mRNA_Ecto-sp13_S_contig202.6629.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig202.6629.1 vs. uniprot
Match: D8LLH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLH0_ECTSI) HSP 1 Score: 550 bits (1416), Expect = 5.170e-196 Identity = 280/287 (97.56%), Postives = 284/287 (98.95%), Query Frame = 1
Query: 1 MARVLASCWMIVSLVPGACFLVPTNSRAALYSAGRRQLGQGYRDQQPSSRQPRNTGAGRREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLEGATEGCSIAVNGVCLTVTSFNDNEFKVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQECWFTFMLVAYTQQHVVIPEKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWRETA 861
MARVLAS W+IVSLVPGACFLVPTNSRAAL+SAGRRQLGQGYRDQQPSSRQPRNT AGRREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLEGATEGCSIAVNGVCLTVTSFND+EFKVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQECWFTFMLVAYTQQHVVIP+KSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWRE A
Sbjct: 1 MARVLASSWVIVSLVPGACFLVPTNSRAALHSAGRRQLGQGYRDQQPSSRQPRNTAAGRREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLEGATEGCSIAVNGVCLTVTSFNDDEFKVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQECWFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWREWA 287
BLAST of mRNA_Ecto-sp13_S_contig202.6629.1 vs. uniprot
Match: A0A835Z1K1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1K1_9STRA) HSP 1 Score: 347 bits (891), Expect = 2.130e-115 Identity = 182/284 (64.08%), Postives = 217/284 (76.41%), Query Frame = 1
Query: 175 RREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLEGATEGCSIAVNGVCLTVTSFNDNEFKVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQECWFTFMLVAYTQQHVVIPEKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWRETADRKLASSK-DGAEASE--------DIDFKIRHVEHKVKNRDMVLDVIENRLARLE 999
RR V+RAMFSGIVEE G+V SL +N +KLWDGS G GVELT+ A LEGA+ GCSIAVNGVCLTVT F++ +F+VGLAPETLRRSNL DL AGD VNLERAL GRNSGHFVQGHVD+VGTI + + DSL V+V P++L+RYI PKGFIA+DGTSLTVCEVN E WFTFMLVAYTQ H+V+P K+ GDKVN+EVDVLGKY+ERSL+SVLDRL ALE TA A K +GA A +++++ VEHKV +RD+V+D +E RL +E
Sbjct: 58 RRAVIRAMFSGIVEEKGTVKSLERNSAIKLWDGSVGEGVELTIAAKVALEGASLGCSIAVNGVCLTVTDFDEEQFRVGLAPETLRRSNLRDLAAGDAVNLERALASGGRNSGHFVQGHVDDVGTIAAFTPEGDSLWVRVSAPRELMRYIVPKGFIAIDGTSLTVCEVNAAEAWFTFMLVAYTQAHIVLPGKAVGDKVNIEVDVLGKYVERSLASVLDRLDALE----TAAAAAAPPKAEGARAXXXXXPAAEGSVEYRLGAVEHKVTSRDLVIDSVEARLRTIE 337
BLAST of mRNA_Ecto-sp13_S_contig202.6629.1 vs. uniprot
Match: A0A6V1VK25_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VK25_HETAK) HSP 1 Score: 298 bits (764), Expect = 3.090e-97 Identity = 153/229 (66.81%), Postives = 178/229 (77.73%), Query Frame = 1
Query: 160 NTGAGRREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKAN-TVLEGATEGCSIAVNGVCLTVTSFNDNEFKVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQECWFTFMLVAYTQQHVVIPEKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALE 843
N A +V R MFSGIVEEMG V SL + +K+WDGS G+G EL ++++ TVL+GA +G SIAVNGVCLTV F+D F+VGLAPETLRRSNL L AG VNLERAL D RNSGHFVQGHVD GTIL + + DSL VKV V ++L+RYI PKGFIA+DGTSLTVCE N E WF FMLVAYTQ+H++IP KS GDKVN+EVDVLGK +ERSL +VLDRL ALE
Sbjct: 33 NPRASSTQVPRMMFSGIVEEMGIVRSLEEKTDMKMWDGSTGSGTELCIESDGTVLDGAYDGASIAVNGVCLTVIEFDDKSFRVGLAPETLRRSNLPLLEAGQRVNLERALAADARNSGHFVQGHVDETGTILELRPEGDSLWVKVGVSRELMRYIVPKGFIAIDGTSLTVCETNVAEGWFNFMLVAYTQKHIIIPSKSLGDKVNVEVDVLGKLVERSLGNVLDRLDALE 261
BLAST of mRNA_Ecto-sp13_S_contig202.6629.1 vs. uniprot
Match: A0A7S3AZ04_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AZ04_9EUKA) HSP 1 Score: 293 bits (750), Expect = 1.480e-95 Identity = 148/218 (67.89%), Postives = 171/218 (78.44%), Query Frame = 1
Query: 190 RAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLEGATEGCSIAVNGVCLTVTSFNDNEFKVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQECWFTFMLVAYTQQHVVIPEKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALE 843
RAMFSGIVEEMG++ L K D + LWDGS G G E+ V+A+ VL A+ GCSIAVNGVCLTVT F++ F VGLAPET+RRSNL L+ GD VNLERALP DGRNSGHFVQGHVD+VG + + D DSL VKV P L+ YI PKGFIAVDGTSLTVCEVN E WF FMLVAYTQQ ++IP+K GD VNLEVDV+ KY+E+S++SVL RL ALE
Sbjct: 16 RAMFSGIVEEMGTIRRLEKVDGLTLWDGSVGEGWEMEVEASEVLGQASLGCSIAVNGVCLTVTEFDEGSFSVGLAPETIRRSNLVKLKTGDPVNLERALPADGRNSGHFVQGHVDDVGILEELLPDGDSLFVKVRPPARLLPYIVPKGFIAVDGTSLTVCEVNYTEGWFNFMLVAYTQQKIIIPKKKVGDPVNLEVDVISKYVEKSMASVLARLDALE 233
BLAST of mRNA_Ecto-sp13_S_contig202.6629.1 vs. uniprot
Match: A0A8J6CDG9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDG9_DIALT) HSP 1 Score: 290 bits (742), Expect = 9.200e-94 Identity = 154/258 (59.69%), Postives = 190/258 (73.64%), Query Frame = 1
Query: 82 AALYSAGRRQLGQGYRDQQPSSRQPRNTGAGRREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLEGATEGCSIAVNGVCLTVTSFNDNE--FKVGLAPETLRRSNLED--LRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQECWFTFMLVAYTQQHVVIPEKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALE 843
A + +AG R R ++ R+T A + RAMFSGIVEEMG V SL + +KLWDG+ G+G EL V+ +TVL+GAT+GCSIAVNGVCLTV F+ F+VGLAPETLRR+NL L+AGD VNLERALP DGRNSGHFVQGHVD VG ++S+ D DSL V V+ P+ L++YI PKGFIAVDGTSLTVC+V+ F+FML+ YTQQHVVIP+KS G VNLE DV+GKY+ERSL+ + +R+ ALE
Sbjct: 12 ALMPAAGWRPAAAAMRGSAVAATMRRSTRAPAASLPRAMFSGIVEEMGRVESLAERTDMKLWDGTIGSGWELAVRGSTVLDGATQGCSIAVNGVCLTVVDFDAGSGVFRVGLAPETLRRTNLNPAALKAGDAVNLERALPADGRNSGHFVQGHVDAVGELVSLTPDGDSLWVVVKAPRSLMKYIVPKGFIAVDGTSLTVCDVDYAASTFSFMLIGYTQQHVVIPQKSAGLTVNLEADVIGKYVERSLAGLSERVAALE 269
BLAST of mRNA_Ecto-sp13_S_contig202.6629.1 vs. uniprot
Match: A0A0M0JSD6_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JSD6_9EUKA) HSP 1 Score: 284 bits (727), Expect = 2.430e-92 Identity = 143/216 (66.20%), Postives = 168/216 (77.78%), Query Frame = 1
Query: 196 MFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLEGATEGCSIAVNGVCLTVTSFNDNEFKVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQECWFTFMLVAYTQQHVVIPEKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALE 843
MFSGIVEEMG V+ L K ++K WDG+ G G EL V+A LEGA+ GCSIAVNGVCLTVT F+ ++FKVGLAPET+RR+NLE L GD VN+ERALP DGRNSGHFVQGHVD++G I + D DSL V+V P L+ YI PKGFIA+DGTSLTVC VN E WF FML+A+TQQ VVIP+K+ GD VNLEVDVL KY+E+ L +V RL ALE
Sbjct: 1 MFSGIVEEMGKVSKLDKVPRLKQWDGTVGEGWELEVEATVALEGASLGCSIAVNGVCLTVTEFDKHKFKVGLAPETIRRTNLERLVPGDPVNVERALPADGRNSGHFVQGHVDDIGIIEELRPDGDSLWVRVRPPARLMPYIVPKGFIAIDGTSLTVCNVNAAEGWFDFMLIAFTQQKVVIPKKAVGDAVNLEVDVLAKYVEQGLKAVTARLDALE 216
BLAST of mRNA_Ecto-sp13_S_contig202.6629.1 vs. uniprot
Match: B7G545_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G545_PHATC) HSP 1 Score: 283 bits (725), Expect = 6.840e-92 Identity = 139/232 (59.91%), Postives = 178/232 (76.72%), Query Frame = 1
Query: 196 MFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLEGATEGCSIAVNGVCLTVTSFNDNE--FKVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQECWFTFMLVAYTQQHVVIPEKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWRETADRKLASSK 885
MF+GIVEEMG V SL + D + LWDG++G+G ELTVKA+ ++EGA GCSI V+GVCLT T + +E F+VGLAPET+RR+ L DL+ GD VNLERA + GRNSGHFVQGHVD+ G I+ DEDSL K++V D++ YI PKGFIA+DGTSLTVCEV+ QE WFTFMLV YTQ+ +++P K GD+VNLEVDVLGKY E +L++++ RL ALE E+ ++ L + K
Sbjct: 1 MFTGIVEEMGEVVSLTQRDDMPLWDGTKGSGTELTVKASIMMEGAYLGCSICVSGVCLTATELDYDESIFRVGLAPETIRRTYLGDLKTGDAVNLERASEIGGRNSGHFVQGHVDDTGEIIDRWTDEDSLFFKIKVTPDVLAYIVPKGFIAIDGTSLTVCEVDYQEKWFTFMLVEYTQKKIIVPAKKVGDRVNLEVDVLGKYSENALAALIPRLEALEAKVESLEKALVAGK 232
BLAST of mRNA_Ecto-sp13_S_contig202.6629.1 vs. uniprot
Match: A0A7S3SZI5_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SZI5_9SPIT) HSP 1 Score: 280 bits (717), Expect = 1.040e-90 Identity = 138/218 (63.30%), Postives = 166/218 (76.15%), Query Frame = 1
Query: 190 RAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLEGATEGCSIAVNGVCLTVTSFNDNEFKVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQECWFTFMLVAYTQQHVVIPEKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALE 843
R +FSGIVEE+G V L K + LWDGS G GVE+ V A+TVLEGA EGCSIAVNGVCLTVT F+D GLAPETLRR+NL G VNLERALP DGRNSGHFVQGHVD+VG I SM D ++L V++ P L++YI PKGFI VDGTSLTVCE + + WF FMLVAYTQQH+ +P+K G++VNLEVDV+ KY+ERS+ +++DR+ LE
Sbjct: 2 RCVFSGIVEEIGEVVRLEKRGDLTLWDGSVGEGVEMEVAASTVLEGAYEGCSIAVNGVCLTVTKFDDKTACFGLAPETLRRTNLHAAGPGTLVNLERALPADGRNSGHFVQGHVDDVGVIESMTPDGEALTVRIRPPAHLMKYIVPKGFICVDGTSLTVCEADPGKGWFDFMLVAYTQQHIALPKKKVGEQVNLEVDVMAKYVERSVGALVDRVAELE 219
BLAST of mRNA_Ecto-sp13_S_contig202.6629.1 vs. uniprot
Match: A0A7S3PVE8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVE8_9STRA) HSP 1 Score: 281 bits (719), Expect = 2.500e-90 Identity = 138/231 (59.74%), Postives = 178/231 (77.06%), Query Frame = 1
Query: 196 MFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLEGATEGCSIAVNGVCLTVTSFNDNEFKVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQ--ECWFTFMLVAYTQQHVVIPEKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWRETADRKLASS 882
MF+GIVEEMG+V L + D + LWDGS+G+G ELTVK N VL+GA GCSI VNGVCLT T + FKVGLAPETLRR+ L +L++GD VNLERA + GRNSGHFVQGHVD VGTI+ DEDSL KV+V +L+RYI KGF+A+DGTSLTVCEVN++ E WFTFMLV YTQ+ ++IP+K G+ +N+EVDVLGKY E +L++++ R+ LE ++ + +LA++
Sbjct: 42 MFTGIVEEMGTVIKLEERDDMTLWDGSKGSGTELTVKGNIVLDGAYLGCSICVNGVCLTATELEEEFFKVGLAPETLRRTYLGELKSGDFVNLERASEIGGRNSGHFVQGHVDGVGTIIDRWIDEDSLFFKVKVEPELLRYIVAKGFVAIDGTSLTVCEVNSRLDESWFTFMLVEYTQKKIIIPQKKVGELLNIEVDVLGKYSESALAAIIPRIEELESKVKSLEEQLANA 272
BLAST of mRNA_Ecto-sp13_S_contig202.6629.1 vs. uniprot
Match: A0A7S1ZE03_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZE03_TRICV) HSP 1 Score: 280 bits (717), Expect = 6.510e-90 Identity = 142/242 (58.68%), Postives = 178/242 (73.55%), Query Frame = 1
Query: 169 AGRREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLEGATEGCSIAVNGVCLTVTS--FNDNEFKVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQ--ECWFTFMLVAYTQQHVVIPEKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWRETADRKLASS 882
AGR R MF+GIVEEMG V SL + D + LWDGS+G G ELTVK ++GA GCSI V+GVCLT T F ++FKVGLAPETLRR+ L L+ G VNLERA + GRNSGHFVQGHVD +GTI+ DEDSL KV+V DL+RYI PKGF+A+DGTSLTVCEV+ + E WFTFMLV YTQ+ ++IP+K GD +N+EVDVLGKY E ++++VL R+ LE+ + ++KLA +
Sbjct: 40 AGRTTTRRRMFTGIVEEMGEVVSLEERDDMTLWDGSKGKGTELTVKGKVAMDGAYLGCSICVSGVCLTATELDFPSDQFKVGLAPETLRRTYLGSLKPGSAVNLERASEIGGRNSGHFVQGHVDGIGTIIDRWTDEDSLFFKVQVDDDLLRYIVPKGFVAIDGTSLTVCEVDTRPDEKWFTFMLVEYTQKKIIIPQKVVGDPLNIEVDVLGKYSESAIAAVLPRIEELENRVKELEQKLAEA 281 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig202.6629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig202.6629.1 >prot_Ecto-sp13_S_contig202.6629.1 ID=prot_Ecto-sp13_S_contig202.6629.1|Name=mRNA_Ecto-sp13_S_contig202.6629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=341bp MARVLASCWMIVSLVPGACFLVPTNSRAALYSAGRRQLGQGYRDQQPSSRback to top mRNA from alignment at Ecto-sp13_S_contig202:10664..15210+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig202.6629.1 ID=mRNA_Ecto-sp13_S_contig202.6629.1|Name=mRNA_Ecto-sp13_S_contig202.6629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4547bp|location=Sequence derived from alignment at Ecto-sp13_S_contig202:10664..15210+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig202:10664..15210+ >mRNA_Ecto-sp13_S_contig202.6629.1 ID=mRNA_Ecto-sp13_S_contig202.6629.1|Name=mRNA_Ecto-sp13_S_contig202.6629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1023bp|location=Sequence derived from alignment at Ecto-sp13_S_contig202:10664..15210+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |