mRNA_Ecto-sp13_S_contig20170.6613.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20170.6613.1 vs. uniprot
Match: D8LS34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS34_ECTSI) HSP 1 Score: 421 bits (1082), Expect = 1.480e-147 Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 1
Query: 7 GVAELYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTISTRGKNVTKEMDFVVQNIQQEPEALDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRGTNKFTVKYFLNLVLVDEEDRR 639
G ELYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTISTRGKNVTKEMDFVVQNIQQEPEALDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRGTNKFTVKYFLNLVLVDEEDRR
Sbjct: 73 GQIELYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTISTRGKNVTKEMDFVVQNIQQEPEALDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRGTNKFTVKYFLNLVLVDEEDRR 283
BLAST of mRNA_Ecto-sp13_S_contig20170.6613.1 vs. uniprot
Match: A0A836CB39_9STRA (Vacuolar protein sorting-associated protein 26-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB39_9STRA) HSP 1 Score: 329 bits (843), Expect = 3.610e-111 Identity = 158/213 (74.18%), Postives = 186/213 (87.32%), Query Frame = 1
Query: 7 GVAELYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTISTRGKNVTKEMDFVVQNIQ-QEPEALDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRG-TNKFTVKYFLNLVLVDEEDRR 639
G ELYYDRGNHY+FSS+VRELDTA +LVGNRQ+ FDF+ +KPYESYSGLNVRLRYFVRVTI+ +TK+ +F VQN++ +EP SLKMEVGIE+CLHIEFEYDKS YHL+DV+IGKIYFLLVRIKIKHME+A++RRE AG+G+ YNESET++KYEVMDGAP KGECVPLR+FLKPY LTPTY+ NKF+V+Y+LNLVLVDEEDRR
Sbjct: 72 GQIELYYDRGNHYKFSSLVRELDTANSLVGNRQFLFDFSNVDKPYESYSGLNVRLRYFVRVTITRNYGTITKDFEFAVQNVEPEEPVMNPSLKMEVGIEECLHIEFEYDKSKYHLRDVIIGKIYFLLVRIKIKHMELAVVRREAAGSGATVYNESETVVKYEVMDGAPVKGECVPLRLFLKPYDLTPTYKSINNKFSVRYYLNLVLVDEEDRR 284
BLAST of mRNA_Ecto-sp13_S_contig20170.6613.1 vs. uniprot
Match: A0A7S2UYV3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYV3_9STRA) HSP 1 Score: 298 bits (764), Expect = 3.890e-99 Identity = 144/215 (66.98%), Postives = 180/215 (83.72%), Query Frame = 1
Query: 7 GVAELYYDRGNHYEFSSVVRELDTAGALVG-NRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTIS-TRGKNVTKEMDFVVQNIQQEPEAL-DSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRGTN-KFTVKYFLNLVLVDEEDRR 639
G E++YDRGN Y+F+S+VREL+ AG + G +R Y FDF+ +KPYESYSG+NVRLRYFVRVTI+ + G N+ KE +F+VQ E A+ ++LKMEVGIEDCLHIEFEYDK+ YHL DV++GK++FLLVRIKIKHME+AIIRRE GTGSNQYNE+ET+ K+E+MDGAP KGEC+P+R+FL Y LTPTYR N +F+V+Y+LNLVLVDEEDRR
Sbjct: 72 GQIEMFYDRGNSYDFTSIVRELEAAGVMEGGSRNYTFDFSTVDKPYESYSGINVRLRYFVRVTITRSYGSNIIKEEEFLVQTPSTEETAMTNTLKMEVGIEDCLHIEFEYDKNRYHLADVILGKVFFLLVRIKIKHMEVAIIRREACGTGSNQYNETETLTKFEIMDGAPVKGECIPVRLFLSQYNLTPTYRNVNNRFSVRYYLNLVLVDEEDRR 286
BLAST of mRNA_Ecto-sp13_S_contig20170.6613.1 vs. uniprot
Match: A0A6S8R4Z0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8R4Z0_9STRA) HSP 1 Score: 298 bits (763), Expect = 4.680e-99 Identity = 145/214 (67.76%), Postives = 178/214 (83.18%), Query Frame = 1
Query: 7 GVAELYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTISTRG--KNVTKEMDFVVQNIQQEPEALDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRG-TNKFTVKYFLNLVLVDEEDRR 639
G EL++DRG +Y+F+ V+RELD G L+G ++Y FD + AEKPYESY+GLNVRLRYFVRVT+ TRG ++ KE +F+VQ Q PE +KMEVGIE+CLHIEFEYDKS YHL DVV+GK+YFLLVRIKIKHME+A+IRRE AG G NQ+NESETI KYEVMDGAP +GECVP+R+FL+ + LTPTYRG NKF+V+Y+LNLVLVD+E+RR
Sbjct: 70 GQIELFHDRGTYYDFTCVLRELDVPGVLMGQQRYAFDLSHAEKPYESYNGLNVRLRYFVRVTV-TRGYASSLIKEQEFIVQVSQPAPETNTPVKMEVGIEECLHIEFEYDKSKYHLADVVVGKVYFLLVRIKIKHMELAVIRREAAGAGPNQHNESETITKYEVMDGAPVRGECVPIRLFLRNFNLTPTYRGINNKFSVRYYLNLVLVDQEERR 282
BLAST of mRNA_Ecto-sp13_S_contig20170.6613.1 vs. uniprot
Match: UPI0001CBA3F0 (vacuolar protein sorting-associated protein 26B-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBA3F0) HSP 1 Score: 293 bits (750), Expect = 8.770e-97 Identity = 141/214 (65.89%), Postives = 174/214 (81.31%), Query Frame = 1
Query: 1 YFGVAELYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTISTRGKNVTKEMDFVVQNIQQEPEALDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRGTNK-FTVKYFLNLVLVDEEDRR 639
+ G ELYYDRGNH+EF+S+V+EL G L + Y FDF EKPYESY+G NVRLRYF+RVTI+ R +VT+EMD +V + Q PE +S+KMEVGIEDCLHIEFEY+KS YHL+DV++GKIYFLLVRIKIKHME+AII+RET G+G N +NE+ETI KYE+MDGAP +GE +P+R+FL Y LTPT R NK F+V+Y+LNLVLVDEE+RR
Sbjct: 67 FIGQIELYYDRGNHHEFTSLVKELARPGELTQSTTYDFDFVQVEKPYESYTGANVRLRYFLRVTIAKRLTDVTREMDIIVHTLSQYPEMNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMELAIIKRETTGSGPNTFNENETIAKYEIMDGAPVRGESIPIRLFLAGYDLTPTMRDINKKFSVRYYLNLVLVDEEERR 280
BLAST of mRNA_Ecto-sp13_S_contig20170.6613.1 vs. uniprot
Match: W7TAJ9_9STRA (Vacuolar protein sorting-associated protein 26 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAJ9_9STRA) HSP 1 Score: 292 bits (747), Expect = 1.480e-96 Identity = 140/213 (65.73%), Postives = 176/213 (82.63%), Query Frame = 1
Query: 7 GVAELYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTISTR-GKNVTKEMDFVVQNIQQEPEALDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRGTN-KFTVKYFLNLVLVDEEDRR 639
G E+ DRG+ +EF+++V+ELDTAG L ++QY FDF +KPY+SY+GLNVRLRYF++VT++ + N+ E + VVQ+ Q PE+ S+KMEVGIEDCLHIEFEYDK YHL+DV++GKIYFLLVRIKIKHME+AIIRRE+AGTG+N NESET+ K+EVMDGAP KGEC+PLR+FL ALTPTYR N +F+V+Y+LNLVLVDEEDRR
Sbjct: 74 GAIEMLQDRGSVHEFTNLVKELDTAGVLFSDKQYTFDFATVDKPYDSYTGLNVRLRYFLKVTVTRQYAPNLVAEQELVVQSTTQVPESHSSIKMEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGANVMNESETLCKFEVMDGAPVKGECIPLRLFLSSIALTPTYRSVNNRFSVRYYLNLVLVDEEDRR 286
BLAST of mRNA_Ecto-sp13_S_contig20170.6613.1 vs. uniprot
Match: A0A6A7GAN3_9CRUS (Membrane coat complex Retromer (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GAN3_9CRUS) HSP 1 Score: 291 bits (746), Expect = 5.070e-96 Identity = 136/213 (63.85%), Postives = 173/213 (81.22%), Query Frame = 1
Query: 7 GVAELYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTIS-TRGKNVTKEMDFVVQNIQQEPEALDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRGT-NKFTVKYFLNLVLVDEEDRR 639
G EL YDRGNHY F+S++RELD G L + + F+F EK YE+Y+G+NVRLRYFVRV IS + G N+ KE+DF VQN++ +PE ++LKMEVGIEDCLHIEFEYDKS YHL DV++GKIYFLLVRIKIKHME+ I++RE+ G G N YNE+E + K+E+MDGAP +GEC+P+R+FL P+ LTPT++ NKF+VKY+LNLVLVDEE+RR
Sbjct: 91 GQVELAYDRGNHYVFTSLIRELDAPGILTAEKTFSFEFANVEKQYETYNGVNVRLRYFVRVKISRSYGSNIKKEIDFAVQNVRPDPEINNTLKMEVGIEDCLHIEFEYDKSKYHLDDVIVGKIYFLLVRIKIKHMELQILKRESTGNGPNLYNETEIMTKFEIMDGAPVRGECIPIRLFLSPFDLTPTFKNVHNKFSVKYYLNLVLVDEEERR 303
BLAST of mRNA_Ecto-sp13_S_contig20170.6613.1 vs. uniprot
Match: UPI001B88904D (vacuolar protein sorting-associated protein 26B-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88904D) HSP 1 Score: 291 bits (744), Expect = 1.550e-95 Identity = 140/212 (66.04%), Postives = 169/212 (79.72%), Query Frame = 1
Query: 7 GVAELYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTISTRGKNVTKEMDFVVQNIQQEPEALDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRGTNK-FTVKYFLNLVLVDEEDRR 639
G ELYYDRGNH+EF+S+V+EL G L N Y F+F EKPYESY+G NVRLRYF+RVTI R +V KE D VV + Q P+ +S+KMEVGIEDCLHIEFEY+KS YHL+DV++GKIYFLLVRIKIKHME+ II+RET GTG N +NE+ETI KYE+MDGAP +GE +P+R+FL Y LTPT R NK F+V+Y+LNLVLVDEE+RR
Sbjct: 72 GQIELYYDRGNHHEFTSLVKELARPGELTQNASYNFEFQQVEKPYESYTGANVRLRYFLRVTIVKRLTDVVKEQDIVVHTLSQYPDMNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEVQIIKRETTGTGPNTFNENETIAKYEIMDGAPVRGESIPIRLFLSGYELTPTMRDINKKFSVRYYLNLVLVDEEERR 283
BLAST of mRNA_Ecto-sp13_S_contig20170.6613.1 vs. uniprot
Match: A0A8B8EXW5_CRAVI (vacuolar protein sorting-associated protein 26B-like n=4 Tax=Crassostrea TaxID=6564 RepID=A0A8B8EXW5_CRAVI) HSP 1 Score: 290 bits (741), Expect = 3.760e-95 Identity = 137/214 (64.02%), Postives = 169/214 (78.97%), Query Frame = 1
Query: 1 YFGVAELYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTISTRGKNVTKEMDFVVQNIQQEPEALDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRGTNK-FTVKYFLNLVLVDEEDRR 639
+ G ELYYDRGNH+EF+S+V+EL G + GN + F+F EKPYESY+G NVRLRYF+RVT+ R + KE D +V + Q PE S+KMEVGIEDCLHIEFEY+KS YHL+DV++GKIYFLLVRIKIKHME+ II+RE+ GTG N YNE+ETI KYE+MDGAP +GE +P+R+FL Y LTPT R NK F+V+Y+LNLVLVDEE+RR
Sbjct: 70 FIGQIELYYDRGNHHEFTSLVKELARPGEVTGNTTFAFEFQQVEKPYESYTGANVRLRYFLRVTVVKRLSDTVKEQDIIVHTLSQYPEMNSSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIQIIKRESTGTGPNTYNENETIAKYEIMDGAPVRGESIPIRLFLSGYELTPTMRDINKKFSVRYYLNLVLVDEEERR 283
BLAST of mRNA_Ecto-sp13_S_contig20170.6613.1 vs. uniprot
Match: A0A0N7ZCR9_SCYOL (Uncharacterized protein n=4 Tax=Portunidae TaxID=6757 RepID=A0A0N7ZCR9_SCYOL) HSP 1 Score: 293 bits (749), Expect = 4.640e-95 Identity = 141/212 (66.51%), Postives = 171/212 (80.66%), Query Frame = 1
Query: 7 GVAELYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTISTRGKNVTKEMDFVVQNIQQEPEALDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRGTNK-FTVKYFLNLVLVDEEDRR 639
G ELYYDRGNH+EF+S+V+EL G L N + F+FN EKPYESYSG NVRLRYF+RVTI R ++T+EMD +V + PE +S+KMEVGIEDCLHIEFEY+KS YHL+DV++GKIYFLLVRIKIKHME+AII+RET G+G N +NE+ETI KYE+MDGAP +GE +P+RVFL Y LTPT R NK F+V+Y LNLVLVDEE+RR
Sbjct: 49 GQIELYYDRGNHHEFTSLVKELARPGELTHNTSFEFEFNQVEKPYESYSGTNVRLRYFLRVTIVRRLSDITREMDLLVHTLSSYPEMNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIAIIKRETTGSGPNTFNENETIAKYEIMDGAPVRGESIPIRVFLAGYDLTPTMRDINKKFSVRYHLNLVLVDEEERR 260 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20170.6613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20170.6613.1 >prot_Ecto-sp13_S_contig20170.6613.1 ID=prot_Ecto-sp13_S_contig20170.6613.1|Name=mRNA_Ecto-sp13_S_contig20170.6613.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=214bp YFGVAELYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYback to top mRNA from alignment at Ecto-sp13_S_contig20170:1311..3164- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20170.6613.1 ID=mRNA_Ecto-sp13_S_contig20170.6613.1|Name=mRNA_Ecto-sp13_S_contig20170.6613.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1854bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20170:1311..3164- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20170:1311..3164- >mRNA_Ecto-sp13_S_contig20170.6613.1 ID=mRNA_Ecto-sp13_S_contig20170.6613.1|Name=mRNA_Ecto-sp13_S_contig20170.6613.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=642bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20170:1311..3164- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |