mRNA_Ecto-sp13_S_contig20173.6614.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20173.6614.1 vs. uniprot
Match: A0A6H5L759_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L759_9PHAE) HSP 1 Score: 355 bits (910), Expect = 2.080e-117 Identity = 175/180 (97.22%), Postives = 176/180 (97.78%), Query Frame = 1
Query: 10 SGTDQVLTLIPGWACFFYLLYSMTDDAEIKGFDPFAILGVTPSTEAREIKKQYRALSLIYHPDKNPDNKVAEDMFMKIAKAYEALTDQTAMDNWRKFGNPDGKQPMEVSIALPTFLLEKEHHNTILIIYLIAMVVIIPSIVAMWYARSKKYGEKNVMYDSYAWYNHMLSDSSEMKNMPEV 549
S +VLTLIPGWACFFYLL SMTDDAEIKGFDPFAILGVTPSTEAREIKKQYRALSLIYHPDKNPDNKVAEDMFMKIAKAYEALTDQTAMDNWRKFGNPDGKQPMEVSIALPTFLLEKEHHNTILIIYLIAMVVIIPSIVAMWYARSKKYGEKNVMYDSYAWYNHMLSDSSEMKNMPEV
Sbjct: 71 SFVTKVLTLIPGWACFFYLLNSMTDDAEIKGFDPFAILGVTPSTEAREIKKQYRALSLIYHPDKNPDNKVAEDMFMKIAKAYEALTDQTAMDNWRKFGNPDGKQPMEVSIALPTFLLEKEHHNTILIIYLIAMVVIIPSIVAMWYARSKKYGEKNVMYDSYAWYNHMLSDSSEMKNMPEV 250
BLAST of mRNA_Ecto-sp13_S_contig20173.6614.1 vs. uniprot
Match: A0A835YIF4_9STRA (DnaJ-like/ Sec63 translocase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIF4_9STRA) HSP 1 Score: 237 bits (604), Expect = 1.510e-71 Identity = 115/177 (64.97%), Postives = 142/177 (80.23%), Query Frame = 1
Query: 22 QVLTLIPGWACFFYLLYSMTDDAE-IKGFDPFAILGVTPSTEAREIKKQYRALSLIYHPDKNPDNKVAEDMFMKIAKAYEALTDQTAMDNWRKFGNPDGKQPMEVSIALPTFLLEKEHHNTILIIYLIAMVVIIPSIVAMWYARSKKYGEKNVMYDSYAWYNHMLSDSSEMKNMPEV 549
+V +L+ GWA + LL SMT ++ + FDP+AILGV + + IK+ YR LSL YHPDKNP NKVAEDMFMKIAKAYEALTD A +N+ K+GNPDGKQPM VSIALPTFLL+K++HN+ILI+YLIAMV++IPS+VAMWYA SKKYGE NVMYD+Y WYNHML + + + + EV
Sbjct: 77 KVASLVIGWAIVYVLLSSMTGESVGLAQFDPYAILGVDVGADTKAIKRSYRNLSLKYHPDKNPGNKVAEDMFMKIAKAYEALTDPVARENYIKYGNPDGKQPMAVSIALPTFLLDKDYHNSILILYLIAMVIVIPSLVAMWYASSKKYGENNVMYDTYTWYNHMLGEGARVPQIAEV 253
BLAST of mRNA_Ecto-sp13_S_contig20173.6614.1 vs. uniprot
Match: A0A7S2UX51_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX51_9STRA) HSP 1 Score: 226 bits (575), Expect = 5.170e-71 Identity = 108/175 (61.71%), Postives = 139/175 (79.43%), Query Frame = 1
Query: 25 VLTLIPGWACFFYLLYSMTDDAEIKGFDPFAILGVTPSTEAREIKKQYRALSLIYHPDKNPDNKVAEDMFMKIAKAYEALTDQTAMDNWRKFGNPDGKQPMEVSIALPTFLLEKEHHNTILIIYLIAMVVIIPSIVAMWYARSKKYGEKNVMYDSYAWYNHMLSDSSEMKNMPEV 549
VL + W L+ ++ +DAEI FDP+AILGV ++ + +KK YR LSL YHPDKNP NK AE+MFMKIAKAYEALTD+TA +NW K+GNPDGKQ +EVSI LPTFLLE+ +HN ILI+YL+ +VVIIP IV +WYA+SK++GEKNVMYD+YA++NHMLS++ +K +PE
Sbjct: 81 VLVTVALWFVCIKLVLAVWNDAEIAVFDPYAILGVDVGSDDKVVKKAYRGLSLKYHPDKNPGNKFAEEMFMKIAKAYEALTDETAKENWEKYGNPDGKQALEVSIGLPTFLLEEGNHNMILIVYLLVLVVIIPVIVGLWYAQSKQFGEKNVMYDTYAFFNHMLSENCHLKMLPET 255
BLAST of mRNA_Ecto-sp13_S_contig20173.6614.1 vs. uniprot
Match: A0A835YN83_9STRA (DnaJ-like/ Sec63 translocase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN83_9STRA) HSP 1 Score: 226 bits (577), Expect = 1.670e-67 Identity = 105/177 (59.32%), Postives = 138/177 (77.97%), Query Frame = 1
Query: 22 QVLTLIPGWACFFYLLYSMTDDA-EIKGFDPFAILGVTPSTEAREIKKQYRALSLIYHPDKNPDNKVAEDMFMKIAKAYEALTDQTAMDNWRKFGNPDGKQPMEVSIALPTFLLEKEHHNTILIIYLIAMVVIIPSIVAMWYARSKKYGEKNVMYDSYAWYNHMLSDSSEMKNMPEV 549
++ TL+ GWA F+ L+ +M A + FDP+AILG+ E + IK+ YR LSL YHPDKNP +K+AEDMFMKIA+AY+ALTD + +NW K+GNPDGKQ M VSIALPT+LL+K HHN+ILI+YLIAMVV+IPS+VA+WYA S+KYG+ N++YD+Y WYNHM+ + +PEV
Sbjct: 77 KLATLVAGWAAFYALVSTMDGGAVSLAQFDPYAILGIDVGVEPKAIKRAYRTLSLQYHPDKNPGSKMAEDMFMKIARAYQALTDPKSKENWEKYGNPDGKQSMAVSIALPTWLLDKAHHNSILILYLIAMVVVIPSLVAVWYAGSRKYGDNNILYDTYTWYNHMVGEKMHTMQVPEV 253
BLAST of mRNA_Ecto-sp13_S_contig20173.6614.1 vs. uniprot
Match: F0YHJ2_AURAN (J domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHJ2_AURAN) HSP 1 Score: 211 bits (537), Expect = 4.750e-62 Identity = 102/176 (57.95%), Postives = 132/176 (75.00%), Query Frame = 1
Query: 22 QVLTLIPGWACFFYLLYSMTDDAEIKGFDPFAILGVTPSTEAREIKKQYRALSLIYHPDKNPDNKVAEDMFMKIAKAYEALTDQTAMDNWRKFGNPDGKQPMEVSIALPTFLLEKEHHNTILIIYLIAMVVIIPSIVAMWYARSKKYGEKNVMYDSYAWYNHMLSDSSEMKNMPEV 549
+ L WA L+ ++T DAE+ FDPF ILGV P+ E +EI+K YR LSL YHPDKN NK+AE+MFMK+AKAYEALTD+ A NW ++GNPDGKQ +EVSI LPTFLL++ +H IL IYL +VVIIP+IVA WY S+K+GE NVMY++Y+++ H+LS+ S K +PEV
Sbjct: 77 HIALLTVAWAILLMLIRALTFDAELASFDPFKILGVDPNAEDKEIRKAYRKLSLEYHPDKNQGNKLAEEMFMKVAKAYEALTDEEAKKNWLEYGNPDGKQSLEVSIGLPTFLLDESNHYAILCIYLGILVVIIPAIVAAWYQHSRKFGENNVMYETYSFFLHVLSEHSTAKMLPEV 252
BLAST of mRNA_Ecto-sp13_S_contig20173.6614.1 vs. uniprot
Match: A0A6S8WZP9_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8WZP9_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.200e-61 Identity = 101/172 (58.72%), Postives = 131/172 (76.16%), Query Frame = 1
Query: 34 LIPGWACFFYLLYSMTDDAEIKGFDPFAILGVTPSTEAREIKKQYRALSLIYHPDKNPDNKVAEDMFMKIAKAYEALTDQTAMDNWRKFGNPDGKQPMEVSIALPTFLLEKEHHNTILIIYLIAMVVIIPSIVAMWYARSKKYGEKNVMYDSYAWYNHMLSDSSEMKNMPEV 549
L+ W L+ ++T DAE+ FDPF ILGV + E +EI+K YR LSL YHPDKNP NK+AE+MFMK+AKAYEALTD A NW ++GNPDGKQ +EVSI LPTFLL++ +H IL IYL +VVIIP+IVA WY S+K+GE NVMY++Y+++ H+LS+ S +K +PEV
Sbjct: 81 LVTAWVVLLMLIRALTFDAELASFDPFKILGVASNAEDKEIRKAYRKLSLEYHPDKNPGNKIAEEMFMKVAKAYEALTDDEAKRNWLEYGNPDGKQSLEVSIGLPTFLLDEANHYAILCIYLGVLVVIIPAIVAAWYQYSRKFGENNVMYETYSFFLHVLSEHSTVKMLPEV 252
BLAST of mRNA_Ecto-sp13_S_contig20173.6614.1 vs. uniprot
Match: A0A7S0CFH9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CFH9_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.200e-60 Identity = 95/177 (53.67%), Postives = 132/177 (74.58%), Query Frame = 1
Query: 19 DQVLTLIPGWACFFYLLYSMTDDAEIKGFDPFAILGVTPSTEAREIKKQYRALSLIYHPDKNPDNKVAEDMFMKIAKAYEALTDQTAMDNWRKFGNPDGKQPMEVSIALPTFLLEKEHHNTILIIYLIAMVVIIPSIVAMWYARSKKYGEKNVMYDSYAWYNHMLSDSSEMKNMPEV 549
+ V+T+I C YL+ ++ ++EI FDPF+IL + + E +EIKK Y+ SL+YHPDKNP N AE MF+K+AKAYEALTD+TA DNW K+GNPDGKQ +EVSI LPT LL+ + N IL++YL+ MVV+IP V +Y+ S KYGEK+VMYD+Y+W++H L++ + K++PE
Sbjct: 53 NVVITVILSGVCV-YLVSQLSSNSEINTFDPFSILEIDSNAEKKEIKKAYKKKSLMYHPDKNPGNSAAEAMFIKVAKAYEALTDETARDNWEKYGNPDGKQNLEVSIGLPTLLLDTSNRNIILLVYLLIMVVLIPLAVYKYYSDSSKYGEKDVMYDTYSWFHHSLNEHTMAKSIPET 228
BLAST of mRNA_Ecto-sp13_S_contig20173.6614.1 vs. uniprot
Match: A0A7R9UDC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDC6_9STRA) HSP 1 Score: 206 bits (524), Expect = 2.080e-59 Identity = 96/168 (57.14%), Postives = 128/168 (76.19%), Query Frame = 1
Query: 46 WACFFYLLYSMTDDAEIKGFDPFAILGVTPSTEAREIKKQYRALSLIYHPDKNPDNKVAEDMFMKIAKAYEALTDQTAMDNWRKFGNPDGKQPMEVSIALPTFLLEKEHHNTILIIYLIAMVVIIPSIVAMWYARSKKYGEKNVMYDSYAWYNHMLSDSSEMKNMPEV 549
W YL ++DDAEIK FDPFAILGV P+ +IKK YR +SLIYHPDKNP NK AE MFM +AKAY ALTD A +NW K+GNPDGKQ +E+S+ LP++L++K++H+ IL++YL+A+VV+IP IV WY++SK+YGEK VM+D+Y + L++ MK +PEV
Sbjct: 85 WVLLVYLAILVSDDAEIKQFDPFAILGVDPAATEAQIKKAYRKMSLIYHPDKNPGNKQAEQMFMLVAKAYGALTDPVAKENWEKYGNPDGKQSLELSVGLPSWLIDKDNHSLILVMYLVALVVVIPLIVGCWYSQSKRYGEKMVMFDTYHRFYRALNEKITMKMLPEV 252
BLAST of mRNA_Ecto-sp13_S_contig20173.6614.1 vs. uniprot
Match: A0A1Z5KQ30_FISSO (Translocation protein SEC63 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ30_FISSO) HSP 1 Score: 204 bits (519), Expect = 3.810e-59 Identity = 97/179 (54.19%), Postives = 134/179 (74.86%), Query Frame = 1
Query: 13 GTDQVLTLIPGWACFFYLLYSMTDDAEIKGFDPFAILGVTPSTEAREIKKQYRALSLIYHPDKNPDNKVAEDMFMKIAKAYEALTDQTAMDNWRKFGNPDGKQPMEVSIALPTFLLEKEHHNTILIIYLIAMVVIIPSIVAMWYARSKKYGEKNVMYDSYAWYNHMLSDSSEMKNMPEV 549
G VLTLI F +LL S++ D ++ FDPF+IL + + + IKK YR+LSL YHPDKNP ++ AE MFM ++KAYEALTD+TA +NW K+GNPDGKQ +EVSI LP+FLL+ ++ N +L+ YL+ MVV+IP V +Y+ S KYGEKNVMYD+Y+W++H L+++S +K +PEV
Sbjct: 79 GITSVLTLI-----FIWLLISVSQDGQVNSFDPFSILQIDAGADNKTIKKAYRSLSLKYHPDKNPGDRAAEAMFMMVSKAYEALTDETARENWEKYGNPDGKQSLEVSIGLPSFLLDSKNRNLVLVAYLLFMVVLIPYFVWRYYSDSSKYGEKNVMYDTYSWFHHALNENSIVKALPEV 252
BLAST of mRNA_Ecto-sp13_S_contig20173.6614.1 vs. uniprot
Match: A0A7S2RLE2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLE2_9STRA) HSP 1 Score: 201 bits (511), Expect = 9.050e-58 Identity = 90/182 (49.45%), Postives = 133/182 (73.08%), Query Frame = 1
Query: 4 NVSGTDQVLTLIPGWACFFYLLYSMTDDAEIKGFDPFAILGVTPSTEAREIKKQYRALSLIYHPDKNPDNKVAEDMFMKIAKAYEALTDQTAMDNWRKFGNPDGKQPMEVSIALPTFLLEKEHHNTILIIYLIAMVVIIPSIVAMWYARSKKYGEKNVMYDSYAWYNHMLSDSSEMKNMPEV 549
N ++ L+ F YL+ ++ D+E+ FDPF ILGV P ++IK+ YR SL YHPDKN D+K AE MFM +AKA++ALTD+ A +NW K+GNPDG+Q +E+SI LP+F L+ ++HN ILI YL+ +VV+IP+IV +WY+ S+++GE NVMYDSY ++ +L+++S +K++PEV
Sbjct: 70 NTCFVANLMALLCVTLIFVYLIIQVSSDSELAHFDPFKILGVDPGATEKQIKRAYRVKSLQYHPDKNKDDKNAEQMFMMVAKAHQALTDEEARENWEKYGNPDGRQALEISIGLPSFFLDTDYHNMILIFYLVCLVVVIPAIVGLWYSHSRQFGENNVMYDSYRFFQALLTETSHIKSIPEV 251 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20173.6614.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20173.6614.1 >prot_Ecto-sp13_S_contig20173.6614.1 ID=prot_Ecto-sp13_S_contig20173.6614.1|Name=mRNA_Ecto-sp13_S_contig20173.6614.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=188bp INVSGTDQVLTLIPGWACFFYLLYSMTDDAEIKGFDPFAILGVTPSTEARback to top mRNA from alignment at Ecto-sp13_S_contig20173:487..3029+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20173.6614.1 ID=mRNA_Ecto-sp13_S_contig20173.6614.1|Name=mRNA_Ecto-sp13_S_contig20173.6614.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2543bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20173:487..3029+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20173:487..3029+ >mRNA_Ecto-sp13_S_contig20173.6614.1 ID=mRNA_Ecto-sp13_S_contig20173.6614.1|Name=mRNA_Ecto-sp13_S_contig20173.6614.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=564bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20173:487..3029+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |