mRNA_Ecto-sp13_S_contig20215.6638.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20215.6638.1 vs. uniprot
Match: A0A6H5KST8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST8_9PHAE) HSP 1 Score: 131 bits (330), Expect = 3.450e-34 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1
Query: 1 YVSQNLHHWIDLIFGYKQRGPAAEKAHNVFYYLTYSGAVDLANIQDEGLRRATELQIAHFGQ 186
YVSQNLHHWIDLIFGYKQRGPAAEKAHNVFYYLTYSGAVDLANIQDEGLRRATELQIAHFGQ
Sbjct: 1984 YVSQNLHHWIDLIFGYKQRGPAAEKAHNVFYYLTYSGAVDLANIQDEGLRRATELQIAHFGQ 2045
BLAST of mRNA_Ecto-sp13_S_contig20215.6638.1 vs. uniprot
Match: A0A835ZH49_9STRA (BEACH domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH49_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.480e-25 Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 1
Query: 1 YVSQNLHHWIDLIFGYKQRGPAAEKAHNVFYYLTYSGAVDLANIQDEGLRRATELQIAHFGQ 186
+VS+NLHHWIDLIFG+KQ+G AA AHNVFYYLTY GA+DL I+D+ LRRATELQIAHFGQ
Sbjct: 282 HVSENLHHWIDLIFGHKQQGQAAVDAHNVFYYLTYYGAIDLTKIRDDALRRATELQIAHFGQ 343
BLAST of mRNA_Ecto-sp13_S_contig20215.6638.1 vs. uniprot
Match: A0A7S2WRZ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WRZ9_9STRA) HSP 1 Score: 102 bits (253), Expect = 8.680e-24 Identity = 46/62 (74.19%), Postives = 54/62 (87.10%), Query Frame = 1
Query: 1 YVSQNLHHWIDLIFGYKQRGPAAEKAHNVFYYLTYSGAVDLANIQDEGLRRATELQIAHFGQ 186
+VS LHHWIDLIFGY+QRG AA +AHNVFYYLTY+G VD++ I+D +RRATELQIAHFGQ
Sbjct: 695 HVSSQLHHWIDLIFGYQQRGQAAVQAHNVFYYLTYAGCVDISQIEDPVMRRATELQIAHFGQ 756
BLAST of mRNA_Ecto-sp13_S_contig20215.6638.1 vs. uniprot
Match: A0A7S0NBQ1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0NBQ1_9CRYP) HSP 1 Score: 93.6 bits (231), Expect = 2.860e-23 Identity = 45/62 (72.58%), Postives = 48/62 (77.42%), Query Frame = 1
Query: 1 YVSQNLHHWIDLIFGYKQRGPAAEKAHNVFYYLTYSGAVDLANIQDEGLRRATELQIAHFGQ 186
+VS NLHHWIDLIFG KQRGPAAE+A NVFYYLTY G DL I D GLRR+ E QI FGQ
Sbjct: 15 FVSANLHHWIDLIFGCKQRGPAAEEAVNVFYYLTYEGGADLDAIADPGLRRSAEAQIRSFGQ 76
BLAST of mRNA_Ecto-sp13_S_contig20215.6638.1 vs. uniprot
Match: A0A482SZ90_9ARCH (DUF4704 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SZ90_9ARCH) HSP 1 Score: 99.8 bits (247), Expect = 5.640e-23 Identity = 48/62 (77.42%), Postives = 53/62 (85.48%), Query Frame = 1
Query: 1 YVSQNLHHWIDLIFGYKQRGPAAEKAHNVFYYLTYSGAVDLANIQDEGLRRATELQIAHFGQ 186
YV+++LH WIDLIFGYKQRGP A +A NVFYYLTY GAVD I+DE LRRATELQIAHFGQ
Sbjct: 1939 YVTEHLHEWIDLIFGYKQRGPDAVEAKNVFYYLTYYGAVDHYMIEDETLRRATELQIAHFGQ 2000
BLAST of mRNA_Ecto-sp13_S_contig20215.6638.1 vs. uniprot
Match: A0A812SF29_SYMMI (LvsC protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SF29_SYMMI) HSP 1 Score: 96.3 bits (238), Expect = 1.080e-22 Identity = 46/62 (74.19%), Postives = 51/62 (82.26%), Query Frame = 1
Query: 1 YVSQNLHHWIDLIFGYKQRGPAAEKAHNVFYYLTYSGAVDLANIQDEGLRRATELQIAHFGQ 186
YVS +LH WIDLIFGYKQRGPAA +AHNVFYYLTY GAV+ I DE R+A +LQIAHFGQ
Sbjct: 217 YVSAHLHEWIDLIFGYKQRGPAAVEAHNVFYYLTYYGAVNRDIIVDEATRKAIDLQIAHFGQ 278
BLAST of mRNA_Ecto-sp13_S_contig20215.6638.1 vs. uniprot
