mRNA_Ecto-sp13_S_contig2019.6622.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig2019.6622.1 vs. uniprot
Match: D7FME5_ECTSI (5'-3' exoribonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME5_ECTSI) HSP 1 Score: 800 bits (2067), Expect = 2.500e-291 Identity = 397/399 (99.50%), Postives = 397/399 (99.50%), Query Frame = 1
Query: 1 VAPRAKMNQQRSRRFRARKDMQEAKLIAESKGEVVDDTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNAARGKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEETAAEMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRSYEKAMLDTMGYVPEAEDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 1197
VAPRAKMNQQRSRRFRARKDMQEAKLIAESKGEVVDDTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNAARGKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEETAAEMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAK QRSYEKAMLDTMGYVPE EDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL
Sbjct: 90 VAPRAKMNQQRSRRFRARKDMQEAKLIAESKGEVVDDTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNAARGKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEETAAEMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKRQRSYEKAMLDTMGYVPETEDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 488
BLAST of mRNA_Ecto-sp13_S_contig2019.6622.1 vs. uniprot
Match: A0A835Z4G8_9STRA (XRN 5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4G8_9STRA) HSP 1 Score: 529 bits (1363), Expect = 1.610e-176 Identity = 272/404 (67.33%), Postives = 307/404 (75.99%), Query Frame = 1
Query: 1 VAPRAKMNQQRSRRFRARKDMQEAKLIAESKGEVVDDTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNAARG----KNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEETAAEMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRSYEKAMLDTMGYVPEAEDGG-KDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 1197
VAPRAKMNQQRSRRFR+ KD A+ VFDSNCITPGTEFMAK+S HL+YF++KKI EDPLW+ LTV FSGHEVPGEGEHKIM YIRD+R AG PNTRHCMYGQDADLILLGLV HEPHFTLLREVVNF A G KNA K+V+KTT DAQFQLLHLSVLREY+W EFT M TA+ + ERVVDDFVF+TFLVGNDFLPHMPSLDIGEEAF+LLF IYR L P W GGYLTR+G+I+ DRLE FL+ VG++EDEIF+ R EE R R+R R G + VPSE ++ EE +LQ +YE AML +G+VPE G KD+KGRYYFEKFGITP+HT++H LR YV GL WCLA GCVSW WFFPFHYVPM+SDL
Sbjct: 90 VAPRAKMNQQRSRRFRSAKDAAAARAEXXXXXXXXXXXXVFDSNCITPGTEFMAKVSAHLKYFIRKKIKEDPLWQRLTVIFSGHEVPGEGEHKIMQYIRDQRCAGAFAPNTRHCMYGQDADLILLGLVAHEPHFTLLREVVNFNNGRAGGARGAKNAVKLVMKTTADAQFQLLHLSVLREYLWVEFTLGMSAATASALSLERVVDDFVFITFLVGNDFLPHMPSLDIGEEAFALLFGIYRELAPAW-RGGYLTRDGSIEDPDRLEQFLAAVGAKEDEIFATREIEEEGMRERQR----RHGNRQNVPSEEDLDDEETRLQEAYEDAMLQVLGHVPEGSTPGQKDFKGRYYFEKFGITPVHTQVHSELRHQYVAGLQWCLA----GCVSWEWFFPFHYVPMLSDL 484
BLAST of mRNA_Ecto-sp13_S_contig2019.6622.1 vs. uniprot
Match: A0A7S4RC29_9STRA (5'-3' exoribonuclease 1 n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RC29_9STRA) HSP 1 Score: 459 bits (1182), Expect = 1.860e-145 Identity = 237/421 (56.29%), Postives = 302/421 (71.73%), Query Frame = 1
Query: 1 VAPRAKMNQQRSRRFRARKDMQEA---KLIAESKGEVVD-DTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNAARGKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFT---RDMPEETAAE---MDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRSYEKAMLDTM------------GYVPEAEDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 1197
VAPRAK+NQQRSRRFR+ KD+ EA K + + E D FDSNCITPGTEFMA++S ++YF++KKI EDPLW+ L + FSGHEVPGEGEHKIM +IR+ R+ PNTRHCMYGQDADLI+LGLV+HEPHFTLLRE+V+FG +R NA K V+K T+ + FQLLHLS+LREY+ EF RD + + + D ER++DDFVF+TFLVGNDFLPHMPSLDIG+ AF LLF Y+ +P WG G YLT G I +RLEAF++ +G+ E++IF R E E E+ +RRK KR G+ E + S+A+IA EA+ Q +Y+ A++++M G+ P + KD+KGRYYFEKF + P + H LR AY+EGLLWCLAYYYRGC+SWGWF+P+HY PM+SDL
Sbjct: 90 VAPRAKLNQQRSRRFRSAKDLAEAMKDKSLTSNPNEENDAHKGAFDSNCITPGTEFMARVSECIKYFIRKKIKEDPLWRNLKIIFSGHEVPGEGEHKIMQHIREMRNQPGYQPNTRHCMYGQDADLIMLGLVSHEPHFTLLREIVDFGAGFSRNDNALKSVMKFTKQSDFQLLHLSILREYLQIEFAFGGRDGIYDLSVKEGTYDLERLIDDFVFMTFLVGNDFLPHMPSLDIGDGAFDLLFNTYKEQRPTWGDGQYLTESGCISDPERLEAFIAVIGAAENDIFEMREENEEEYTKKRRKWDKRDGKPEGL-SDAQIAAAEARKQTNYQ-AVIESMLEKNSSDGSLVDGWQPVTDPKKKDFKGRYYFEKFTMIPTDVKEHLALRKAYIEGLLWCLAYYYRGCISWGWFYPYHYGPMLSDL 508
BLAST of mRNA_Ecto-sp13_S_contig2019.6622.1 vs. uniprot
Match: A0A1Z5JKV0_FISSO (5'-3' exoribonuclease 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKV0_FISSO) HSP 1 Score: 449 bits (1155), Expect = 6.690e-142 Identity = 223/412 (54.13%), Postives = 291/412 (70.63%), Query Frame = 1
Query: 1 VAPRAKMNQQRSRRFRARKDMQEAKLIAESKGEVVDDTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNAARGKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEETAAEMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRSYEKAMLDTM-------------GYVPEAEDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 1197
VAPRAK+NQQRSRRFR+ KD EA +K + VFDSNCITPGTEF+AK+S H++YF++KK+ EDPLW LTV FSGH++PGEGEHKIM +IR+ RS PN RHC+YGQDADLI+L L+THEPHFT+LREV++F + +N K V K T+++ FQLLH+S+LREY+ EF + P+ D ER +DDFVF+TFLVGNDFLPH+P+LDIG+ AF LLF +Y+ + GWG G YLT G I RLE F+ +G+ E +I +R +EEA + ++R+ KR G+ EE PS+AE+A E++ Q Y +M++ + G+ P E G KD+KGRYYFEK TPL E H LR +Y+EGL+WCLAYYY+GC+SWGWF+P+HY PM+SDL
Sbjct: 90 VAPRAKLNQQRSRRFRSAKDTAEA-----TKDLPASEKNVFDSNCITPGTEFLAKVSEHIQYFIRKKLKEDPLWHGLTVIFSGHDIPGEGEHKIMQHIRELRSQPGYQPNNRHCIYGQDADLIMLSLITHEPHFTILREVIDFNF-CRQQQNTLKAVKKFTKESDFQLLHVSILREYLHIEFCHEHPQ-----YDLERTIDDFVFMTFLVGNDFLPHLPALDIGDGAFDLLFSVYKEQRAGWGEGNYLTESGDISDPHRLEVFVEAIGAVETDILEQREKEEAAYAKKKRRWDKRDGK-EEGPSDAELAAVESEKQNGY-LSMIEALMQQPNWSPENFVAGWTPVTESGQKDFKGRYYFEKLKFTPLDKEKHWALRRSYMEGLMWCLAYYYKGCISWGWFYPYHYGPMLSDL 488
BLAST of mRNA_Ecto-sp13_S_contig2019.6622.1 vs. uniprot
Match: A0A6V1PVC7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PVC7_HETAK) HSP 1 Score: 445 bits (1144), Expect = 4.500e-141 Identity = 222/362 (61.33%), Postives = 268/362 (74.03%), Query Frame = 1
Query: 121 FDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNAARGKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEETAAEMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRSYEKAMLDTMGYV---PEAEDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 1197
FDSNCITPGT +MAK+SRHL+YFV++KI EDPLW+ LTV +SG EVPGEGEHKIM YIR +R+AG P N RHCMYGQDADL++LGL+THEPHFTLLREV++FG A + ++A +K T A FQLLHLSVLREY+ EF+R+ P+ T +D ER++DDFVF+TFLVGNDFLPHMPSLDIGE AF LF IYRSL WG GGYLT G + DRLE FL +G EDEIF+ERA E EF+ RRR ++RFG A PSE E ++A+ + + + MG P ED G +K YY EK G+ P H + HDRLR AY+EGL+WCLAYYY GCVSWGWF+P+HY P+ISDL
Sbjct: 7 FDSNCITPGTAWMAKVSRHLQYFVRRKIKEDPLWQRLTVIYSGMEVPGEGEHKIMNYIRHQRAAGVFPANCRHCMYGQDADLVMLGLITHEPHFTLLREVIDFG--AFKRRSAGGPQMKQTSKAAFQLLHLSVLREYLALEFSREQPQRT---LDPERLIDDFVFMTFLVGNDFLPHMPSLDIGEHAFDRLFGIYRSLLAQWGEGGYLTDAGKLRDPDRLEQFLKCIGDMEDEIFAERAAEVEEFKSRRRGRNERFGAAPSGPSEEEEEAQKAQTRAEVHARLQEAMGAEAAPPAPEDMG--FKVAYYMEKLGLAPNHHQFHDRLRQAYIEGLIWCLAYYYEGCVSWGWFYPYHYGPLISDL 361
BLAST of mRNA_Ecto-sp13_S_contig2019.6622.1 vs. uniprot
Match: A0A7S2PSP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSP2_9STRA) HSP 1 Score: 434 bits (1115), Expect = 3.400e-140 Identity = 226/418 (54.07%), Postives = 285/418 (68.18%), Query Frame = 1
Query: 1 VAPRAKMNQQRSRRFRARKDMQEAKLIAESK---GEVVDD----TAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNAARGKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEETAAEMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRSYEKAMLDTMGYVP----EAEDGGK--------DYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 1197
VAPRAK+NQQRSRRFR+ KD+ EA + K G ++D + FDSNCITPGTEF+ +IS +RYF++KKI EDP W+ L+V FSG +VPGEGEHKIM +IRD R+ PNTRHCMYGQDADLI+LGLV+HEPHFTLLRE+++F +R NA K V K T+ + FQLLHLS+LREY+ EF T D ER++DDFVF+TFLVGNDFLPHMP+LDIG+ AF+LLF Y+ + WG+G YLT G I A RLEAFL +G+ E +IF ERA+ E + ++R+ KR + PS+ E+ +E Q Y + M + EA DG K D+KGRYYFEK + P + H LR +Y+EGL+WCLAYYYRGC+SWGWF+P+HY PMISDL
Sbjct: 90 VAPRAKLNQQRSRRFRSAKDLAEATKATKLKPLDGTDLNDADPYSGAFDSNCITPGTEFLLRISDCIRYFIRKKIKEDPQWRNLSVIFSGPDVPGEGEHKIMQHIRDMRNQPGYQPNTRHCMYGQDADLIMLGLVSHEPHFTLLREIIDFSGGFSRNDNALKEVKKFTKQSDFQLLHLSILREYLQLEFVYKHDPST---YDLERIIDDFVFMTFLVGNDFLPHMPTLDIGDGAFTLLFDTYKEHREKWGNGQYLTNAGEISDAARLEAFLEVIGAAESDIFEERAKNEVKMLKKQRQWDKRDKKPGRTPSDLELNAKEESKQNDYMSMVQGMMADISLKGTEAVDGWKAPTNLSEKDHKGRYYFEKLHLKPTDVDDHLALRKSYIEGLIWCLAYYYRGCISWGWFYPYHYGPMISDL 504
BLAST of mRNA_Ecto-sp13_S_contig2019.6622.1 vs. uniprot
Match: A0A448ZS96_9STRA (5'-3' exoribonuclease 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZS96_9STRA) HSP 1 Score: 442 bits (1138), Expect = 4.120e-139 Identity = 227/411 (55.23%), Postives = 291/411 (70.80%), Query Frame = 1
Query: 1 VAPRAKMNQQRSRRFRARKDMQEA-KLIAESKGEV--VDDTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNAARGKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEETAAEMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRSYEKAMLDTMGYVPEAE---------DGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 1197
VAPRAK+NQQRSRRFR+ KDM EA K + + + + + +FDSNCITPGTEFMA++S ++YF++KKI EDPLW+ L V FSGHE+PGEGEHKIM +IR ++ PN RHC+YGQDADLI+LGLVTHEPHFT+LREVV+FG + KNA K+V K T++A FQLLHLSVLREY++ EF +D P T +D ER +DDFVF+TFLVGNDFLPH+ +LDIGE AF LLFQ+YR + WG G YLT G I + RLE +L+ +G+ E E R +A++ ++R+ +KR G + PS+AE+ + Q +Y + + MG E G KD+KGRYYFEK +TP+ H LR AY+EGL+WCLAYYYRGC+SWGWFFP+HY PM+SDL
Sbjct: 90 VAPRAKLNQQRSRRFRSAKDMAEATKDLPKERDDAGNIKKPDLFDSNCITPGTEFMARVSETIKYFIRKKIKEDPLWRDLKVIFSGHELPGEGEHKIMEHIRMMKNEPNYQPNNRHCIYGQDADLIMLGLVTHEPHFTILREVVDFGGGFSN-KNALKMVKKQTKEADFQLLHLSVLREYLYLEFCKDAPPGT---LDLERTIDDFVFMTFLVGNDFLPHLNTLDIGEGAFDLLFQVYRDQRSQWGEGEYLTENGNISDSARLETYLATIGNVETETLENREVTDAQYLKKKRRWNKRDG-LDAGPSDAELKAADDAKQGNYLNMIQNIMGNQENREFVDGWNPVGPGEKDFKGRYYFEKLKLTPVDVSGHHALRQAYMEGLIWCLAYYYRGCISWGWFFPYHYGPMLSDL 495
BLAST of mRNA_Ecto-sp13_S_contig2019.6622.1 vs. uniprot
Match: W7U4G2_9STRA (5'-3' exoribonuclease 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4G2_9STRA) HSP 1 Score: 441 bits (1133), Expect = 3.540e-138 Identity = 235/441 (53.29%), Postives = 292/441 (66.21%), Query Frame = 1
Query: 1 VAPRAKMNQQRSRRFRARKDMQEAKLIAESKGEVVDDTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQN-AARGKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEETAAEMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEIFSERAEEEAEFRGRRRKTSKRFG-RAEEVPSEAEIALEEAKLQRSYEKAMLDT--------------MGYVP-------EAEDGG------------------KDYKGRYYFEKFGIT-PLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 1197
VAPRAKMNQQRSRRFRA KD EA+ A +G VD+ VFDSNCITPGTEFMA + HL+YF++KK+ EDPLW+ LT+ +SGH +PGEGEHKIM Y+RD +++ N RHCMYGQDADLI+L L THEPHFTLLREV++FG+ A G +++ V+K T++A FQLLHLS+LREY+ EF RD+PEE E+ ER+VDDFVFLTFLVGNDFLPH+PSLDI E AF LF++Y W GYLT G ID + L+AFL +G+ ED+I R E+ A+F RRR+T K+FG R EVPSE +A EA+ Q YE AM +G+ P DGG K+++GRYYFEK G+ P + + L Y EGL WCLAYY +GCVSW WFFP+HY P+ISD+
Sbjct: 90 VAPRAKMNQQRSRRFRAAKDAAEAREEAGKRGVSVDEATVFDSNCITPGTEFMAVVDAHLQYFIRKKMREDPLWRRLTIIYSGHAIPGEGEHKIMQYMRDLKASPSYQANVRHCMYGQDADLIMLALATHEPHFTLLREVIDFGRGRAGPGGSSANTVIKQTKEASFQLLHLSILREYLEFEFLRDVPEEER-EVHLERIVDDFVFLTFLVGNDFLPHLPSLDISEHAFDKLFELYGEQYRTWEGQGYLTNRGEIDI-EHLQAFLDAIGAMEDDILKAREEDVADFNARRRRTQKKFGVRGAEVPSEEALAEIEAEAQSKYEMAMAVAVKKGEISKERARVLLGFAPIPVDKEGSGPDGGGTKKGKAEQALSVPEPVKKNFRGRYYFEKLGVLDPECSPVVQDLCKRYAEGLAWCLAYYVKGCVSWKWFFPYHYGPLISDV 528
BLAST of mRNA_Ecto-sp13_S_contig2019.6622.1 vs. uniprot
Match: K0STL9_THAOC (5'-3' exoribonuclease 1 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STL9_THAOC) HSP 1 Score: 439 bits (1130), Expect = 4.710e-138 Identity = 232/414 (56.04%), Postives = 285/414 (68.84%), Query Frame = 1
Query: 1 VAPRAKMNQQRSRRFRARKDMQEAKLIAES----KGEVVDDTA-VFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNAARGKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEETAAEMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRSYEKAMLDTMGYVP----------EAEDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 1197
VAPRAK+NQQRSRRFR+ KD+ EA A+ G D A FDSNCITPGTEF+ +IS +RYF++KKI EDPLW+ L+V FSG EVPGEGEHKIM +IRD R+ PNTRHCMYGQDADLI+LGLV+HEPHFTLLRE+++F R NA K V K T+ + FQLLHLS+LREY+ EF + T D ER++DDFVF+TFLVGNDFLPHMP+LDIG+ AF+LLF YR + WG+G YLT G I RLEAFL +G+ E EIF ERA+ E R ++R+ KR G++ +PS+ EIA EA Q Y + M V + + KD+KGRYY+EK + P+ H LR +Y+EGL+WCLAYYYRGC+SWGWFFP+HY PMISDL
Sbjct: 147 VAPRAKLNQQRSRRFRSAKDLAEATKEAQRLRPIDGADPDPYAGAFDSNCITPGTEFLLRISNCIRYFIRKKIKEDPLWRNLSVIFSGPEVPGEGEHKIMQHIRDMRNQLGYRPNTRHCMYGQDADLIMLGLVSHEPHFTLLREIIDFSGGFGRNDNALKEVKKFTKQSDFQLLHLSILREYLEIEFAYQHDQST---YDLERIIDDFVFMTFLVGNDFLPHMPTLDIGDGAFTLLFDTYREQRARWGNGQYLTDSGEIPNPARLEAFLKVIGAAETEIFEERAKNEVVMRKKQRRWDKRDGKSS-MPSDLEIAEVEASKQSDYNAMVRSMMADVSSGTQVVEGWKQVGESEKDHKGRYYYEKLQLKPVDIAGHLALRKSYIEGLIWCLAYYYRGCISWGWFFPYHYGPMISDL 556
BLAST of mRNA_Ecto-sp13_S_contig2019.6622.1 vs. uniprot
Match: A0A7S4EG33_9STRA (5'-3' exoribonuclease 1 n=4 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG33_9STRA) HSP 1 Score: 439 bits (1129), Expect = 8.050e-138 Identity = 231/412 (56.07%), Postives = 288/412 (69.90%), Query Frame = 1
Query: 1 VAPRAKMNQQRSRRFRARKDMQEA-KLIAESKGEV--VDDTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNAARGKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEETAAEMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRSYEKAMLDTM----------GYVPEAEDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 1197
VAPRAK+NQQRSRRFR+ KDM EA K + + + + + +FDSNCITPGTEFMA++S ++YF++KKI EDPLW+ L + FSGHE+PGEGEHKIM +IR R+ PN RHC+YGQDADLI+LGLVTHEPHFT+LREVV+F + KNA KVV K T++A FQLLHLSVLREY++ EF +D +D ER +DDFVF+TFLVGNDFLPH+ +LDIGE AF LLFQIY + WG G YLT G I RLE +L+ +GS E E R +A++ ++RK +KR G +E PS+AE+ E Q Y + D M G+ P + G KD+KGRYYFEK +TPL E LR AY+EGL+WCLAYYYRGC+SWGWFFP+HY PM+SDL
Sbjct: 90 VAPRAKLNQQRSRRFRSAKDMAEATKDLPKERDDSGNIKKPDLFDSNCITPGTEFMARVSETIKYFIRKKIKEDPLWRDLKIIFSGHELPGEGEHKIMEHIRMMRNEPNYQPNNRHCIYGQDADLIMLGLVTHEPHFTILREVVDFSGGFSN-KNALKVVKKQTKEADFQLLHLSVLREYLYLEFCKDA---APGVLDLERTIDDFVFMTFLVGNDFLPHLTTLDIGEGAFDLLFQIYMEHRSHWGEGQYLTENGNISDPARLETYLAAIGSVETETLENREVTDAKYLKKKRKWNKRDG-LDEGPSDAELKAAEDAKQGDYLSMIQDLMEKHADGPFVDGWTPP-QPGEKDFKGRYYFEKMKLTPLDLEGQYALRQAYMEGLIWCLAYYYRGCISWGWFFPYHYGPMLSDL 495 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig2019.6622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig2019.6622.1 >prot_Ecto-sp13_S_contig2019.6622.1 ID=prot_Ecto-sp13_S_contig2019.6622.1|Name=mRNA_Ecto-sp13_S_contig2019.6622.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=393bp MNQQRSRRFRARKDMQEAKLIAESKGEVVDDTAVFDSNCITPGTEFMAKIback to top mRNA from alignment at Ecto-sp13_S_contig2019:3..7509+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig2019.6622.1 ID=mRNA_Ecto-sp13_S_contig2019.6622.1|Name=mRNA_Ecto-sp13_S_contig2019.6622.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7507bp|location=Sequence derived from alignment at Ecto-sp13_S_contig2019:3..7509+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig2019:3..7509+ >mRNA_Ecto-sp13_S_contig2019.6622.1 ID=mRNA_Ecto-sp13_S_contig2019.6622.1|Name=mRNA_Ecto-sp13_S_contig2019.6622.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1179bp|location=Sequence derived from alignment at Ecto-sp13_S_contig2019:3..7509+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |