mRNA_Ecto-sp13_S_contig20227.6644.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20227.6644.1 vs. uniprot
Match: D8LEL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL0_ECTSI) HSP 1 Score: 146 bits (368), Expect = 7.660e-42 Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 1
Query: 1 QCWCGSDGADYALHGESNDCTYPCSGDAAQTCGGFDVANVYLYTGENTSTSSLVGCYQDESDARIMEFALTDTSSMTM 234
+CWCGSDGADYALHGES +CTYPCSGDA Q CGGFD ANVYL+TGE TSTSSLVGCYQDESDARIMEFALTDTSSMTM
Sbjct: 140 ECWCGSDGADYALHGESTECTYPCSGDADQLCGGFDAANVYLFTGE-TSTSSLVGCYQDESDARIMEFALTDTSSMTM 216
BLAST of mRNA_Ecto-sp13_S_contig20227.6644.1 vs. uniprot
Match: D7FUE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE8_ECTSI) HSP 1 Score: 130 bits (326), Expect = 7.400e-37 Identity = 60/77 (77.92%), Postives = 66/77 (85.71%), Query Frame = 1
Query: 1 QCWCGSDGADYALHGESNDCTYPCSGDAAQTCGGFDVANVYLYTGENTSTSSLVGCYQDESDARIMEFALTDTSSMT 231
+CWCGS G DYALHGES DCTY C+G+A QTCGGFD ANVY YT E+T TSS VGCYQDESDAR+ME ALTD+SSMT
Sbjct: 23 ECWCGSAGMDYALHGESTDCTYGCAGNADQTCGGFDAANVYRYTNESTPTSSFVGCYQDESDARMMELALTDSSSMT 99
BLAST of mRNA_Ecto-sp13_S_contig20227.6644.1 vs. uniprot
Match: D7FRS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS2_ECTSI) HSP 1 Score: 131 bits (330), Expect = 1.970e-34 Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 1
Query: 1 QCWCGSDGADYALHGESNDCTYPCSGDAAQTCGGFDVANVYLYTGENT-STSSLVGCYQDESDARIMEFALTDTSSMT 231
+CWCGS GADY LHGES DCTY C+GDA QTCGGFD ANVYLYTG++ STS+ VGCYQDESDARIME ALTD+SSMT
Sbjct: 373 ECWCGSAGADYTLHGESTDCTYACAGDADQTCGGFDAANVYLYTGDDALSTSTFVGCYQDESDARIMELALTDSSSMT 450
BLAST of mRNA_Ecto-sp13_S_contig20227.6644.1 vs. uniprot
Match: D7FUE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE6_ECTSI) HSP 1 Score: 132 bits (331), Expect = 4.870e-34 Identity = 61/77 (79.22%), Postives = 66/77 (85.71%), Query Frame = 1
Query: 1 QCWCGSDGADYALHGESNDCTYPCSGDAAQTCGGFDVANVYLYTGENTSTSSLVGCYQDESDARIMEFALTDTSSMT 231
+CWCGS G +YALHGES DCTY C+GDA QTCGGFD ANVY YT E+T TSS VGCYQDESDARIME ALTD+SSMT
Sbjct: 678 ECWCGSAGVEYALHGESTDCTYACAGDADQTCGGFDAANVYRYTDESTPTSSFVGCYQDESDARIMELALTDSSSMT 754
BLAST of mRNA_Ecto-sp13_S_contig20227.6644.1 vs. uniprot
Match: D7FRS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS1_ECTSI) HSP 1 Score: 130 bits (327), Expect = 1.730e-33 Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 1
Query: 1 QCWCGSDGADYALHGESNDCTYPCSGDAAQTCGGFDVANVYLYTGENT-STSSLVGCYQDESDARIMEFALTDTSSMT 231
+CWCGS GADY LHGES DCTY C+GDA QTCGGFD ANVYLYTG++ +TSS VGCYQDESDARIME ALTD+SSMT
Sbjct: 788 ECWCGSAGADYILHGESADCTYACAGDADQTCGGFDAANVYLYTGDDVPTTSSFVGCYQDESDARIMELALTDSSSMT 865
BLAST of mRNA_Ecto-sp13_S_contig20227.6644.1 vs. uniprot
Match: D7FTD7_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD7_ECTSI) HSP 1 Score: 124 bits (311), Expect = 2.300e-32 Identity = 57/78 (73.08%), Postives = 65/78 (83.33%), Query Frame = 1
Query: 1 QCWCGSDGADYALHGESNDCTYPCSGDAAQTCGGFDVANVYLYTGENTSTSSLVGCYQDESDARIMEFALTDTSSMTM 234
+CWCGS DYALHGES DCTY C+GDA QTCGGFD ANVY YT E+T+ S+ VGCYQDES +RIME ALTD+SSM+M
Sbjct: 251 ECWCGSADMDYALHGESTDCTYACAGDADQTCGGFDAANVYSYTDESTAISAFVGCYQDESGSRIMELALTDSSSMSM 328
BLAST of mRNA_Ecto-sp13_S_contig20227.6644.1 vs. uniprot
Match: A0A6H5JX48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX48_9PHAE) HSP 1 Score: 100 bits (248), Expect = 8.040e-23 Identity = 48/87 (55.17%), Postives = 59/87 (67.82%), Query Frame = 1
Query: 1 QCWCGSDGADYALHGESNDCTYPCSGDAAQTCGGFDVANVYLYTGENTSTSS----------LVGCYQDESDARIMEFALTDTSSMT 231
+CWCGS GADYALHGES DCTYPC+GDA Q CGGFD ANVY YT +T + + +GCY+D+ + RIM+ + SSMT
Sbjct: 604 ECWCGSAGADYALHGESTDCTYPCAGDADQMCGGFDAANVYRYTDGSTPSPTPSPTEAGSHLALGCYEDDREDRIMDELVLSDSSMT 690
BLAST of mRNA_Ecto-sp13_S_contig20227.6644.1 vs. uniprot
Match: D8LNS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS1_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 3.970e-21 Identity = 47/78 (60.26%), Postives = 56/78 (71.79%), Query Frame = 1
Query: 1 QCWCGSDGADYALHGESNDCTYPCSGDAAQTCGGFDVANVYLY-TGENTSTSSLVGCYQDESDARIMEFALTDTSSMT 231
+CWCG G DY HGES +CTY C G+ +TCGGF A+VY Y T E T T S VGC+QD+ D RIME ALT++SSMT
Sbjct: 172 ECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYSTVEPTPTFSYVGCFQDDQD-RIMELALTESSSMT 248
BLAST of mRNA_Ecto-sp13_S_contig20227.6644.1 vs. uniprot
Match: D8LEK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK9_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 4.520e-21 Identity = 46/87 (52.87%), Postives = 56/87 (64.37%), Query Frame = 1
Query: 1 QCWCGSDGADYALHGESNDCTYPCSGDAAQTCGGFDVANVYLYTGENTSTSS----------LVGCYQDESDARIMEFALTDTSSMT 231
+CWCGS GADYALHGES DCTY CSGD QTCGGFD ANVY Y ++T + + +GCY D+ + RIM+ + SMT
Sbjct: 351 ECWCGSAGADYALHGESTDCTYACSGDTDQTCGGFDAANVYRYPDDSTPSPTPSPTEAASFVALGCYGDDREDRIMDELVLSDPSMT 437
BLAST of mRNA_Ecto-sp13_S_contig20227.6644.1 vs. uniprot
Match: D7FTD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD8_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 1.460e-18 Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 1
Query: 76 GDAAQTCGGFDVANVYLYTGENTSTSSLVGCYQDESDARIMEFALTDTSSMTM 234
GDA QTCGGFD ANVY YT N TSS VGCYQDESDARIME ALTD+SSMTM
Sbjct: 352 GDADQTCGGFDAANVYQYTDGNAPTSSFVGCYQDESDARIMELALTDSSSMTM 404 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20227.6644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20227.6644.1 >prot_Ecto-sp13_S_contig20227.6644.1 ID=prot_Ecto-sp13_S_contig20227.6644.1|Name=mRNA_Ecto-sp13_S_contig20227.6644.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=78bp QCWCGSDGADYALHGESNDCTYPCSGDAAQTCGGFDVANVYLYTGENTSTback to top mRNA from alignment at Ecto-sp13_S_contig20227:943..1176+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20227.6644.1 ID=mRNA_Ecto-sp13_S_contig20227.6644.1|Name=mRNA_Ecto-sp13_S_contig20227.6644.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=234bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20227:943..1176+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20227:943..1176+ >mRNA_Ecto-sp13_S_contig20227.6644.1 ID=mRNA_Ecto-sp13_S_contig20227.6644.1|Name=mRNA_Ecto-sp13_S_contig20227.6644.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=234bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20227:943..1176+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |