mRNA_Ecto-sp13_S_contig20183.6619.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20183.6619.1 vs. uniprot
Match: D7FL73_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL73_ECTSI) HSP 1 Score: 384 bits (985), Expect = 1.060e-122 Identity = 193/198 (97.47%), Postives = 196/198 (98.99%), Query Frame = 1
Query: 1 IQLEDENSFTLNRRIPYLCLADCPLNTSVRDGLNSLPLEYVQVQGATRVDNPGVLMLSEFTSAMRVMRGAIRINPWKVEEVAHVMAEVVQVMTVKRRKERLSECLEYVNTNTTSYWAAQILTDLKAVGSSSNRSIMSPVGLGLNFRVVGMESNFSLLDVAAVMRGYRSAKRRVIFLDYGGTICTTPKRSIAYYAHANK 594
++LEDENSFTLNRRIPYLCLADC LNTSVRDGLNSLPLEYVQVQGATRVDNPGVLMLSEFTSAMRVMRGAIRINPWKVEEVAHVMAEVVQVMTVKRRKERLSECLEYVNTNTTSYWAAQIL DLKAVGSSSNRSIMSPVGLGLNFRVVGMESNFSLLDVAA+MRGYRSAKRRVIFLDYGGTICTTPKRSIAYYAHANK
Sbjct: 493 LELEDENSFTLNRRIPYLCLADCLLNTSVRDGLNSLPLEYVQVQGATRVDNPGVLMLSEFTSAMRVMRGAIRINPWKVEEVAHVMAEVVQVMTVKRRKERLSECLEYVNTNTTSYWAAQILMDLKAVGSSSNRSIMSPVGLGLNFRVVGMESNFSLLDVAALMRGYRSAKRRVIFLDYGGTICTTPKRSIAYYAHANK 690
BLAST of mRNA_Ecto-sp13_S_contig20183.6619.1 vs. uniprot
Match: V5K3Y9_SACJA (Trehalose-6-phosohate synthase n=1 Tax=Saccharina japonica TaxID=88149 RepID=V5K3Y9_SACJA) HSP 1 Score: 306 bits (783), Expect = 1.560e-93 Identity = 154/199 (77.39%), Postives = 175/199 (87.94%), Query Frame = 1
Query: 1 IQLEDENSFTLNRRIPYLCLADCPLNTSVRDGLNSLPLEYVQVQGATRVDNPGVLMLSEFTSAMRVMRGAIRINPWKVEEVAHVMAEVVQVMTVKRRKERLSECLEYVNTNTTSYWAAQILTDLKAVGSSSNRSIMSPVGLGLNFRVVGMESNFSLLDVAAVMRGYRSAKRRVIFLDYGGTICTTPKRSIAYYAHANKV 597
+QLEDE+SF +R+PYLCLADC +NT+VRDGLN+LPLEYV V + R +NPGV+MLSEFTS MRVMRGAIRINPWKVEEVA V+AEV Q M V+ R ERL++ LEYV +NTTSYWAAQILTDLKAVG S++RSI+SPVGLGLNFRVVGMESNF LLDVA+VMR YR AKRRVIFLDYGGT+C T KRSIAYYAHANK+
Sbjct: 533 LQLEDEHSF---QRLPYLCLADCLINTAVRDGLNNLPLEYVFVHESARKNNPGVMMLSEFTSCMRVMRGAIRINPWKVEEVADVLAEVAQPMRVELRSERLAQGLEYVTSNTTSYWAAQILTDLKAVGRSADRSILSPVGLGLNFRVVGMESNFGLLDVASVMRSYRPAKRRVIFLDYGGTVCETAKRSIAYYAHANKL 728
BLAST of mRNA_Ecto-sp13_S_contig20183.6619.1 vs. uniprot
Match: A0A7S2UVC1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVC1_9STRA) HSP 1 Score: 177 bits (450), Expect = 3.560e-48 Identity = 92/192 (47.92%), Postives = 131/192 (68.23%), Query Frame = 1
Query: 28 TLNRRIPYLCLADCPLNTSVRDGLNSLPLEYVQVQGATRVDNPGVLMLSEFTSAMRVMRGAIRINPWKVEEVAHVMAEVVQVMTVKRRKERLSECLEYVNTNTTSYWAAQILTDLKAVGSSSNRSIMSPVGLGLNFRVVGMESNFSLLDVAAVMRGYRSAKRRVIFLDYGGTICTT--PKRSIAYYAHANKV 597
+L RR+ L ADC +NT+VRDGLN PLE+V R PG+L+LSEFTS MRV+RG + +NPWKVEEVAH M VQ M+ + +ER ++ YV +T+S+WA Q L DLK+V + +R +S VGLGL FRV+GM++ F+ LD + V++ Y+ + R+IFLD+GGTI +S+ +YA A+++
Sbjct: 319 SLTRRLALLARADCFVNTAVRDGLNKYPLEFVAAHKVIRPTQPGILLLSEFTSTMRVLRGPLHVNPWKVEEVAHAMFTAVQ-MSEEECRERHNKDSNYVMRHTSSFWAYQNLLDLKSVRKTKDRMQLSCVGLGLGFRVLGMDAGFNTLDSSDVIKAYKPTRHRLIFLDFGGTIHVNHDQTQSVMHYAVASRI 509
BLAST of mRNA_Ecto-sp13_S_contig20183.6619.1 vs. uniprot
Match: A0A835YZM5_9STRA (Glycosyltransferase family 20-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZM5_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.000e-38 Identity = 109/325 (33.54%), Postives = 139/325 (42.77%), Query Frame = 1
Query: 10 EDENSFTLNRRIPYLCLADCPLNTSVRDGLNSLPLEYVQVQGATRVDNPGVLMLSE-----------FTSAMRVMRGAIRINPWKVEEVAHVMAEVVQVMTVKRRKERLSECLEYVNTNTTSYWAAQ----------------------------------------------------------------------------------------------------------------------------------------ILTDLKAVGSSSNRSIMSPVGLGLNFRVVGMESNFSLLDVAAVMRGYRSAKRRVIFLDYGGT 543
+DE SFTL +R+PYLCLADC +NT+VRDGLN LPLE+ R PGV+MLSE FTS MRV+RGA+RINPWKV+EVA MA + M+++ R R ++ ++V +TTS+WA Q +L DLK++ S++RSIMSPVGLGLNFRV+GM++ FS LD +AVMR YR AK R+IFLDYGGT
Sbjct: 775 KDEASFTLQQRLPYLCLADCLVNTAVRDGLNRLPLEFAIAHTVHRPQCPGVVMLSEXXXXXXXXXXEFTSCMRVLRGAVRINPWKVDEVAASMAATLD-MSLETRLARHAKDEDFVVNHTTSFWAYQANNAKAATREKVATTAWQSAGYVRSVVIRGGRPHVFRFAVTKQSECASITGDIMRAAGVDLSLTSQVVEAMWVKGVITPDMFITRGVAAEKRRDDAGVATFARPHTGARLVVAQAVLANVVTPVSPYPPYFSAILLVLKDLKSIQKSADRSIMSPVGLGLNFRVIGMDAGFSPLDNSAVMRTYRPAKHRIIFLDYGGT 1098
BLAST of mRNA_Ecto-sp13_S_contig20183.6619.1 vs. uniprot
Match: A0A7S2BXE3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BXE3_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.510e-37 Identity = 82/205 (40.00%), Postives = 125/205 (60.98%), Query Frame = 1
Query: 13 DENSFTLNRRIPYLCLADCPLNTSVRDGLNSLPLEYVQVQ------GATRVDN--PGVLMLSEFTSAMRVMRGAIRINPWKVEEVAHVMAEVVQVMTVKRRKERLSECLEYVNTNTTSYWAAQILTDLKAVGSSSNRSIMSPVGLGLNFRVVGMESNFSLLDVAAVMRGYRSAKRRVIFLDYGGTICT--TPKRSIAYYAHANKV 597
+E+ L R+ L +AD L+T+VRDGLN P EYV Q G+ V++ PG+++LS+FTS RV+ GA+ +NPW++++VA+ + V +M+ + R +R ++YV NTT+ W + L DLK V N + GL L RV M++ F+ LD+ V+ YRS+K+R+I LDYGGTI + K +IA++A A V
Sbjct: 91 EESQLPLKDRLGLLSVADVLLSTTVRDGLNRWPFEYVLAQSQQQGPGSEYVESRPPGIMILSDFTSCTRVLHGALHVNPWQIDQVANQILRSV-MMSAEERMDRFKMDVDYVTLNTTATWCRRCLQDLKNVQKDKNHKMYVTTGLALTTRVNAMDAGFNALDIGQVVTKYRSSKKRLILLDYGGTIYSDEVQKDNIAHFAVATSV 294
BLAST of mRNA_Ecto-sp13_S_contig20183.6619.1 vs. uniprot
Match: A0A7S2BW05_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BW05_9STRA) HSP 1 Score: 146 bits (369), Expect = 3.940e-37 Identity = 82/205 (40.00%), Postives = 125/205 (60.98%), Query Frame = 1
Query: 13 DENSFTLNRRIPYLCLADCPLNTSVRDGLNSLPLEYVQVQ------GATRVDN--PGVLMLSEFTSAMRVMRGAIRINPWKVEEVAHVMAEVVQVMTVKRRKERLSECLEYVNTNTTSYWAAQILTDLKAVGSSSNRSIMSPVGLGLNFRVVGMESNFSLLDVAAVMRGYRSAKRRVIFLDYGGTICT--TPKRSIAYYAHANKV 597
+E+ L R+ L +AD L+T+VRDGLN P EYV Q G+ V++ PG+++LS+FTS RV+ GA+ +NPW++++VA+ + V +M+ + R +R ++YV NTT+ W + L DLK V N + GL L RV M++ F+ LD+ V+ YRS+K+R+I LDYGGTI + K +IA++A A V
Sbjct: 537 EESQLPLKDRLGLLSVADVLLSTTVRDGLNRWPFEYVLAQSQQQGPGSEYVESRPPGIMILSDFTSCTRVLHGALHVNPWQIDQVANQILRSV-MMSAEERMDRFKMDVDYVTLNTTATWCRRCLQDLKNVQKDKNHKMYVTTGLALTTRVNAMDAGFNALDIGQVVTKYRSSKKRLILLDYGGTIYSDEVQKDNIAHFAVATSV 740
BLAST of mRNA_Ecto-sp13_S_contig20183.6619.1 vs. uniprot
Match: A0A1Z5JS81_FISSO (Trehalose 6-phosphate synthase/phosphatase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JS81_FISSO) HSP 1 Score: 143 bits (360), Expect = 6.450e-36 Identity = 80/189 (42.33%), Postives = 109/189 (57.67%), Query Frame = 1
Query: 1 IQLEDENSFTLNRRIPYLCLADCPLNTSVRDGLNSLPLEYVQVQGATRVD-------NPGVLMLSEFTSAMRVMRGAIRINPWKVEEVAHVMAEVVQVMTVKRRKERLSECLEYVNTNTTSYWAAQILTDLKAVGSSSNRSIMSPVGLGLNFRVVGMESNFSLLDVAAVMRGYRSAKRRVIFLDYGGTI 546
+Q+ E L +R+ L AD + TS+RDGLN LPLE+ D G+ +LSEF+S+ RVMRGA+ INPWK+ E+A + M + R RLS E+V TT WA ++ DLK V + N S GLGLN+R++GM++ F+ LD A V R Y+ +K R+I LDYGGTI
Sbjct: 640 LQILHEREIRLQQRVALLRAADVCVVTSIRDGLNLLPLEFTIAHQDALTDLGRADGRKRGICILSEFSSSTRVMRGALHINPWKISEIASAFFQAAN-MQEEERLRRLSIASEFVTRVTTQRWALAVMLDLKGVHKNINPVQFSGAGLGLNYRLLGMDTGFTSLDSALVTRAYKKSKARLILLDYGGTI 827
BLAST of mRNA_Ecto-sp13_S_contig20183.6619.1 vs. uniprot
Match: A0A7S3Q2V3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q2V3_9STRA) HSP 1 Score: 143 bits (360), Expect = 6.470e-36 Identity = 76/184 (41.30%), Postives = 113/184 (61.41%), Query Frame = 1
Query: 16 ENSFTLNRRIPYLCLADCPLNTSVRDGLNSLPLEYVQV-------QGATRVDNPGVLMLSEFTSAMRVMRGAIRINPWKVEEVAHVMAEVVQVMTVKRRKERLSECLEYVNTNTTSYWAAQILTDLKAVGSSSNRSIMSPVGLGLNFRVVGMESNFSLLDVAAVMRGYRSAKRRVIFLDYGGTI 546
E L +RI + +D + T +RDGLN +PLE+ V +G + G+ +LSEF+S+ RVMRGA+ +NPWK+ E+A+ + + M++ R RL+ E+V+ TT WA +L DLKAV S++ + S GLGL +R++GM F LD +AV + Y+ A+ R+IFLDYGGTI
Sbjct: 658 EAEMRLPQRIALMRASDVIMVTPIRDGLNLIPLEFTAVHQDALTEEGRSDGRRRGICILSEFSSSTRVMRGALHVNPWKISELANSFHQALN-MSIDERMRRLNTASEFVSRVTTERWAMAVLLDLKAVQKSADVGMYSGAGLGLGYRILGMNRGFESLDASAVSKAYKKARGRLIFLDYGGTI 840
BLAST of mRNA_Ecto-sp13_S_contig20183.6619.1 vs. uniprot
Match: A0A7S2Y679_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y679_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.200e-35 Identity = 79/184 (42.93%), Postives = 108/184 (58.70%), Query Frame = 1
Query: 16 ENSFTLNRRIPYLCLADCPLNTSVRDGLNSLPLEY-------VQVQGATRVDNPGVLMLSEFTSAMRVMRGAIRINPWKVEEVAHVMAEVVQVMTVKRRKERLSECLEYVNTNTTSYWAAQILTDLKAVGSSSNRSIMSPVGLGLNFRVVGMESNFSLLDVAAVMRGYRSAKRRVIFLDYGGTI 546
E+ L +R+ L AD + TS+RDGLN LPLEY + G G+ +LSEF S RVMRGA+ +NPWK+ E+A+ + + M+ R R+ E+V TT WA ++ DLK V + N MS GLGLNFR++GM++ F+ L V V + YR+AK R+I LDYGGTI
Sbjct: 638 ESEMRLQQRMSILRAADLVVVTSIRDGLNLLPLEYTIAHQDALTEMGRKDGRKRGLCILSEFASCTRVMRGALHVNPWKISEIANAFHQALN-MSEDERLRRIGIASEFVTRVTTQRWALAVMLDLKGVHKNMNPVQMSGAGLGLNFRMLGMDTGFNSLSVNVVAKAYRTAKNRLILLDYGGTI 820
BLAST of mRNA_Ecto-sp13_S_contig20183.6619.1 vs. uniprot
Match: B8BYN3_THAPS (Trehalose-6-phosphate synthase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYN3_THAPS) HSP 1 Score: 138 bits (348), Expect = 2.280e-34 Identity = 75/184 (40.76%), Postives = 108/184 (58.70%), Query Frame = 1
Query: 16 ENSFTLNRRIPYLCLADCPLNTSVRDGLNSLPLEY-------VQVQGATRVDNPGVLMLSEFTSAMRVMRGAIRINPWKVEEVAHVMAEVVQVMTVKRRKERLSECLEYVNTNTTSYWAAQILTDLKAVGSSSNRSIMSPVGLGLNFRVVGMESNFSLLDVAAVMRGYRSAKRRVIFLDYGGTI 546
E+ L +R+ L AD + T++RDGLN +PLE+ + QG G+ +LSEF+S RVMRGA+ +NPWK+ E+A + + M+ R R+S E+V TT WA ++ DLK V + + + GLGL FR++GM+S F+ LD V R YR++K R+I LDYGGTI
Sbjct: 351 ESEMRLQQRMALLRAADIVMVTTIRDGLNLIPLEFTIAHLDALSEQGRNDGRKRGLCILSEFSSCTRVMRGALHVNPWKISEIATAFFQAL-TMSEDERMRRISIASEFVTRVTTQRWALAVMLDLKGVQKNEDAGRYAGAGLGLGFRLLGMDSKFNSLDANTVARAYRNSKSRLILLDYGGTI 533 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20183.6619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20183.6619.1 >prot_Ecto-sp13_S_contig20183.6619.1 ID=prot_Ecto-sp13_S_contig20183.6619.1|Name=mRNA_Ecto-sp13_S_contig20183.6619.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=199bp IQLEDENSFTLNRRIPYLCLADCPLNTSVRDGLNSLPLEYVQVQGATRVDback to top mRNA from alignment at Ecto-sp13_S_contig20183:31..1555+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20183.6619.1 ID=mRNA_Ecto-sp13_S_contig20183.6619.1|Name=mRNA_Ecto-sp13_S_contig20183.6619.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1525bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20183:31..1555+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20183:31..1555+ >mRNA_Ecto-sp13_S_contig20183.6619.1 ID=mRNA_Ecto-sp13_S_contig20183.6619.1|Name=mRNA_Ecto-sp13_S_contig20183.6619.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=597bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20183:31..1555+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |