mRNA_Ecto-sp13_S_contig2021.6635.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig2021.6635.1 vs. uniprot
Match: A0A6H5KKT6_9PHAE (VPS13_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKT6_9PHAE) HSP 1 Score: 2359 bits (6113), Expect = 0.000e+0 Identity = 1343/1559 (86.14%), Postives = 1369/1559 (87.81%), Query Frame = 1
Query: 1 AFPLDEELHVYIAAMQLFPIKLNFSFIKNADVKRLFRLLDQREQEKMEWELLEGRVDGRTKAPPPSLTHGLAASFPRLLLEFVINLTNDISTSPVRLNGMKIPHLWNTPRQLTNSLQSHYIGALLRQLYKIVGSFDFLGDPVGVLSQARAGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKITRSVGGGVAALSFDDEFQRRRINRRREAGGAGGVDRRTGGRGGAPGAARMLVHAVRDLGGGVYHGVTGIAVEPYRRAKEDGARGFVTGVFQGLAGVATKPMVGCLDAVTHTGEAVREMAGGLAAGDAALMAQRARFPQPFGPDGRMMPRTAETACGALLLARFPLWKDRHSYPREATVPTNHLSAATPTGXXXXXXXXKPALTQSMPAVGLAQLESTRMEDVYSPFPEGGGGSGTTAAELLGITEPAPRGGWGSPVSDPGSPQEGFSPTRAKGGRSAVAFGGGGGGMAPLSKEQGRRRSRRDIQEPDFVVSTEFLHRREGQAIILVISNLRVLCVRAYLSRSGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LRGSAITGLELEWQVRLESLTGLPAILDEDGGGTTLDFTYIVGATAGGGGRRRDGRMGLRSTLHRGRMAGIAAVLGNADGLDLSSGHHASGRGVAEGNPTLSAGTSGDGGGSAGRLRPRRVEGLYRDRPALIRAYNVVACLTNQFGRVLLSPGGANVSGSKAVVRSHVLQPAGSAAGGPARDVGRRAANSGXXXXXXXXXSGPGVVSINGWEFGEDPREQLYSMVHAAARNIAVRGWAAPSRFTSPRMAEDRRNGGGGATEALVTRTDAAARGDGLLQRDLWMPLWLLMPQDSFTPADKLRPVPNAFEMDAVVWKPGPFSPETDPGSGWLNMARVAALEAPNHLLRVAVESEPMLDDSAKSLEVKDRFRQGKIDRVEFARLVAELKRTGADRIERRGRRGTAAAGAGVGADSSLAVISAASGLTVSTASSTPGPSQGRDGGAGGVPGRVGGTDVSRDPDGGPAGLKSKRPANSTGMLSKLGGRLVAGLTTASLKADQGSGTNSPAGERARSEAGGVRRLRSPRRGSLFGSPRHESQEPRTSEGSAATAGGSGWRPWTGPGSGSRKSTSDPSYPDRPAPSSAGTGTPVRGGDVPTPSAQRGQAPVASSQLHHLGQGAASAGGAGPLTASEIDQMSSVSTTSTVLTDLSLRMEKIEDLLSKLLEASTGDKGMGXXXXXXXDILQRWGRVAIGQGGGSHDPATRSSEGGTALGVVAAPGSRHSSNVLPEDSAGELMGAVKDTTAELRQVRGRLRQLELEEAAAKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASDGGTSEVIESGGEHFIQGGVRASELPVCGNDSFDEEEEPRPSADGTQPKPSSPTTLGAAHASGQHSPTSSDQEDDGVVGSGPSRKAESSATGXXXXXXXXXXXXXXXXXXVEESEEQGVGMNGGREDETKGEEPXXXXXXXXXXXXXXXXXXXXXXAALQRPMSFGLSPISEAPA 4668
AF LDEELHVYIAAMQLFPIKLNFSFIKNADVK LFRLLDQREQEKMEWELLEGRVDG+TKAPPPSLTHGLAASFPRL LEFVINLTNDISTSPVRLNGMKIPHLWNTPRQLTNSLQSHYIGALLRQLYKIVGSFDFLGDPVG+ AGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTT ITRSVGGGVAALSFD+EFQRRRINRRREAGGAGGVDRRTGGRGGAPGAARMLVHAVRDLGGGVYHGVTGIAVEPYRRAKEDGARGFVTGVFQGLAGVATKPMVGCLDAVTHTGEAVREMAGGLAAGDAALMAQRARFPQPFGPDGRMMPRTAETACGALLLARFPLWKDRHSY REATVPTN LSAATPTGXXXXXXX K ALT+SMPAVGLAQLESTRME VYSPFPEGGGGSGT A+E LGITEPAPRGGWGSPVSDPGSP+EG SPTRAKGGRSAVAFGG GGG+ PL KEQGRRRSRRDI EPDFVVSTE HRREGQ +ILVISNLRVLCVRAYLSRSGGS XXXXXXXXXXXXXXXXXXXXX XXXX LRGSAITGLELEWQ+RLESLTGLPAILDEDGGGTTLDFTYIVGATAGGGGRRRDGRMGLRSTLHRGRMAGIAAVLGNADGLDLSSGHHASGRGVAE PTLSAGTSGD GGS+G+LRPRRVEGLYRDRPALIRAYNVVACLTNQFGRVLLSPGG NVSGSKAVVRSH LQPAGSAA GPARDVGRRAANSGXXXXXXXXX G G+VSINGWEFGEDPREQLYSM HAAAR GWA PSR TSPRMA+DRR+GGGGAT+ALV RTDAAARGDGLLQRDLWMPLWLLMPQDSFTPADKLRPVPNAFEMDAVVWKPGPFSPETDPGSGWLN ARVAALEAPNHLLRVAVESEPMLDDSAKSLEVKDRFRQGKID VEFAR +AELK+TGADRIERRGRRGTAAAGA VGADSSLA ISAA GLTVSTASSTPGPSQGRDGGAGGVPGRVGGTD SRDPDGGPAGLKSKRPANSTGMLSKLGGRLVAGLTTASLKADQGSGTNSPAGERARSEAGGVRRLRSPRRGSLFGSPR E QEPRTSEGSAATAGGSGWRPW+GPGSG+RKSTSDPSYPDRPAPS A TGTPVRGGD PTPSAQR +AP+ASSQLHHLGQGAA DLSLRMEKIEDLLSKLLEASTGDKGMG XXX DILQRWGRVAIGQGGG HDPATRSSEGGTA GVV APGSRHSSNVLPEDSAGELMGAVKDTTAELRQVR RLRQLELEEAAAKV XXXX ASDGG SEV ESGG HFIQGGVRASELPVC DSFDEEEEPRP ADGTQPKPSSP TLGAAH SGQHSPTSSDQEDDGVVG+GPSRKAES+ATG EESEEQGVGMN GREDETKG+EP AA++RPMSFGLSPISEA A
Sbjct: 418 AFVLDEELHVYIAAMQLFPIKLNFSFIKNADVKHLFRLLDQREQEKMEWELLEGRVDGKTKAPPPSLTHGLAASFPRLFLEFVINLTNDISTSPVRLNGMKIPHLWNTPRQLTNSLQSHYIGALLRQLYKIVGSFDFLGDPVGL----GAGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTNITRSVGGGVAALSFDEEFQRRRINRRREAGGAGGVDRRTGGRGGAPGAARMLVHAVRDLGGGVYHGVTGIAVEPYRRAKEDGARGFVTGVFQGLAGVATKPMVGCLDAVTHTGEAVREMAGGLAAGDAALMAQRARFPQPFGPDGRMMPRTAETACGALLLARFPLWKDRHSYSREATVPTNPLSAATPTGXXXXXXX-KSALTESMPAVGLAQLESTRMEAVYSPFPEGGGGSGTMASEPLGITEPAPRGGWGSPVSDPGSPEEGLSPTRAKGGRSAVAFGGSGGGITPLPKEQGRRRSRRDIPEPDFVVSTELFHRREGQVVILVISNLRVLCVRAYLSRSGGSGRNGSGIGSRGMXXXXXXXXXXXXXXXXXXXXXGGXXXXXVGLRGSAITGLELEWQIRLESLTGLPAILDEDGGGTTLDFTYIVGATAGGGGRRRDGRMGLRSTLHRGRMAGIAAVLGNADGLDLSSGHHASGRGVAEVYPTLSAGTSGDVGGSSGKLRPRRVEGLYRDRPALIRAYNVVACLTNQFGRVLLSPGGVNVSGSKAVVRSHCLQPAGSAAKGPARDVGRRAANSGXXXXXXXXXXGSGIVSINGWEFGEDPREQLYSMAHAAAR-----GWAVPSRCTSPRMAKDRRSGGGGATDALVPRTDAAARGDGLLQRDLWMPLWLLMPQDSFTPADKLRPVPNAFEMDAVVWKPGPFSPETDPGSGWLNEARVAALEAPNHLLRVAVESEPMLDDSAKSLEVKDRFRQGKIDGVEFARFMAELKQTGADRIERRGRRGTAAAGAVVGADSSLAAISAAPGLTVSTASSTPGPSQGRDGGAGGVPGRVGGTDTSRDPDGGPAGLKSKRPANSTGMLSKLGGRLVAGLTTASLKADQGSGTNSPAGERARSEAGGVRRLRSPRRGSLFGSPRQEPQEPRTSEGSAATAGGSGWRPWSGPGSGNRKSTSDPSYPDRPAPSLADTGTPVRGGDAPTPSAQRAEAPLASSQLHHLGQGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSLRMEKIEDLLSKLLEASTGDKGMGGXXXG--DILQRWGRVAIGQGGGGHDPATRSSEGGTASGVVVAPGSRHSSNVLPEDSAGELMGAVKDTTAELRQVRRRLRQLELEEAAAKVAAXXXXSSQAPPAPNMVAPHSPQPSPPPAEGQVALPEASDGGISEVSESGGGHFIQGGVRASELPVCEKDSFDEEEEPRPFADGTQPKPSSPITLGAAHTSGQHSPTSSDQEDDGVVGTGPSRKAESTATGGESDHPPRGSRKNSVGRRGEESEEQGVGMNHGREDETKGDEPDVGSATRRGDGSRPGGSGSSGGAAVRRPMSFGLSPISEALA 1964
BLAST of mRNA_Ecto-sp13_S_contig2021.6635.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI) HSP 1 Score: 2301 bits (5964), Expect = 0.000e+0 Identity = 1351/1566 (86.27%), Postives = 1369/1566 (87.42%), Query Frame = 1
Query: 1 AFPLDEELHVYIAAMQLFPIKLNFSFIKNADVKRLFRLLDQREQEKMEWELLEGRVDGRTKAPPPSLTHGLAASFPRLLLEFVINLTNDISTSPVRLNGMKIPHLWNTPRQLTNSLQSHYIGALLRQLYKIVGSFDFLGDPVGVLSQARAGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKITRSVGGGVAALSFDDEFQRRRINRRREAGGAGGVDRRTGGRGGAPGAARMLVHAVRDLGGGVYHGVTGIAVEPYRRAKEDGARGFVTGVFQGLAGVATKPMVGCLDAVTHTGEAVREMAGGLAAGDAALMAQRARFPQPFGPDGRMMPRTAETACGALLLARFPLWKDRHSYPREATVPTNHLSAATPTGXXXXXXXX----------KPALTQSMPAVGLAQLESTRMEDVYSPFPEGGGGSGTTAAELLGITEPAPRGGWGSPVSDPGSPQEGFSPTRAKGGRSAVAFGGGGGGMAPLSKEQGRRRSRRDIQEPDFVVSTEFLHRREGQAIILVISNLRVLCVRAYLSRSGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSAITGLELEWQVRLESLTGLPAILDEDGGGTTLDFTYIVGATAGGGGRRRDGRMGLRSTLHRGRMAGIAAVLGNADGLDLSSGHHASGRGVAEGNPTLSAGTSGDGGGSAGRLRPRRVEGLYRDRPALIRAYNVVACLTNQFGRVLLSPGGANVSGSKAVVRSHVLQPAGSAAGGPARDVGRRAANSGXXXXXXXXXSGPGVVSINGWEFGEDPREQLYSMVHAAARNIAVRGWAAPSRFTSPRMAEDRRNGGGGATEALVTRTDAAARGDGLLQRDLWMPLWLLMPQDSFTPADKLRPVPNAFEMDAVVWKPGPFSPETDPGSGWLNMARVAALEAPNHLLRVAVESEPMLDDSAKSLEVKDRFRQGKIDRVEFARLVAELKRTGADRIERRGRRGTAAAGAGVGADSSLAVISAASGLTVSTASSTPGPSQGRDGGAGGVPGRVGGTDVSRDPDGGPAGLKSKRPANSTGMLSKLGGRLVAGLTTASLKADQGSGTNSPAGERARSEAGGVRRLRSPRRGSLFGSPRHESQEPRTSEGSAATAGGSGWRPWTGPGSGSRKSTSDPSYPDRPAPSSAGTGTPVRGGDVPTPSAQRGQAPVASSQLHHLGQGAASAGGAGPLTASEIDQMSSVSTTSTVLTDLSLRMEKIEDLLSKLLEASTGDKGMGXXXXXXXDILQRWGRVAIGQGGGSHDPATRSSEGGTALGVVAAPGSRHSSNVLPEDSAGELMGAVKDTTAELRQVRGRLRQLELEEAAAKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASDGGTSEVIESGGEHFIQGGVRASELPVCGNDSFDEEEEPRPSADGTQPKPSSPTTLGAAHASGQHSPTSSDQEDDGVVGSGPSRKAESSATGXXXXXXXXXXXXXXXXXXVEESEEQGVGMNGGREDETKGEEPXXXXXXXXXXXXXXXXXXXXXXAALQRPMSFGLSPISEAPA 4668
AF LDEELHVYIAAMQLFPIKLNFSFIKNADVK LFRLLDQREQEKMEWELLEGRVDGRTKAPPPSLTHGLAASFPRLLLEFVINLTNDISTSPVRLNGMKIPHLWNTPRQLTNSLQSHYIGALLRQLYKIVGSFDFLGDPVGVLSQ AGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKITRSVGGGVAALSFD+EFQR PGAARMLVHAVRDLGGGVYHGVTGIAVEPYRRAKEDGARGFVTGVFQGLAGVATKPMVGCLDAVTHTGEAVREMAGGLAAGDAALMAQRARFPQPFGPDGRMMPRTAETACGALLLARFPLWKDRHSY REA VPTN LSAATPTGXXXXXXXX K ALT+S+PAVGLAQLESTR+EDVY PFPEGGGGSGTTA+E LGITEPAPRGGWGSPVSDPGSPQE FSPTRAKGGR+A A G RSRRD+ EPDFVVSTEFLHRREGQAIILVISNLRVLCVRAYLSR GGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSAITGLELEWQVRLESLTGLPAILDEDGGGTTLDFTYIVGATAGGGGRRRDGRMGLRSTLHRGRMAGIAAVLGNADGLDLSSGHHA GRGVAE NPTLSAGTSGDGGGSAGRL PRRVEGLYRDRPALIRAYNVVACLTNQFGRVLLSPGG NV GSKAVVRSH LQPAGSA GGPARDVGRR A SG XXXXXXXXSGPGVVSINGWEFGEDPREQLYSM +AAARNIAVRGWAAPSRFTSPRMAE RR+GGGGAT+ALV RTDAAARGDGLLQRDLWMPLWLLMPQ+SFTPADKLRPVPNAFEMDAVVW PGPFSPETDPGS WL ARVAALEAPNHLLRVAVESEPMLDDSAKSLEVKDRFRQGKID VEFAR VAELKRTG DRIER RRGT AAGAGVGADSS+A ISAASGLTVS ASSTPGPSQGRDGGAGGVPGR GGTD SRDPDGGPAGLKSKRPANSTG+LSKLGGRLVAGLTTASLKADQGSGTNSPAGERARSEAGGVRRLRSPRRGSLFGSPRHE QEPRTSEGSAATAGGSGWRPWTGPGSGSRKSTSDPSYPDRPAPS AGTGTPVRGGDVPTPS Q GQAP ASSQLHHLGQGAA LTDLSLRMEKIEDLLSKLLEASTGDKGMG DILQRWGRVAIGQGGGSHDPATRSSEGGTA GVV APGSRHSSNVLP+DSAGELMGAVKDTTAELRQVR RLRQLELEE AAKV ASDGGTSEV ESGGEHFIQGGVRASELPVCGNDSFDEEEEPRP ADGTQPKPSSPTTLGAAHASGQHSPT S EDDGVVG+GPSRKAES+ATG EESEEQGVGMNGGREDETKGE P XXXXXXXXXXXXXXXXXXXXXAAL+RP+SFGLSPISEAPA
Sbjct: 7157 AFLLDEELHVYIAAMQLFPIKLNFSFIKNADVKHLFRLLDQREQEKMEWELLEGRVDGRTKAPPPSLTHGLAASFPRLLLEFVINLTNDISTSPVRLNGMKIPHLWNTPRQLTNSLQSHYIGALLRQLYKIVGSFDFLGDPVGVLSQLGAGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKITRSVGGGVAALSFDEEFQRXXXXXXXXXXXXXXXXXXXXXXXXPPGAARMLVHAVRDLGGGVYHGVTGIAVEPYRRAKEDGARGFVTGVFQGLAGVATKPMVGCLDAVTHTGEAVREMAGGLAAGDAALMAQRARFPQPFGPDGRMMPRTAETACGALLLARFPLWKDRHSYSREAIVPTNPLSAATPTGXXXXXXXXXXXXXXXXXXKSALTESIPAVGLAQLESTRLEDVYFPFPEGGGGSGTTASEPLGITEPAPRGGWGSPVSDPGSPQEVFSPTRAKGGRNAGALGXXXXXXXXXXXXXXXXRSRRDMPEPDFVVSTEFLHRREGQAIILVISNLRVLCVRAYLSRGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSAITGLELEWQVRLESLTGLPAILDEDGGGTTLDFTYIVGATAGGGGRRRDGRMGLRSTLHRGRMAGIAAVLGNADGLDLSSGHHAPGRGVAEVNPTLSAGTSGDGGGSAGRLHPRRVEGLYRDRPALIRAYNVVACLTNQFGRVLLSPGGVNVRGSKAVVRSHFLQPAGSATGGPARDVGRRVA-SGSXXXXXXXXSGPGVVSINGWEFGEDPREQLYSMAYAAARNIAVRGWAAPSRFTSPRMAEGRRSGGGGATDALVPRTDAAARGDGLLQRDLWMPLWLLMPQESFTPADKLRPVPNAFEMDAVVWAPGPFSPETDPGSAWLITARVAALEAPNHLLRVAVESEPMLDDSAKSLEVKDRFRQGKIDGVEFARFVAELKRTGTDRIERVRRRGTVAAGAGVGADSSVAAISAASGLTVSMASSTPGPSQGRDGGAGGVPGRGGGTDASRDPDGGPAGLKSKRPANSTGVLSKLGGRLVAGLTTASLKADQGSGTNSPAGERARSEAGGVRRLRSPRRGSLFGSPRHEPQEPRTSEGSAATAGGSGWRPWTGPGSGSRKSTSDPSYPDRPAPSPAGTGTPVRGGDVPTPSTQGGQAPAASSQLHHLGQGAAXXXXXXXXXXXXXXXXXXXXXXXXXLTDLSLRMEKIEDLLSKLLEASTGDKGMGGGG----DILQRWGRVAIGQGGGSHDPATRSSEGGTASGVVVAPGSRHSSNVLPDDSAGELMGAVKDTTAELRQVRRRLRQLELEETAAKVAAASGSSSQAPPAPTMVAPRSPQPSPPPAEGQVALPEASDGGTSEVSESGGEHFIQGGVRASELPVCGNDSFDEEEEPRPFADGTQPKPSSPTTLGAAHASGQHSPTPS--EDDGVVGTGPSRKAESTATGGESDHPPRDSRKNSGGRRGEESEEQGVGMNGGREDETKGEAPDXXXXXXXXXXXXXXXXXXXXXAALRRPISFGLSPISEAPA 8715
BLAST of mRNA_Ecto-sp13_S_contig2021.6635.1 vs. uniprot
Match: W7TRD9_9STRA (Vacuolar protein sorting-associated protein 13 family protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRD9_9STRA) HSP 1 Score: 206 bits (524), Expect = 2.860e-49 Identity = 132/360 (36.67%), Postives = 193/360 (53.61%), Query Frame = 1
Query: 28 VYIAAMQLFPIKLNFSFIKNADVKRLFRLLDQREQEKMEWELLEGRVDGRTKAPPPSLTHGLAASFPRLLLEFVI-NLTND--------ISTSPVRLNGMKIPHLWNTPRQLTNSLQSHYIGALLRQLYKIVGSFDFLGDPVGVLSQARAGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKITRSVGGGV-AALSFDDEFQRRRINRRREAGGAGGVDRRTGGRGGAPGAARMLVHAVRDLGGGVYHGVTGIAVEPYRRAKEDGARGFVTGVFQGLAGVATKPMVGCLDAVTHTGEAVREMAGGLAAGDAALMAQRARFPQPFGPDGRMMPRTAETACGALLLARF 1077
VYI ++L PIK+N SF K+A ++++++ E L G +D LT A P++ + F I +L D IS + ++LN + I H++ TP ++ +LQ+HY L Q Y+IVGS D +G+P+ S GV DFFYEPA+GL+KSP AF +GV KGT SLV NTTSG LG KI++S+G GV +S D F R R + RE A + +D G+YHG++GI +PY A++DG RG G+ GL G+ KP+VG LDAV HT + R++A ++ +R F F DGR++P + A G ++L ++
Sbjct: 4635 VYIERLELCPIKVNVSFHKSAVDRKVWQVAIGSTDVAAEAALRMGEMDTSHLIVNGQLTSAAARQNPQMAIIFTIFHLLTDVMMPLIPSISNASIKLNSLNIAHVFQTPTEIWGTLQAHYTSNFLFQFYRIVGSIDIIGNPLSFASSLGTGVIDFFYEPAQGLVKSPRAFVRGVVKGTSSLVTNTTSGFLGVAGKISKSIGSGVLCTISKDMSFMRSREHLARERSHA-------------------YLRPAKDFIHGIYHGISGIVTDPYYGARKDGCRGLFRGLGYGLVGIVAKPIVGVLDAVAHTSDGFRDLAMVISMERRLDPIRRQNFQHTFASDGRLLPYDVKLARGYMVLQKY 4975
BLAST of mRNA_Ecto-sp13_S_contig2021.6635.1 vs. uniprot
Match: A0A7R9UEG4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEG4_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.200e-40 Identity = 125/366 (34.15%), Postives = 188/366 (51.37%), Query Frame = 1
Query: 10 LDEELHVYIAAMQLFPIKLNFSFIKNADVKRLFRLLDQREQEKMEWELLEG-RVDGRTKAPPPSLTHGLAASFPRLLLEFVINLTNDISTSPVRLNGMKIPHLWNTPRQLTNSLQSHYIGALLRQLYKIVGSFDFLGDPVGVLSQARAGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKITRSVGGGVAALSFDDEFQRRR--INRRREAGGAGGVDRRTGGRGGAPGAARMLVHAVRDLGGGVYHGVTGIAVEPYRRAKEDG-----ARGFVTGVFQGLAGVATKPMVGCLDAVTHTGEAVREMAGGLAAGDAALMAQRARFPQPFGPDGRMMPRTAETACGALLLARFPL 1083
L++ V+I + +FPI+ N SFI ++ R E E + E +G RV G +L+ FV+++T+ I+ +P+ L +KI H + + ++ LQ Y A L QLYKI+ S DF+G+P+GV +AGV DFFYEP +G+++SP FG+GV +GT+SL+ N +S K+T +VG +AAL+FD F RR IN + + + + ++D+ GV +GV GI EP + + +G ARG G+ G+ GV K VG LDAVTHT ++ R +A LA RAR PQ FG DGR++ + + A R P+
Sbjct: 2990 LEQTEKVFIERLVIFPIQANVSFIHTPNLDSTSRA--DAEAEDQDSESTDGNRVVG-------------------VLVGFVLDITSSITDAPLTLAAVKITHQFESTSKIVEQLQKLYRDAALTQLYKILVSLDFVGNPLGVAKNVKAGVIDFFYEPGKGILQSPKDFGRGVVRGTVSLISNISSAAFTAANKMTGTVGKSMAALTFDHAFLERRYQINNQDKL---------------------LALRPLQDILAGVAYGVIGIVAEPVKGLRRNGSMSVKARGLALGLCFGILGVPLKTTVGVLDAVTHTTDSFRRVAQYLATDHTLHQVYRARLPQVFGMDGRLLFFSESISMCAYFCRRLPI 3313
BLAST of mRNA_Ecto-sp13_S_contig2021.6635.1 vs. uniprot
Match: A0A2P6NY36_9EUKA (LisH domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NY36_9EUKA) HSP 1 Score: 162 bits (410), Expect = 5.660e-36 Identity = 100/286 (34.97%), Postives = 158/286 (55.24%), Query Frame = 1
Query: 235 LLEFVINLTND----ISTSPVRLNGMKIPHLWNTPRQLTNSLQSHYIGALLRQLYKIVGSFDFLGDPVGVLSQARAGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKITRSVGGGVAALSFDDEF----QRRRINRRREAGGAGGVDRRTGGRGGAPGAARMLVHAVRDLGGGVYHGVTGIAVEPYRRAKEDGARGFVTGVFQGLAGVATKPMVGCLDAVTHTGEAVREMAGGLAAGDAALMAQRARFPQPFGPDGRMMPRTAETACGALLL 1068
++ ++I L D + +P+RLN + I + L + +Q+HY +++++YKI+GS DFLG+PVG+ + GV DFF+EPA GL++ P AFGKG+AKGT SL+ N+ G +K+T G ++ +SFD+E+ QR++ NRR + G G +++ ++ L G+ GV G+ +P + A+E GA G + G+ +GL G+ KP VG +D +THT E +R A D +RAR P+ G G + + E A G LL
Sbjct: 2825 VISYLITLLGDTFANLDNAPIRLNALIIQEAFCEMSDLQSRIQTHYTRQVIQEVYKILGSADFLGNPVGLFNSFSKGVGDFFFEPAAGLIEGPDAFGKGLAKGTFSLLKNSLYGTFNTASKLTGVAGKLLSKISFDNEYIAKRQRKKANRRAKHAGDG------------------VMYGIQALSSGIKEGVVGVVTQPMKGAREGGALGLIRGIGKGLVGLPIKPAVGAVDLLTHTTEGIRNTATMFEKED-----ERARQPRHIGGGGVISNYSKEEANGRNLL 3087
BLAST of mRNA_Ecto-sp13_S_contig2021.6635.1 vs. uniprot
Match: A0A7S4L3E8_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4L3E8_9EUKA) HSP 1 Score: 156 bits (395), Expect = 9.560e-36 Identity = 107/295 (36.27%), Postives = 153/295 (51.86%), Query Frame = 1
Query: 193 PSLTHGLAASFPRLLLEFVINLTNDISTSPVRLNGMKIPHLWNTPRQLTNSLQSHYIGALLRQLYKIVGSFDFLGDPVGVLSQARAGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKITRSVGGGVAALSFDDEFQRRRINRRREAGGAGGVDRRTGGRGGAPGAARMLVHAVRDLGGGVYHGVTGIAVEPYRRAKEDGARGFVTGVFQGLAGVATKPMVGCLDAVTHTGEAVREMAGGLAAGDAALMAQRARFPQPFGPDGRMMPRTAETACGALLLARF 1077
P+L + F RL+ + + N + +PV LN + I L+ T + L + + HYI L Q+YKIV SFD LG+PV ++S GVKDFFYEPA+GL++SP AFG+GVAKG+ SLV ++ G+ +KI+ S+G GVA LS D ++ + R R+ R G L+ +++LG GVY G TG+ ++P + AK+DG GF GV GL T T + ++ A + R R P+ G DGR+ A AC LLA
Sbjct: 223 PALLPNRDSPFRRLVGALGVGVVN-VENAPVMLNSLWIETLYLTRKDLMDRISQHYIQQGLTQVYKIVFSFDVLGNPVSLVSNLGTGVKDFFYEPAQGLVQSPMAFGRGVAKGSTSLVKHSVYGLSSTVSKISESMGKGVATLSMDQQYLQEREEASRQQ------PRHVG---------EGLIFGMKELGLGVYKGATGVVMDPIKGAKQDGLPGFAKGVGTGLIXXXXXXXXXXXXMATRTTQGIKATAVYFD-----IKTTRKREPRYIGSDGRLRVYDAGAACCQSLLAEL 496
BLAST of mRNA_Ecto-sp13_S_contig2021.6635.1 vs. uniprot
Match: A0A7R9ZBG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBG8_9STRA) HSP 1 Score: 151 bits (381), Expect = 2.950e-35 Identity = 101/300 (33.67%), Postives = 154/300 (51.33%), Query Frame = 1
Query: 196 SLTHGLAASFPRLLLEFVINLTNDISTSPVRLNGMKIPHLWNTPRQLTNSLQSHYIGALLRQLYKIVGSFDFLGDPVGVLSQARAGVKDFFYEPAEGLMKSPTA---FGKGVAKGTMSLVGNTTSGVLGFTTKITRSVGGGVAALSFDDEFQRRRINRRREAGGAGGVDRRTGGRGGAPGAARMLVHAVRDLGGGVYHGVTGIAVEPYRRAKEDGARGFVTGVFQGLAGVATKPMVGCLDAVTHTGEAVREMAGGLAAGDAALM-AQRARFPQPFGPDGRMMPRTAETACGALLLARFPL 1083
+L H ++A FP I+ +P+RL G + H++ T +++ SL+ +Y+ LRQ+YK+VGS DF+G+P V S GV+DFF +P KSP + G GVAKGT+SLV ++ +G+ GF +K++ + G A LS DD +++ ++ G +D R G + + +D+ GV TGI EPYR K+ G GF G+ G+ KP+VG DA H E++ ++A + D L ++ R P FG + P A A LL R PL
Sbjct: 60 NLPHLISAVFPA------------ITNAPIRLQGKHLAHVFETASEISASLKDYYVNETLRQIYKLVGSLDFVGNPTMVFSSFAVGVRDFFAQPTREFRKSPKSPSRLGIGVAKGTLSLVSHSATGIFGFASKMSATAGQAAATLSMDDHYKQWHSDKVTSLG----LDYRKGRQRTRKIIITGITRPAKDIVFGVVFAATGILAEPYRGMKKAGGVGFAKGMGIATVGIVAKPLVGVFDAFAHFTESIHDLAQNVNILDKKLQPVRKLRLPYTFGLKNILTPFNAVNARCMSLLLRHPL 343
BLAST of mRNA_Ecto-sp13_S_contig2021.6635.1 vs. uniprot
Match: A0A6S8CZ25_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8CZ25_9STRA) HSP 1 Score: 153 bits (387), Expect = 4.170e-35 Identity = 87/227 (38.33%), Postives = 132/227 (58.15%), Query Frame = 1
Query: 226 PRLLLEFVINLTNDISTSPVRLNGMKIPHLWNTPRQLTNSLQSHYIGALLRQLYKIVGSFDFLGDPVGVLSQARAGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKITRSVGGGVAALSFDDEFQRRRINRRREAGGAGGVDRRTGGRGGAPGAARMLVHAVRDLGGGVYHGVTGIAVEPYRRAKEDGARGFVTGVFQGLAGVATKPMVGCLD 906
P ++L + ++ D+ + RLNG+ + + TP +L ++L HY + + Q+YKI+GS + LG+P G++++ +GV+DFFYEPA+G ++SP FG G+A+GT+SLV NTT G K+T +G A LS D E+Q R AG +D G + V LG GV G++G+ +P R A+++G GF GV +G+ GVATKP VG D
Sbjct: 3 PSIVLSLMPTVSVDVENAQFRLNGLMLSQILITPNKLLDTLSRHYTASTVTQVYKIIGSSEILGNPFGLINRLGSGVRDFFYEPAQGFVQSPEDFGAGIARGTLSLVHNTTFGTFDTFDKLTSGIGSAFAYLSMDAEYQEERR--------AGLIDENPQWLG------EGVAMGVLTLGTGVSLGISGLVTQPLRGAEQEGVAGFFKGVGKGVLGVATKPAVGVFD 215
BLAST of mRNA_Ecto-sp13_S_contig2021.6635.1 vs. uniprot
Match: A0A662YB47_9STRA (PH domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YB47_9STRA) HSP 1 Score: 157 bits (396), Expect = 5.760e-35 Identity = 107/315 (33.97%), Postives = 154/315 (48.89%), Query Frame = 1
Query: 13 DEELHVYIAAMQLFPIKLNFSFIKNADVKRLFRLLDQREQEKMEWELLEGRVDG---RTKAPPPSLTHGLAASFPRLLLEFVI-NLTN---DISTSPVRLNGMKIPHLWNTPRQLTNSLQSHYIGALLRQLYKIVGSFDFLGDPVGVLSQARAGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKITRSVGGGVAALSFDDEFQRRRINRRREAGGAGGVDRRTGGRGGAPGAARMLVHAVRDLGGGVYHGVTGIAVEPYRRAKEDGARGFVTGVFQGLAGVATKPMVGCLDAVTHTGEAVR 936
E VY A + + P++ + +F +DV + + E + + G D R+ + P + + + + + I +LT D+ +PVRL+ + I H + T LT + +Y L +QL+KI+GSFDFLG+PVG L GV+DF YEP EGL F KG+AKGT SL+ NT G +KI+ + G G A LS DD +Q+ R RR G LV R+L GVY GV G+ + P R A+E GA GFV G G+ G+ KP+ G D + + VR
Sbjct: 40 SEARKVYFALLHIHPVEFDITF--RSDVFQTSTTISLHEAASFKKSKITGHHDDEMKRSSSAPSAFGDSTSDDSTQSAMTWAIPSLTMHVPDLDNAPVRLSALMIEHAFGTSSDLTRRVSKYYTRQLWKQLHKILGSFDFLGNPVGFLDHIGTGVRDFVYEPLEGLKVGGKGFSKGLAKGTASLMTNTVDGTFDAASKISGTFGQGFANLSLDDHYQQIRARARRHH---------------VRGLREGLVQGSRELSLGVYEGVAGLVLNPMRGAQEGGAVGFVRGTITGIIGLPVKPVAGIFDFASRATQGVR 337
BLAST of mRNA_Ecto-sp13_S_contig2021.6635.1 vs. uniprot
Match: H3HCA5_PHYRM (Mannosyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCA5_PHYRM) HSP 1 Score: 158 bits (400), Expect = 6.510e-35 Identity = 107/313 (34.19%), Postives = 151/313 (48.24%), Query Frame = 1
Query: 13 DEELHVYIAAMQLFPIKLNFSFIKNADVKRLFRLLDQREQEKMEWELLEGRVDG--RTKAPPPSLTHGLAASFPRLLLEFVINLTN---DISTSPVRLNGMKIPHLWNTPRQLTNSLQSHYIGALLRQLYKIVGSFDFLGDPVGVLSQARAGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKITRSVGGGVAALSFDDEFQRRRINRRREAGGAGGVDRRTGGRGGAPGAARMLVHAVRDLGGGVYHGVTGIAVEPYRRAKEDGARGFVTGVFQGLAGVATKPMVGCLDAVTHTGEAVR 936
E VY A + + P+ + +F +DV + + E + + G D R+ + P S + + + +LT D+ +PVRLN + I H + T LT + +Y L +QL+KI+GSFDFLG+PVG L GV+DF YEP EGL F KG+AKGT SL+ NT G +KI+ + G G A LS DD +Q+ R RR G LV ++L GVY GV G+ + P R A+E GA GFV G G+ G+ KP+ G D + + VR
Sbjct: 774 SETRKVYFALLHIHPMDFDITF--RSDVFQTTTTISLHEAASFKKSKITGNHDEMKRSSSAPSSFGEAGSEDSSSAMTWAIPSLTMHVPDLDNAPVRLNALMIEHAFGTSGDLTRRVSKYYTRQLWKQLHKILGSFDFLGNPVGFLDHIGTGVRDFVYEPLEGLKIGGKGFSKGLAKGTASLMTNTVDGTFDAASKISGTFGQGFANLSLDDHYQQNRARARRRH---------------VRGLREGLVQGSKELSLGVYEGVAGLVLNPMRGAQESGAVGFVRGTITGIIGLPVKPVAGIFDFASRATQGVR 1069 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig2021.6635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig2021.6635.1 >prot_Ecto-sp13_S_contig2021.6635.1 ID=prot_Ecto-sp13_S_contig2021.6635.1|Name=mRNA_Ecto-sp13_S_contig2021.6635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1543bp MQLFPIKLNFSFIKNADVKRLFRLLDQREQEKMEWELLEGRVDGRTKAPPback to top mRNA from alignment at Ecto-sp13_S_contig2021:3..9720+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig2021.6635.1 ID=mRNA_Ecto-sp13_S_contig2021.6635.1|Name=mRNA_Ecto-sp13_S_contig2021.6635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9718bp|location=Sequence derived from alignment at Ecto-sp13_S_contig2021:3..9720+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig2021:3..9720+ >mRNA_Ecto-sp13_S_contig2021.6635.1 ID=mRNA_Ecto-sp13_S_contig2021.6635.1|Name=mRNA_Ecto-sp13_S_contig2021.6635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=4629bp|location=Sequence derived from alignment at Ecto-sp13_S_contig2021:3..9720+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |