mRNA_Ecto-sp13_S_contig20211.6637.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20211.6637.1 vs. uniprot
Match: A0A6H5K7B0_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B0_9PHAE) HSP 1 Score: 550 bits (1418), Expect = 4.160e-190 Identity = 421/542 (77.68%), Postives = 426/542 (78.60%), Query Frame = 1
Query: 22 MDGGRQPNPPPPHPARASTGAQNLETHVAKPQPAGGGSQLPGGATRRSVSCDRHNAKREAPRSPSTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP-LHRTARAPSLPTESSSSITGALRRYVSADQMPSAADAXXXXXXXDDLSPAEALPTRSVFIATAVLVGKRNQQRHRXXXXXXXXR--TSPNWRGKEXXXXXXXXXXXXXXXXXXXASRTPSPSLTRRVWASASPRFGSVGGCVGGEXXXXXXXXXXXXXXXXXXXXXXGGVTEGADPVALWRSYGRDDGVKGGSIARATAAAAGTEQRAKTPATTVSPTARFYDYWRHCNFRPASTVRSATKDMADDILSTAGEDDGKITVPAPLDPVTSARAAPLTPATKRSRGLPAGQGGGLVAGGGDGGPGNVEXXXXXXXXXXXXXXXXXXXXXXAKARTAFXXXXXAERRTEDAKLRLGELS------------------------------------RCADCGAPCADWASVAHGSFVCLKCAGQYRSLGMHVIFTRSLVMDKWTG 1530
MDGGRQPNPPPP PARAS G QNLETHVAKPQPAGGGSQLP GATRRSVSC HN KREA RSPSTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LHRTARAPSLP ESSSSITGA QMPSAA A DLSPAEALPTRSVFIATAVLVGKRNQ XXXXXXXX TSPNWRGKE XXXXXXXXXXX ASRTPSPSLTRRVWAS S RFGS G C GGE XXXXXXXXXXXXXXXXXXXXXGGV EGADPVALWRSYGRDD VKGGSIARATAA A EQ+AK PATTVSPTARFYDYWRHCNFR ASTVRSATK+MADDILSTAGED+ KI VPAPLDPVTSARAAPL PATKRSRGLPAGQ G LVAGGG+ G GNVE XXXXXXXXXXXXX AKARTAF AERRTEDAKLRLGEL RCADCGAPCADWASVAHGSFVCLKCAGQ+RSLGM VIFTRSLVMDKWTG
Sbjct: 1 MDGGRQPNPPPPRPARASAGVQNLETHVAKPQPAGGGSQLPRGATRRSVSCAGHNVKREARRSPSTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHRTARAPSLPAESSSSITGA--------QMPSAAAANDDDG---DLSPAEALPTRSVFIATAVLVGKRNQXXXXXXXXXXXXXXXTSPNWRGKEEEGGVSRXXXXXXXXXXX-ASRTPSPSLTRRVWASTSSRFGSSGSCGGGEDXXXXXXXXXXXXXXXXXXXXXGGVREGADPVALWRSYGRDDDVKGGSIARATAAEASAEQKAKAPATTVSPTARFYDYWRHCNFRAASTVRSATKNMADDILSTAGEDNEKIAVPAPLDPVTSARAAPLIPATKRSRGLPAGQDGELVAGGGNDGAGNVESESAAXXXXXXXXXXXXXAEAGAKARTAFAAAAVAERRTEDAKLRLGELRSRPDNRQEEARSDCFTALVAPCAWEGAEGGGASGIFRCADCGAPCADWASVAHGSFVCLKCAGQHRSLGMQVIFTRSLVMDKWTG 530
BLAST of mRNA_Ecto-sp13_S_contig20211.6637.1 vs. uniprot
Match: D8LE09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE09_ECTSI) HSP 1 Score: 469 bits (1208), Expect = 4.630e-157 Identity = 330/414 (79.71%), Postives = 337/414 (81.40%), Query Frame = 1
Query: 334 ARAPSLPTESSSSITGALRRYVSADQMPSAADAXXXXXXXD-DLSPAEALPTRSVFIATAVLVGKRNQQRHRXXXXXXXXRTSPNWRGKEXXXXXXXXXXXXXXXXXXX-ASRTPSPSLTRRVWASASPRFGSVGGCVGGEXXXXXXXXXXXXXXXXXXXXXXGGVT------EGADPVALWRSYGRDDGVKGGSIARATAAAAGTEQRAKTPATTVSPTARFYDYWRHCNFRPASTVRSATKDMADDILSTAGEDDGKITVPAPLDPVTSARAAPLTPATKRSRGLPAGQGGGLVAGGGDGGPGNVEXXXXXXXXXXXXXXXXXXXXXXAKARTAFXXXXXAERRTEDAKLRLGEL------SRCADCGAPCADWASVAHGSFVCLKCAGQYRSLGMHVIFTRSLVMDKWTGE 1533
ARAPSLP ESSSSITGALRRY SADQMPS DAXXXXXXXD DLSPAEALPTRSVFIATAVLVGKRN+QRH RTSPNWRGKE XXXXXXXXXXX ASRTPSPSLTRRVWASASPRFG+ GG XXXXXXXXXXXXXXXXXXXXXX EG DPVALWRSY RDDGVKGGS+A ATAAAA EQ+AKTPATTVSP ARFYDYWRHCNFRPAS VRSATKDMADDILSTAGED G+ITVPAPLDPVT ARAAP T ATKRSRG PAGQ G LVAGGG+G GN+E XXXXXXXXXXXXX AKARTAF AERRTEDAKLRLGEL SRCADCGAPCADWASVAHGSFVCLKCAGQ RSLGMHVIFTRSLVMDKWT E
Sbjct: 2 ARAPSLPAESSSSITGALRRYFSADQMPS--DAXXXXXXXDGDLSPAEALPTRSVFIATAVLVGKRNKQRHLQHQQQREERTSPNWRGKEEEGGVSRSXXXXXXXXXXXXASRTPSPSLTRRVWASASPRFGTGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGREGVDPVALWRSYSRDDGVKGGSVAPATAAAASAEQKAKTPATTVSPIARFYDYWRHCNFRPASAVRSATKDMADDILSTAGEDKGRITVPAPLDPVTPARAAPRTLATKRSRGPPAGQDGELVAGGGNGRAGNIESESAAXXXXXXXXXXXXXAEAGAKARTAFAAAAVAERRTEDAKLRLGELRLRPDNSRCADCGAPCADWASVAHGSFVCLKCAGQQRSLGMHVIFTRSLVMDKWTDE 413
BLAST of mRNA_Ecto-sp13_S_contig20211.6637.1 vs. uniprot
Match: A0A4P9XQF2_9FUNG (Arf-GAP domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XQF2_9FUNG) HSP 1 Score: 73.6 bits (179), Expect = 6.640e-12 Identity = 35/62 (56.45%), Postives = 41/62 (66.13%), Query Frame = 1
Query: 1360 KLRLGELSR------CADCGAPCADWASVAHGSFVCLKCAGQYRSLGMHVIFTRSLVMDKWT 1527
K L EL R C DCGAP WASV G+F C+ C+GQ+RSLG+HV F RS+ MDKWT
Sbjct: 7 KKALLELQRREGNRHCIDCGAPNPQWASVTLGTFFCIDCSGQHRSLGVHVSFVRSITMDKWT 68
BLAST of mRNA_Ecto-sp13_S_contig20211.6637.1 vs. uniprot
Match: A0A8H3YES1_9TREE (Arf-GAP domain-containing protein n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3YES1_9TREE) HSP 1 Score: 78.2 bits (191), Expect = 1.000e-11 Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 1363 LRLGELSRCADCGAPCADWASVAHGSFVCLKCAGQYRSLGMHVIFTRSLVMDKWTGE 1533
+ L E +C DCGAP WASV HG+ +CL+C+G +RS G+H+ F RS+ MDKWT E
Sbjct: 14 MALPENKKCVDCGAPSPQWASVQHGTLICLECSGIHRSFGVHISFVRSVTMDKWTEE 70
BLAST of mRNA_Ecto-sp13_S_contig20211.6637.1 vs. uniprot
Match: A0A3F2RPQ2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RPQ2_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.230e-11 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 1357 AKLRLGELSRCADCGAPCADWASVAHGSFVCLKCAGQYRSLGMHVIFTRSLVMDKWTGE 1533
A LR E +CADCGA WA+V HG F+C +CAG +RSLG+HV F S+++DKWT E
Sbjct: 74 AALRRPENDQCADCGASTPKWATVTHGGFICTQCAGVHRSLGVHVSFVLSVMLDKWTNE 132
BLAST of mRNA_Ecto-sp13_S_contig20211.6637.1 vs. uniprot
Match: D0N7A1_PHYIT (ADP-ribosylation factor GTPase-activating protein, putative n=3 Tax=Phytophthora TaxID=4783 RepID=D0N7A1_PHYIT) HSP 1 Score: 77.0 bits (188), Expect = 1.600e-11 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 1357 AKLRLGELSRCADCGAPCADWASVAHGSFVCLKCAGQYRSLGMHVIFTRSLVMDKWTGE 1533
A LR E +CADCGA WA+V HG F+C +CAG +RSLG+HV F S+++DKWT E
Sbjct: 20 AVLRRPENDQCADCGAATPKWATVTHGGFICTQCAGVHRSLGVHVSFVLSVMLDKWTDE 78
BLAST of mRNA_Ecto-sp13_S_contig20211.6637.1 vs. uniprot
Match: W2R0T6_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2R0T6_PHYPN) HSP 1 Score: 77.0 bits (188), Expect = 1.600e-11 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 1357 AKLRLGELSRCADCGAPCADWASVAHGSFVCLKCAGQYRSLGMHVIFTRSLVMDKWTGE 1533
A LR E +CADCGA WA+V HG F+C +CAG +RSLG+HV F S+++DKWT E
Sbjct: 22 AVLRRPENDQCADCGAATPKWATVTHGGFICTQCAGVHRSLGVHVSFVLSVMLDKWTDE 80
BLAST of mRNA_Ecto-sp13_S_contig20211.6637.1 vs. uniprot
Match: A0A2P4YUA2_9STRA (ADP-ribosylation factor GTPase-activating protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YUA2_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.730e-11 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 1357 AKLRLGELSRCADCGAPCADWASVAHGSFVCLKCAGQYRSLGMHVIFTRSLVMDKWTGE 1533
A LR E +CADCGA WA+V HG F+C +CAG +RSLG+HV F S+++DKWT E
Sbjct: 157 AVLRRPENDQCADCGAATPKWATVTHGGFICTQCAGVHRSLGVHVSFVLSVMLDKWTDE 215
BLAST of mRNA_Ecto-sp13_S_contig20211.6637.1 vs. uniprot
Match: A0A0W8C6J3_PHYNI (ADP-ribosylation factor GTPase-activating protein AGD13 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8C6J3_PHYNI) HSP 1 Score: 77.0 bits (188), Expect = 2.730e-11 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 1357 AKLRLGELSRCADCGAPCADWASVAHGSFVCLKCAGQYRSLGMHVIFTRSLVMDKWTGE 1533
A LR E +CADCGA WA+V HG F+C +CAG +RSLG+HV F S+++DKWT E
Sbjct: 160 AVLRRPENDQCADCGAATPKWATVTHGGFICTQCAGVHRSLGVHVSFVLSVMLDKWTDE 218
BLAST of mRNA_Ecto-sp13_S_contig20211.6637.1 vs. uniprot
Match: A0A1U7LLV3_NEOID (Arf-GAP domain-containing protein n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LLV3_NEOID) HSP 1 Score: 75.1 bits (183), Expect = 3.940e-11 Identity = 28/48 (58.33%), Postives = 39/48 (81.25%), Query Frame = 1
Query: 1384 RCADCGAPCADWASVAHGSFVCLKCAGQYRSLGMHVIFTRSLVMDKWT 1527
+CADCGAP WAS+++G F+CL+C+GQ+RSLG H+ F RS+ MD W+
Sbjct: 18 KCADCGAPAPQWASISYGIFICLECSGQHRSLGTHISFVRSVTMDTWS 65 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20211.6637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20211.6637.1 >prot_Ecto-sp13_S_contig20211.6637.1 ID=prot_Ecto-sp13_S_contig20211.6637.1|Name=mRNA_Ecto-sp13_S_contig20211.6637.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=504bp MDGGRQPNPPPPHPARASTGAQNLETHVAKPQPAGGGSQLPGGATRRSVSback to top mRNA from alignment at Ecto-sp13_S_contig20211:340..2144- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20211.6637.1 ID=mRNA_Ecto-sp13_S_contig20211.6637.1|Name=mRNA_Ecto-sp13_S_contig20211.6637.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1805bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20211:340..2144- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20211:340..2144- >mRNA_Ecto-sp13_S_contig20211.6637.1 ID=mRNA_Ecto-sp13_S_contig20211.6637.1|Name=mRNA_Ecto-sp13_S_contig20211.6637.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1512bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20211:340..2144- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |