mRNA_Ecto-sp13_S_contig20160.6608.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig20160.6608.1
Unique NamemRNA_Ecto-sp13_S_contig20160.6608.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: D7FX27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX27_ECTSI)

HSP 1 Score: 861 bits (2224), Expect = 2.360e-301
Identity = 505/573 (88.13%), Postives = 520/573 (90.75%), Query Frame = 1
Query:    1 MLLLAFPGSEGSSCCLASGDWPLDPHEMLVHPQDLEHLRVPGFGYVEVNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PLAYCRAVPDDSLAPGETRAPAWLLRAAGVQPRQHLSISRPSEVQEAEKLAVPLRGDDQQQDHLLRARVDLALKHRHGEEDASAGDCLSPADNGNFSQNVNSGGYFSKCDSRAIARRVSGCMVREGSLLAAEVLGETVLLRVMAISCGNDDRGDASPVKRPLIINSGTEIAMVRTQEQERSRSSPVSWDGQPVSPGEEPSRRRR---RPQQQATKGCAETWARQAPGLEAALSELRALVLLSVGGNSGGAWSGVLPAGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAGSGQSGXXXXXXXXTR-ASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTAAGAAELELEPLATALQARPVAGS 1704
            MLLLAFP SEGSSCCL SGDWPLDPHE+LVHPQDLEHLRVPGFGYV VNR              XXXXXXXXXXXXXXXXXXXXXXXXX   PLAYCRAVPDDSLAPGETRAPAWLL AAGVQPRQHLSISRPSEVQEAE LAVPL GDDQQQ HL R RV LAL+HR GEEDASAG+  SPA NG  SQNV SGGY SKCDSRAIARRVSGCMVR+GSLLAAEVLGETVL+RVM ISCGNDD GDASPVKRPLIINSGT++A+V  QEQERSRSSPVSWDGQPVSPG E SRRRR   RPQQQATKGC ETWARQAPGLEAALSELRALVLLSVGG+SGGAWSGVLPAGVALCGPSGVGKTLSLDLLAEDLSENHG+HV+RLLGPQILAGSGQ GXXXXXXXX   ASA S+PLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGG TAPLGEGARANAALLEALDRASAI+GVAVLGATRRSPGGKGGAGW GLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLST AGAAELELEPL+TALQARP+AGS
Sbjct:    1 MLLLAFPSSEGSSCCLGSGDWPLDPHEILVHPQDLEHLRVPGFGYVAVNRNNGSGDADSSRSKGXXXXXXXXXXXXXXXXXXXXXXXXXRQKPLAYCRAVPDDSLAPGETRAPAWLLSAAGVQPRQHLSISRPSEVQEAENLAVPLGGDDQQQHHLPRVRVGLALEHRQGEEDASAGNRPSPAGNGIISQNVRSGGYVSKCDSRAIARRVSGCMVRDGSLLAAEVLGETVLMRVMGISCGNDDGGDASPVKRPLIINSGTKVALVGPQEQERSRSSPVSWDGQPVSPGGEQSRRRRPRRRPQQQATKGCTETWARQAPGLEAALSELRALVLLSVGGSSGGAWSGVLPAGVALCGPSGVGKTLSLDLLAEDLSENHGVHVIRLLGPQILAGSGQGGXXXXXXXXXXXASAASSPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGDTAPLGEGARANAALLEALDRASAIKGVAVLGATRRSPGGKGGAGWVGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTVAGAAELELEPLSTALQARPIAGS 573          
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: F0YIH9_AURAN (AAA domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIH9_AURAN)

HSP 1 Score: 69.3 bits (168), Expect = 1.260e-9
Identity = 88/252 (34.92%), Postives = 107/252 (42.46%), Query Frame = 1
Query:  943 GLEAALSELRALVLLSVGGNSGGAWSGVLPA-GVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAGSGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARAN--AALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTAAGAAELELEPLATALQAR 1689
            GLEA L  L  +VLL +   +  A  GV P  GV   GP G GKTL    LA  L+E     +    G      +G            RA          L     EARA+APS++ FDELD L  A G G  GG     GE A+ +  A LL  +D  S    V V+GAT R                        AL  A R+PGRFDR +    P  AQRE IL++  S+ A A+     PL  AL  R
Sbjct:    6 GLEAHLKSLEEMVLLPLKHPNLYASLGVAPPRGVLFHGPPGTGKTL----LARQLAEACSAELAHPGGVSFFVRNGADCLSKYVGEAERA----------LSTLFEEARAKAPSIIFFDELDGLAPARGSGRGGGG----GELAQHSVVATLLALMDGLSDRGDVVVIGATNRPD----------------------ALDPALRRPGRFDRELKFVAPDAAQREAILALHTSSWAPASRPR-PPLLKALAKR 216          
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: A0A4D9CZ55_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ55_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.240e-9
Identity = 80/245 (32.65%), Postives = 100/245 (40.82%), Query Frame = 1
Query:  925 WARQAPGLEAALSELRALVLLSVGGNSGGAWSGVLPA-GVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQI---LAGSGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGA------RANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLS 1629
            W     GLEA + ELR  V  S+         G+ PA G  L GPSG GKT  L   AE      G HVMR+ GP++   L G  +S                      L     EARARAP+V+V DE++AL              P  E A      R  A LL  LD    ++ V VL AT R                        AL  A R+PGR DR + +G P +A R  IL ++L+
Sbjct:  265 WWASVGGLEAVVDELRQGVEQSLDSPHVFLDRGLRPARGFLLVGPSGTGKTTLLRAAAEYFGRGRGYHVMRVAGPEVVGRLVGETES---------------------RLRRVFREARARAPTVMVLDEVEALC-------------PRREAASPDLDRRMVATLLALLDGFQGLDRVVVLAATSRPQ----------------------ALDPALRRPGRLDRELEVGVPGEAARGEILRVLLA 453          
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: A0A0E9NLR3_SAICN (Uncharacterized protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NLR3_SAICN)

HSP 1 Score: 65.9 bits (159), Expect = 1.540e-7
Identity = 63/217 (29.03%), Postives = 93/217 (42.86%), Query Frame = 1
Query: 1030 PAGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAGS-GQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTAAGAAELELEPLATA 1677
            P GV L GP G  KTL+   LA +     G++ M + GP+I     G+S                   +  +     +ARA +PS++ FDE+DA+  + GG +        G   R  AALL  LD   A+  V +L AT R                         + AA  +PGR DR + + PP    R+ IL + +S  + A ++ +E LA A
Sbjct:  577 PKGVLLYGPPGCSKTLTAKALATEA----GLNFMAVKGPEIFNKYVGES-------------------ERAIREVFRKARAASPSIIFFDEIDAIASSRGGSE--------GSSDRVLAALLNELDGIEALVNVTILAATNRPD----------------------VIDAALMRPGRLDRIIYVAPPDLDARKQILQIQISKMSVAGDISIEELADA 740          
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: A0A832S9P0_9EURY (CDC48 family AAA ATPase (Fragment) n=3 Tax=Methanoculleus sp. TaxID=90427 RepID=A0A832S9P0_9EURY)

HSP 1 Score: 65.5 bits (158), Expect = 2.010e-7
Identity = 64/198 (32.32%), Postives = 87/198 (43.94%), Query Frame = 1
Query: 1030 PAGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAG-SGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSM 1620
            P GV L GP G GKTL    +A+ ++   G + + + GPQ+L+   G+S                   +  +     +AR  APS++ FDELDAL  A GGG E   T  +      N  L E +D    + GV V+GAT R                         +  A  +PGRFDR V IG P +  RE ILS+
Sbjct:  491 PKGVLLYGPPGTGKTL----IAKAVASESGANFVPIKGPQLLSKWVGES-------------------ERAVREVFKKARQVAPSIIFFDELDALTPARGGGTESHVTESV-----LNQILTE-IDGLEELRGVVVMGATNRPD----------------------MVDPALLRPGRFDRLVYIGEPGREDREKILSI 637          
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: R9NY86_PSEHS (Cell division cycle protein n=1 Tax=Pseudozyma hubeiensis (strain SY62) TaxID=1305764 RepID=R9NY86_PSEHS)

HSP 1 Score: 65.5 bits (158), Expect = 2.090e-7
Identity = 66/215 (30.70%), Postives = 91/215 (42.33%), Query Frame = 1
Query: 1030 PAGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAGSGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGIL-SMVLSTAAGAAELELEPLA 1671
            P GV L GP G  KTL    +A  L+   G++ + + GP++   S   G        T                  +ARA APS++ FDE+DAL  +  G    G        +R  A LL  +D   A+  V V+GAT R                         L  A  +PGR DR V +GPP  A R+ IL + +   A GA +++LE LA
Sbjct:  629 PRGVLLYGPPGCSKTL----IARALATESGLNFLAVKGPELY--SKYVGESERAIRDT----------------FKKARAAAPSIIFFDEIDALSSSRDGDSSSGDAL----NSRIIATLLNEMDGIEAMSDVIVIGATNRPQ----------------------TLDPALLRPGRLDRLVYVGPPDHAARQQILRTRMAKMAVGADDVDLEKLA 795          
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: UPI0004449860 (AAA family ATPase n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI0004449860)

HSP 1 Score: 63.9 bits (154), Expect = 6.120e-7
Identity = 62/218 (28.44%), Postives = 91/218 (41.74%), Query Frame = 1
Query: 1030 PAGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQIL---AGSGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTAAGAAELELEPLAT 1674
            P GV LCGP G  KT+    LA   +   G++ + + GP++L    G  +                             +ARA APS++ FDE+DAL  +   G EGG+     EG   +  LL  +D    + GV V+GAT R                         +  A  +PGR DR + +GPP  A R  IL + +   +   +++ E LAT
Sbjct:  575 PKGVLLCGPPGCSKTV----LARATATESGVNFVAVRGPELLNKYVGESEKAVREI---------------------FRKARAAAPSIIFFDEIDALAISRSSGSEGGSH----EGVLTS--LLNEMDGVEELVGVTVVGATNRPE----------------------VIDPALMRPGRLDRILYVGPPDHAGRIEILKIRMRKMSVDPDVDFEELAT 739          
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: A0A3N5W929_9PLAN (AAA family ATPase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3N5W929_9PLAN)

HSP 1 Score: 61.2 bits (147), Expect = 9.950e-7
Identity = 59/197 (29.95%), Postives = 82/197 (41.62%), Query Frame = 1
Query: 1030 PAGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAGSGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSM 1620
            P G+ L GP G GKTL    +A +   N     + + GP++L  S   G        T                  +AR  +PS++ FDELDAL  A GGGD+G   +      R    +L  LD    +EGV V+GA+ R                         +  A  +PGRFDR V +G P++  R GI  +
Sbjct:   17 PKGIVLYGPPGTGKTLLARAVAGESEANF----VNIRGPELL--SKWVGESEKAVRET----------------FRKARQVSPSIIFFDELDALAPARGGGDDGSRVSE-----RVVNQILTELDGLVELEGVVVIGASNRPD----------------------IIDPALLRPGRFDRLVYVGEPSKEGRLGIFKI 164          
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: A0A485KZT0_9STRA (Aste57867_13866 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZT0_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.030e-6
Identity = 62/216 (28.70%), Postives = 95/216 (43.98%), Query Frame = 1
Query: 1030 PAGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAG-SGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTAAGAAELELEPLAT 1674
            P G+ L GP G  KTL+    A+ L+   G++ + + GP++ +   G+S                   +  +     +ARA APSV+ FDE+DA+  + GGG   G         R  + LL  LD   A++ V ++ AT R                         + AA  +PGR DR + +GPP +  R  IL++       AA++ LE LAT
Sbjct:  527 PKGILLYGPPGCSKTLT----AKALATEGGMNFIAIKGPELFSKWVGES-------------------EKAIQSIFRKARAAAPSVIFFDEIDAVASSRGGGSSSGVAD------RVLSQLLNELDGIEALKQVILVAATNRPD----------------------LIDAALMRPGRIDRVLYVGPPDEPARAEILAIHTRKMPLAADVALEALAT 691          
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: A0A256IES1_9EURY (AAA family ATPase n=5 Tax=Halorubrum TaxID=56688 RepID=A0A256IES1_9EURY)

HSP 1 Score: 63.2 bits (152), Expect = 1.030e-6
Identity = 76/229 (33.19%), Postives = 97/229 (42.36%), Query Frame = 1
Query:  943 GLEAALSELRALVLLSVGGNSGGAWSGVLP-AGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAG-SGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALF-DACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSM 1620
            GL+AA+  LR  V L +   S     G  P  GV L GPSG GKTL  + +A +L      HV+RL  P + +   G+S                   +  L  A  EA A APSVL+ DELDA+  D   GG+  G         R    LL  LD     + V V+G T R                        A+  A R+PGRFDR + IG P +  RE IL +
Sbjct:  201 GLDAAVRRLRETVELPMRNPSLFRELGANPPTGVLLHGPSGAGKTLLSNAVANELDA----HVVRLRAPDVTSKYRGES-------------------EERLRDAFEEATAEAPSVLLLDELDAVAGDRARGGEANG---------RLIGQLLSLLDDLGEGDPVVVIGTTNRVD----------------------AIDPALRRPGRFDREIEIGVPDRDGREEILDV 375          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX27_ECTSI2.360e-30188.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F0YIH9_AURAN1.260e-934.92AAA domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A4D9CZ55_9STRA4.240e-932.65Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A0E9NLR3_SAICN1.540e-729.03Uncharacterized protein n=2 Tax=Saitoella complica... [more]
A0A832S9P0_9EURY2.010e-732.32CDC48 family AAA ATPase (Fragment) n=3 Tax=Methano... [more]
R9NY86_PSEHS2.090e-730.70Cell division cycle protein n=1 Tax=Pseudozyma hub... [more]
UPI00044498606.120e-728.44AAA family ATPase n=1 Tax=Stereum hirsutum (strain... [more]
A0A3N5W929_9PLAN9.950e-729.95AAA family ATPase (Fragment) n=1 Tax=Planctomyceta... [more]
A0A485KZT0_9STRA1.030e-628.70Aste57867_13866 protein n=1 Tax=Aphanomyces stella... [more]
A0A256IES1_9EURY1.030e-633.19AAA family ATPase n=5 Tax=Halorubrum TaxID=56688 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig20160contigEcto-sp13_S_contig20160:1469..3172 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score869.0
Seed ortholog evalue1.2e-249
Seed eggNOG ortholog2880.D7FX27
Model size1704
KEGG koko:K13525,ko:K14571,ko:K14575
KEGG TC3.A.16.1
KEGG Pathwayko03008,ko04141,ko05134,map03008,map04141,map05134
KEGG ModuleM00400,M00403
Hectar predicted targeting categoryother localisation
Exons1
EggNOG free text desc.preribosome binding
EggNOG OGsCOG0464@1,KOG0730@2759,KOG0733@2759
Cds size1704
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03009,ko03019,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463013.452723-CDS-Ecto-sp13_S_contig20160:1468..31721681463013.452723-CDS-Ecto-sp13_S_contig20160:1468..3172Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig20160 1469..3172 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig20160.6608.1prot_Ecto-sp13_S_contig20160.6608.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig20160 1469..3172 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig20160.6608.1

>prot_Ecto-sp13_S_contig20160.6608.1 ID=prot_Ecto-sp13_S_contig20160.6608.1|Name=mRNA_Ecto-sp13_S_contig20160.6608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=568bp
MLLLAFPGSEGSSCCLASGDWPLDPHEMLVHPQDLEHLRVPGFGYVEVNR
NNGSGDADSSRSKGGRGRRSAAQVEHSNAAAQEEEEEERPKPLAYCRAVP
DDSLAPGETRAPAWLLRAAGVQPRQHLSISRPSEVQEAEKLAVPLRGDDQ
QQDHLLRARVDLALKHRHGEEDASAGDCLSPADNGNFSQNVNSGGYFSKC
DSRAIARRVSGCMVREGSLLAAEVLGETVLLRVMAISCGNDDRGDASPVK
RPLIINSGTEIAMVRTQEQERSRSSPVSWDGQPVSPGEEPSRRRRRPQQQ
ATKGCAETWARQAPGLEAALSELRALVLLSVGGNSGGAWSGVLPAGVALC
GPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAGSGQSGGGGGGGGG
TRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGAT
APLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEG
EGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTAAGAAE
LELEPLATALQARPVAGS
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mRNA from alignment at Ecto-sp13_S_contig20160:1469..3172+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig20160.6608.1 ID=mRNA_Ecto-sp13_S_contig20160.6608.1|Name=mRNA_Ecto-sp13_S_contig20160.6608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1704bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20160:1469..3172+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGTTGCTTGCCTTCCCAGGCTCCGAGGGCTCCTCCTGCTGTCTTGC GAGCGGAGATTGGCCGCTGGACCCCCACGAGATGCTCGTGCACCCGCAAG ATCTGGAGCACCTACGGGTGCCGGGCTTCGGCTACGTTGAGGTCAACCGC AACAACGGCAGCGGCGACGCCGACAGCAGTAGGAGCAAAGGTGGGCGTGG CCGTCGTTCAGCAGCACAAGTAGAACACAGCAATGCTGCAGCACAGGAGG AGGAGGAGGAGGAACGCCCGAAGCCACTCGCCTATTGCAGAGCGGTTCCA GACGACTCTCTGGCTCCGGGCGAGACTCGAGCTCCCGCGTGGCTCCTGCG TGCCGCGGGAGTACAGCCCCGGCAGCACCTATCGATTTCTCGCCCCTCCG AGGTTCAAGAGGCTGAGAAGTTAGCGGTGCCCTTGCGAGGGGATGATCAA CAACAGGACCATCTGCTCCGTGCCCGTGTTGATCTGGCCCTCAAGCACCG ACATGGGGAAGAGGACGCCTCGGCAGGGGACTGCCTATCTCCTGCCGACA ACGGGAACTTTTCGCAAAACGTGAACAGCGGTGGTTATTTTAGCAAGTGC GACAGCCGCGCCATCGCGAGACGCGTTTCTGGGTGCATGGTGCGCGAAGG GTCGCTTCTGGCTGCCGAGGTTCTGGGCGAGACGGTCCTTCTGCGGGTCA TGGCCATCTCTTGCGGCAACGACGACCGCGGTGATGCATCCCCCGTCAAG CGGCCTTTGATAATCAACTCGGGCACCGAGATTGCGATGGTCAGAACACA AGAACAGGAGAGATCTCGGAGTTCACCCGTTTCGTGGGACGGGCAGCCGG TTTCACCCGGAGAAGAGCCAAGCCGCCGCCGCCGCCGGCCCCAACAGCAA GCTACCAAGGGCTGTGCGGAAACCTGGGCTCGGCAGGCACCAGGCTTGGA GGCTGCTCTGAGCGAGCTCCGTGCCCTTGTCCTCCTGTCTGTGGGCGGCA ACAGCGGCGGTGCCTGGTCAGGCGTCCTACCCGCGGGGGTCGCCCTCTGC GGCCCCTCCGGCGTCGGCAAGACCCTCTCGCTCGACCTCCTCGCCGAAGA CCTCAGCGAAAACCACGGCATCCACGTGATGCGCCTCCTCGGGCCTCAGA TCCTGGCCGGCTCTGGCCAAAGCGGAGGAGGAGGCGGCGGCGGCGGCGGG ACGAGAGCCTCGGCAGTGAGCACGCCGTTGCAAGGGCCGCTCGGCCTGGC CCTCTCCGAGGCCCGCGCCCGCGCTCCATCCGTCCTCGTCTTCGACGAAC TCGACGCCCTGTTTGATGCGTGCGGCGGCGGCGACGAGGGCGGAGCCACC GCCCCCCTGGGCGAGGGGGCGAGGGCGAACGCGGCGCTGCTCGAGGCGCT GGACCGCGCCTCCGCGATCGAAGGAGTGGCCGTGCTGGGCGCGACTCGCC GTTCACCGGGCGGGAAGGGGGGCGCCGGGTGGGCGGGGCTGGAAGAAGGC GAAGGCGGAGGAGGCGACGGTGCCGCCCTGCCCGCGGCGTTCCGGAAGCC CGGCCGATTCGATAGATGCGTGGCGATCGGACCCCCTACGCAAGCCCAGC GCGAAGGGATCCTTTCTATGGTTCTGTCGACAGCGGCGGGGGCGGCGGAG TTGGAGCTTGAGCCGCTTGCAACAGCCCTTCAGGCGCGGCCTGTGGCTGG AAGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20160:1469..3172+

>mRNA_Ecto-sp13_S_contig20160.6608.1 ID=mRNA_Ecto-sp13_S_contig20160.6608.1|Name=mRNA_Ecto-sp13_S_contig20160.6608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1704bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20160:1469..3172+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGTTGCTTGCCTTCCCAGGCTCCGAGGGCTCCTCCTGCTGTCTTGC
GAGCGGAGATTGGCCGCTGGACCCCCACGAGATGCTCGTGCACCCGCAAG
ATCTGGAGCACCTACGGGTGCCGGGCTTCGGCTACGTTGAGGTCAACCGC
AACAACGGCAGCGGCGACGCCGACAGCAGTAGGAGCAAAGGTGGGCGTGG
CCGTCGTTCAGCAGCACAAGTAGAACACAGCAATGCTGCAGCACAGGAGG
AGGAGGAGGAGGAACGCCCGAAGCCACTCGCCTATTGCAGAGCGGTTCCA
GACGACTCTCTGGCTCCGGGCGAGACTCGAGCTCCCGCGTGGCTCCTGCG
TGCCGCGGGAGTACAGCCCCGGCAGCACCTATCGATTTCTCGCCCCTCCG
AGGTTCAAGAGGCTGAGAAGTTAGCGGTGCCCTTGCGAGGGGATGATCAA
CAACAGGACCATCTGCTCCGTGCCCGTGTTGATCTGGCCCTCAAGCACCG
ACATGGGGAAGAGGACGCCTCGGCAGGGGACTGCCTATCTCCTGCCGACA
ACGGGAACTTTTCGCAAAACGTGAACAGCGGTGGTTATTTTAGCAAGTGC
GACAGCCGCGCCATCGCGAGACGCGTTTCTGGGTGCATGGTGCGCGAAGG
GTCGCTTCTGGCTGCCGAGGTTCTGGGCGAGACGGTCCTTCTGCGGGTCA
TGGCCATCTCTTGCGGCAACGACGACCGCGGTGATGCATCCCCCGTCAAG
CGGCCTTTGATAATCAACTCGGGCACCGAGATTGCGATGGTCAGAACACA
AGAACAGGAGAGATCTCGGAGTTCACCCGTTTCGTGGGACGGGCAGCCGG
TTTCACCCGGAGAAGAGCCAAGCCGCCGCCGCCGCCGGCCCCAACAGCAA
GCTACCAAGGGCTGTGCGGAAACCTGGGCTCGGCAGGCACCAGGCTTGGA
GGCTGCTCTGAGCGAGCTCCGTGCCCTTGTCCTCCTGTCTGTGGGCGGCA
ACAGCGGCGGTGCCTGGTCAGGCGTCCTACCCGCGGGGGTCGCCCTCTGC
GGCCCCTCCGGCGTCGGCAAGACCCTCTCGCTCGACCTCCTCGCCGAAGA
CCTCAGCGAAAACCACGGCATCCACGTGATGCGCCTCCTCGGGCCTCAGA
TCCTGGCCGGCTCTGGCCAAAGCGGAGGAGGAGGCGGCGGCGGCGGCGGG
ACGAGAGCCTCGGCAGTGAGCACGCCGTTGCAAGGGCCGCTCGGCCTGGC
CCTCTCCGAGGCCCGCGCCCGCGCTCCATCCGTCCTCGTCTTCGACGAAC
TCGACGCCCTGTTTGATGCGTGCGGCGGCGGCGACGAGGGCGGAGCCACC
GCCCCCCTGGGCGAGGGGGCGAGGGCGAACGCGGCGCTGCTCGAGGCGCT
GGACCGCGCCTCCGCGATCGAAGGAGTGGCCGTGCTGGGCGCGACTCGCC
GTTCACCGGGCGGGAAGGGGGGCGCCGGGTGGGCGGGGCTGGAAGAAGGC
GAAGGCGGAGGAGGCGACGGTGCCGCCCTGCCCGCGGCGTTCCGGAAGCC
CGGCCGATTCGATAGATGCGTGGCGATCGGACCCCCTACGCAAGCCCAGC
GCGAAGGGATCCTTTCTATGGTTCTGTCGACAGCGGCGGGGGCGGCGGAG
TTGGAGCTTGAGCCGCTTGCAACAGCCCTTCAGGCGCGGCCTGTGGCTGG
AAGT
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