Match: A0A7S3MHR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHR3_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.480e-22 Identity = 46/62 (74.19%), Postives = 53/62 (85.48%), Query Frame = 1
Query: 1 YVSQNLHHWIDLIFGYKQRGPAAEKAHNVFYYLTYSGAVDLANIQDEGLRRATELQIAHFGQ 186
YV+ +LH WIDLIFGYKQRGP A +A+NVFYYLTY G+V+ I+DE LRRATELQIAHFGQ
Sbjct: 137 YVTTHLHEWIDLIFGYKQRGPDAVEANNVFYYLTYYGSVNHYMIKDESLRRATELQIAHFGQ 198
BLAST of mRNA_Ecto-sp13_S_contig20215.6638.1 vs. uniprot
Match: M2Y8Y9_GALSU (WD-40 repeat family protein / beige-related protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y8Y9_GALSU) HSP 1 Score: 97.4 bits (241), Expect = 3.660e-22 Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 1
Query: 1 YVSQNLHHWIDLIFGYKQRGPAAEKAHNVFYYLTYSGAVDLANIQDEGLRRATELQIAHFGQ 186
YVS NLHHWIDLIFG++QRGPAA +A NVF+YLTY GA+DL +IQD LR + E QIAHFGQ
Sbjct: 2756 YVSLNLHHWIDLIFGFRQRGPAAVEACNVFFYLTYEGAIDLESIQDMELRESMETQIAHFGQ 2817
BLAST of mRNA_Ecto-sp13_S_contig20215.6638.1 vs. uniprot
Match: A0A7R9W3F5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3F5_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 6.270e-22 Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 1
Query: 1 YVSQNLHHWIDLIFGYKQRGPAAEKAHNVFYYLTYSGAVDLANIQDEGLRRATELQIAHFGQ 186
YVS NL+HW+DLIFGYKQRGP A AHN+F+YL+Y G+VDL I DE R+ATE I +FGQ
Sbjct: 7 YVSANLNHWVDLIFGYKQRGPEAAAAHNIFHYLSYEGSVDLDKITDEVDRKATESHIQNFGQ 68
BLAST of mRNA_Ecto-sp13_S_contig20215.6638.1 vs. uniprot
Match: A0A1Y5IG54_OSTTA (Lysosomal trafficking regulator LYST and related beach and WD40 repeat protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IG54_OSTTA) HSP 1 Score: 96.7 bits (239), Expect = 6.810e-22 Identity = 45/62 (72.58%), Postives = 53/62 (85.48%), Query Frame = 1
Query: 1 YVSQNLHHWIDLIFGYKQRGPAAEKAHNVFYYLTYSGAVDLANIQDEGLRRATELQIAHFGQ 186
+VS+NLHHWIDLIFGYKQRG AAE AHNVFYY+TY GAVD+ +IQD L +AT+ QI+ FGQ
Sbjct: 1992 HVSKNLHHWIDLIFGYKQRGKAAESAHNVFYYMTYEGAVDVESIQDPVLLKATQDQISCFGQ 2053 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20215.6638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20215.6638.1 >prot_Ecto-sp13_S_contig20215.6638.1 ID=prot_Ecto-sp13_S_contig20215.6638.1|Name=mRNA_Ecto-sp13_S_contig20215.6638.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp YVSQNLHHWIDLIFGYKQRGPAAEKAHNVFYYLTYSGAVDLANIQDEGLRback to top mRNA from alignment at Ecto-sp13_S_contig20215:2614..2799+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20215.6638.1 ID=mRNA_Ecto-sp13_S_contig20215.6638.1|Name=mRNA_Ecto-sp13_S_contig20215.6638.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=186bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20215:2614..2799+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20215:2614..2799+ >mRNA_Ecto-sp13_S_contig20215.6638.1 ID=mRNA_Ecto-sp13_S_contig20215.6638.1|Name=mRNA_Ecto-sp13_S_contig20215.6638.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=186bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20215:2614..2799+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |