPTGSGAAHAAEASIFVSVVSYRDSEVNPTVVDLFARASNPGRVDVGLVWQLEEGVAEDEAMRRATP---GGKEIRGGRVRSLFMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKPVLTTYPVGYQLPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAILVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQQNSTKEAEAEEAAANRRLRWLL 1095
            WD+ P LD LV+FRS  VEHEVLP F  R+A+T W+YG                 PP P+P                  +P  S      + SIFV++ SYRD E  PTV+DLF +AS+P R+ VG+  Q E    ++  +R A     G +  R  ++R  ++  ++AAGP  AR  AQSLW GE+Y LQIDSH RFR  WDS+LI  L  CPS K VLTTYP+GY LP  I + ++RPTLL    F  DG LRQ  + L +KA  PLPS  WA+GF+FS+S ++ EVPYD  LR  FFGEE+SM+AR++T GWDFFAP +  +YHLW+R +R  F Q+  TKE       + RR+  LL
Sbjct:  265 WDVAPRLDTLVVFRSTDVEHEVLPAFHERMALTTWYYG----------------PPPSPSPS---------------CVAPATSRVERKTDGSIFVAIPSYRDPECAPTVIDLFRKASDPSRLSVGICLQSENEHKDELKLREAVASALGERSPRPEQLRIRWLHFSEAAGPCVARAEAQSLWTGEQYYLQIDSHMRFRDAWDSFLIDELHRCPSHKAVLTTYPLGYTLPDHI-SSDSRPTLLCASRFDEDGTLRQASKTLAKKADSPLPSLFWAAGFAFSSSQVVEEVPYDASLRFLFFGEESSMSARLWTHGWDFFAPREMPIYHLWSRAYRPVF-QELETKERRQTREESLRRVADLL 592          
BLAST of mRNA_Ecto-sp13_S_contig20233.6646.1 vs. uniprot
Match: A0A485KTR2_9STRA (Procollagen-lysine 5-dioxygenase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTR2_9STRA)

HSP 1 Score: 295 bits (754), Expect = 1.780e-90
Identity = 178/389 (45.76%), Postives = 230/389 (59.13%), Query Frame = 1
Query:   22 WDIEPVLDRLVLFRSDLVEHEVLPTFAPRLAVTLWFY--GRQLGLPASPSTRRPRSVPPLPAPERQLAAG-------DDTRD------KVRALPSPTGSGAAHAAEASIFVSVVSYRDSEVNPTVVDLFARASNPGRVDVGLVWQLEEGVAEDEAMRRATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTR-------FRPGWDSYLIHTLQSCPSFKPVLTTYPVGYQLPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAILVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQQNSTKEAEAEEAAANRRLRWLLGXXXTTPSS 1122
            WD+ P LD L+LFRS  VEHEVLPT   RLA+T WFY       +P +  T  P S     AP+    A        DD++         RA P PT    + + + +IFVS+ S+RDSE  PT+  LFA A+ P RV VGL   L+    +D A         +  G +VR   M   DA GP  AR  AQ LW+GE+Y LQIDSH R       FRP WD+YL+  L  C + KP+LTTYP+GY LP++IP+ +TRPTLL    F   G+LRQTG++L      PLP   WA+GF+FS + ++  VPYDP L H FFGEE SMAAR++T G+DFFAPP+AVVYHLW+R HR  F  Q++   AE E+AA+  R++ LL      P++
Sbjct:  243 WDVPPRLDTLLLFRSTDVEHEVLPTTVDRLALTTWFYCNADDANIPHTTRTANPASATAAAAPKTFPRASRPPCIRSDDSQPLDVDMAPRRAPPLPTS--ISPSPDDTIFVSIPSFRDSECAPTLQHLFATAACPARVVVGLC--LQHADDDDTAF-------VDKYGAQVRVTRMHHTDATGPCLARHAAQQLWRGERYHLQIDSHMRYESLVRSFRPHWDAYLVEQLHRCDATKPILTTYPMGYHLPNQIPS-DTRPTLLCASHFDTHGLLRQTGKVLKVSPPRPLPCSFWAAGFAFSEATVIQHVPYDPSLSHLFFGEENSMAARLWTHGYDFFAPPEAVVYHLWSRAHRPVF--QDTRPTAEKEKAASLARVQRLLAGQDDNPTT 617          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20233.6646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNT7_ECTSI6.730e-25095.34Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpu... [more]
A0A6H5L271_9PHAE9.190e-23394.17Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpu... [more]
A0A835YQS0_9STRA1.920e-10849.23Procollagen-lysine 5-dioxygenase (Fragment) n=1 Ta... [more]
A0A833TAL9_PHYIN4.010e-9549.26Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophth... [more]
A0A7S2SW69_9STRA1.140e-9345.36Procollagen-lysine 5-dioxygenase n=2 Tax=Rhizochro... [more]
A0A662X1I4_9STRA5.250e-9346.94P4Hc domain-containing protein n=1 Tax=Nothophytop... [more]
A0A329RXD0_9STRA7.120e-9348.43Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophth... [more]
W2QK95_PHYPN1.500e-9146.44Procollagen-lysine 5-dioxygenase n=9 Tax=Phytophth... [more]
A0A2D4C2G2_PYTIN1.420e-9045.98Procollagen-lysine 5-dioxygenase n=1 Tax=Pythium i... [more]
A0A485KTR2_9STRA1.780e-9045.76Procollagen-lysine 5-dioxygenase n=1 Tax=Aphanomyc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig20233contigEcto-sp13_S_contig20233:5..3159 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score704.9
Seed ortholog evalue2e-200
Seed eggNOG ortholog2880.D7FNT7
Model size1128
KEGG koko:K12244
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.peptidyl-proline hydroxylation to 4-hydroxy-L-proline
EggNOG OGsKOG3710@1,KOG3710@2759
EC2.4.1.229
Cds size1128
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01003
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig20233.6646.1prot_Ecto-sp13_S_contig20233.6646.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig20233 5..3159 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463016.9106257-CDS-Ecto-sp13_S_contig20233:4..1031681463016.9106257-CDS-Ecto-sp13_S_contig20233:4..103Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig20233 5..103 -
1681463016.920509-CDS-Ecto-sp13_S_contig20233:525..6781681463016.920509-CDS-Ecto-sp13_S_contig20233:525..678Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig20233 526..678 -
1681463016.9289289-CDS-Ecto-sp13_S_contig20233:1162..14241681463016.9289289-CDS-Ecto-sp13_S_contig20233:1162..1424Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig20233 1163..1424 -
1681463016.938826-CDS-Ecto-sp13_S_contig20233:1932..22521681463016.938826-CDS-Ecto-sp13_S_contig20233:1932..2252Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig20233 1933..2252 -
1681463016.95994-CDS-Ecto-sp13_S_contig20233:2491..27011681463016.95994-CDS-Ecto-sp13_S_contig20233:2491..2701Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig20233 2492..2701 -
1681463016.9697623-CDS-Ecto-sp13_S_contig20233:3075..31591681463016.9697623-CDS-Ecto-sp13_S_contig20233:3075..3159Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig20233 3076..3159 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig20233.6646.1

>prot_Ecto-sp13_S_contig20233.6646.1 ID=prot_Ecto-sp13_S_contig20233.6646.1|Name=mRNA_Ecto-sp13_S_contig20233.6646.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=376bp
EEKAGRKWDIEPVLDRLVLFRSDLVEHEVLPTFAPRLAVTLWFYGRQLGL
PASPSTRRPRSVPPLPAPERQLAAGDDTRDKVRALPSPTGSGAAHAAEAS
IFVSVVSYRDSEVNPTVVDLFARASNPGRVDVGLVWQLEEGVAEDEAMRR
ATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHT
RFRPGWDSYLIHTLQSCPSFKPVLTTYPVGYQLPHKIPAGETRPTLLVPD
GFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAILVEVPYDPGLR
HSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQQNSTKEA
EAEEAAANRRLRWLLGGGGTTPSSSP
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mRNA from alignment at Ecto-sp13_S_contig20233:5..3159-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig20233.6646.1 ID=mRNA_Ecto-sp13_S_contig20233.6646.1|Name=mRNA_Ecto-sp13_S_contig20233.6646.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3155bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20233:5..3159- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGAGAAGGCCGGCCGCAAGTGGGACATCGAGCCGGTGTTGGACCGCCT GGTGCTCTTTCGCAGCGACCTCGTGGAGCACGAAGTGAGAAAGTGTTCTT AGTGTCTAGTGGTTCGTGGAAGGGTGTCCTTGGGCCAGGACGTCAAAGCT GTTTAGTTTTGTGAAGGAAAAATCAAATTCGGTTAATGGCCTCTTGTTTG CCGTATGGTGACGTAGATTGTATCGTTTTCTTCGTAACCACATCATGCGA GGAGTCCACGAGTCTAATGAATCGGGGCGTGTAAACAAGAAACGTACATT ATTTACTTTGTAGTACTAGAGGACGGCCCTCCGCCCCCAACCCCCCTAGA CTCGTATTCCTACAAGCAACGCTCCCTCCCCCACGCCGCAGCGCGAGCAA TGAGAAAATAATTGTACCTACTCCGTCCCCCCCTCCCCCCCCCTCTCCAC GTTTGCAGGTGCTACCGACGTTCGCCCCTCGACTTGCCGTCACCCTTTGG TTCTACGGCAGACAGCTGGGACTCCCGGCGTCGCCCTCAACGCGAAGGCC GCGGTCGGTCCCACCACTCCCAGCTCCGGAGCGGCAGCTGGCGGCGGGAG ACGACACCCGCGACAAAGTTCGCGCGCTCCCGTCGCCCACCGGGAGTGGC GCGGCGCACGCAGCCGAGGTGAGCCTTGGATTTTCCGACGTCTCGGGGTG GTTAGGAGGAAGAGGTGTCTGTGTATGTGTGTGTGCAGGAGGTTGTGGCG ATATAAGCTGTGGCCGCGTGCACTCAAGATCAAAAGCGGCCCTCTGTATC TCGAGGTACTAGCCCTTGCCTTGACGTTAGCACAAGGGACCTCCCCCTCT CCTTGGCCGCCGCTTCGCGCCGCACCATCTCTCCCGGCGTCGTCCCCTTT TCACCAGGCCTCGATATTCGTGAGCGTCGTTAGCTACCGAGACTCGGAGG TGAACCCTACCGTAGTCGACCTGTTCGCTCGCGCTTCCAATCCGGGGCGA GTGGACGTGGGTCTGGTGTGGCAGCTAGAGGAGGGTGTTGCGGAAGACGA GGCGATGCGCCGGGCAACGCCCGGGGGCAAGGAGATCAGGGGTGGGCGGG TGCGGTCGTTGTTTATGCCGGCGGCGGACGCGGCGGGTCCTTCCTGGGCC CGGCGGGTGGCGCAGTCTCTGTGGAAGGGGGAGAAGTACGTGCTGCAGAT CGACAGCCACACACGGTTTCGGCCTGGGTGAGCGAGGGGAGACCGGGAGC GGCTTGCGCTCCATCTGTTTCGTGATTCTGTCAGGATTATGATTAATCTT TCTCGCTCTTCATAAGTATCGCCGTCAGTGGTTCGTCTTTGAGAACCTGT AGAGTTGACAAGCCGCTGATCGCGTCAAGACGAGGCTAGACTTGTATGTA CTGGATCAACGGCGGGTTGAAAAGGTATTGTGTACAGGCAAGCTCGGTTC AACGCTCAAGTTATTAGGCTCGCTTAGCGCGATCTGGAACACCCAAGAAC ATCAAAGGAGGCTGGAATCCCCCCGACCCCCGCCTGCCACTATCCTATGA ACATGGATGGCAACGAATGTGAGTATCGCGAAATTTTGCTAGGCGTTTAC GCGGAAGTAAGATTCAAAACGAAAACTCAGCCGTCTCGAGAGACGGTCAA TTCGAAATCCCAGACAGAAAGACAACAACACGAGCCCCCCCCCCCCGCCC CCTCCCGCCGGGCTCCCTTCTGCTTACCGCCGTAGCTGGGACTCCTACCT CATCCACACCCTGCAGAGCTGCCCGTCCTTCAAGCCGGTCCTAACCACGT ACCCGGTGGGGTACCAGCTGCCGCACAAGATCCCGGCGGGGGAGACCAGG CCGACGCTGCTTGTCCCCGACGGCTTCGGGCCGGACGGTATGCTGCGCCA GACGGGCAGGCTACTCCTGCGGAAGGCGCGCGACCCGCTGCCTTCTCCGC TGTGGGCCTCGGGGTTCAGCTTCAGCGCGAGCGCTATCCTCGTCGAGGTC AGCAGTATTGTCTTACGCCTGTTTTCAGCACGCTGCTGCTGCTGCTGCTG CTGCGTGGTCGGTGTTCGTCTTTTTGGTCCGACACTCTCGAACCTCCGGA GCGGAAGGGGGTAGGTGGGTGGGGGGACCTGGCGTGTCCCGGGCTGGCTG CCGACAGGAAAGACTGCCCGTATGGGGCGGTGTGCGTCCCTGCGTTTGTT GCGGTGCGCTCGGCAAGCTAGCTTGTTGGTGAGGATCGCGAGGCGACACG CGCGTTGTGCGGCAACGCGTGCACACGCTCCTTGTGCCACATTCTCCCTC CCAAGATACCTTTGAGCGGTTCGCGACACACAGACACACACACAAAACAA GCACACCATCACAGATCCGCCGCTTAGAACGCTTAGAACGAAGCCTGGTT CTTGACCGCTCGTGCGGGCGCCATGTGCTCACTCCGACACACACTTGCTC CACCAACTCGTTGCCCGACCCCGCCTTGCAGGTGCCCTACGACCCGGGTC TCAGGCACTCATTTTTCGGTGAAGAGGCCTCCATGGCGGCGCGCATGTTC ACCCGGGGTTGGGACTTCTTCGCCCCCCCACAGGCGGTGGTGTATCACCT TTGGACCAGAGGGCACCGTGCCAGCTTTCGGCAGGTGACATTCTGTCATG GCGCGGCGCAATGTTACCAGAGGTTTAAGGTTTCGACCACGGACGATGGC ATAGTTTTGTTCACTAGCGAGTCAAACGTCGGTCCGTAACAAAGATTCCC CGAAGTTTCCTGGTGGGGCGAAAATTGAAGCGCGGACAAACTTCGGAGTA GAAACGTAGAGTCGGAAGTGTTAGTTCCTCGTCCCTTCTGGCAACGGTGC TTGCAAACTTGTGTGGAAGAGAGTCTTGAGGGATTGATCAATTGTCGTGC AGGAAGCTAGGCGGCGCTTGCGGCAAGTCCATCTGCATCTCGCCTTCGGC GTCTTGAGCATCGCACGCTACCGTAACAAGCAGATAACGCTTCTCCTTGG TGCGAACCACCGAACGAACGAACGAACGAACGAACGAACGAACGGACGGT TGCAAGCAGAACTCAACGAAAGAGGCCGAGGCGGAAGAGGCCGCCGCGAA TCGTCGGCTCCGCTGGCTGCTTGGTGGCGGCGGCACCACCCCTTCTTCGT CGCCT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20233:5..3159-

>mRNA_Ecto-sp13_S_contig20233.6646.1 ID=mRNA_Ecto-sp13_S_contig20233.6646.1|Name=mRNA_Ecto-sp13_S_contig20233.6646.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1128bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20233:5..3159- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGAGAAGGCCGGCCGCAAGTGGGACATCGAGCCGGTGTTGGACCGCCT
GGTGCTCTTTCGCAGCGACCTCGTGGAGCACGAAGTGCTACCGACGTTCG
CCCCTCGACTTGCCGTCACCCTTTGGTTCTACGGCAGACAGCTGGGACTC
CCGGCGTCGCCCTCAACGCGAAGGCCGCGGTCGGTCCCACCACTCCCAGC
TCCGGAGCGGCAGCTGGCGGCGGGAGACGACACCCGCGACAAAGTTCGCG
CGCTCCCGTCGCCCACCGGGAGTGGCGCGGCGCACGCAGCCGAGGCCTCG
ATATTCGTGAGCGTCGTTAGCTACCGAGACTCGGAGGTGAACCCTACCGT
AGTCGACCTGTTCGCTCGCGCTTCCAATCCGGGGCGAGTGGACGTGGGTC
TGGTGTGGCAGCTAGAGGAGGGTGTTGCGGAAGACGAGGCGATGCGCCGG
GCAACGCCCGGGGGCAAGGAGATCAGGGGTGGGCGGGTGCGGTCGTTGTT
TATGCCGGCGGCGGACGCGGCGGGTCCTTCCTGGGCCCGGCGGGTGGCGC
AGTCTCTGTGGAAGGGGGAGAAGTACGTGCTGCAGATCGACAGCCACACA
CGGTTTCGGCCTGGCTGGGACTCCTACCTCATCCACACCCTGCAGAGCTG
CCCGTCCTTCAAGCCGGTCCTAACCACGTACCCGGTGGGGTACCAGCTGC
CGCACAAGATCCCGGCGGGGGAGACCAGGCCGACGCTGCTTGTCCCCGAC
GGCTTCGGGCCGGACGGTATGCTGCGCCAGACGGGCAGGCTACTCCTGCG
GAAGGCGCGCGACCCGCTGCCTTCTCCGCTGTGGGCCTCGGGGTTCAGCT
TCAGCGCGAGCGCTATCCTCGTCGAGGTGCCCTACGACCCGGGTCTCAGG
CACTCATTTTTCGGTGAAGAGGCCTCCATGGCGGCGCGCATGTTCACCCG
GGGTTGGGACTTCTTCGCCCCCCCACAGGCGGTGGTGTATCACCTTTGGA
CCAGAGGGCACCGTGCCAGCTTTCGGCAGCAGAACTCAACGAAAGAGGCC
GAGGCGGAAGAGGCCGCCGCGAATCGTCGGCTCCGCTGGCTGCTTGGTGG
CGGCGGCACCACCCCTTCTTCGTCGCCT
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