mRNA_Ecto-sp13_S_contig20160.6608.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: D7FX27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX27_ECTSI) HSP 1 Score: 861 bits (2224), Expect = 2.360e-301 Identity = 505/573 (88.13%), Postives = 520/573 (90.75%), Query Frame = 1
Query: 1 MLLLAFPGSEGSSCCLASGDWPLDPHEMLVHPQDLEHLRVPGFGYVEVNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PLAYCRAVPDDSLAPGETRAPAWLLRAAGVQPRQHLSISRPSEVQEAEKLAVPLRGDDQQQDHLLRARVDLALKHRHGEEDASAGDCLSPADNGNFSQNVNSGGYFSKCDSRAIARRVSGCMVREGSLLAAEVLGETVLLRVMAISCGNDDRGDASPVKRPLIINSGTEIAMVRTQEQERSRSSPVSWDGQPVSPGEEPSRRRR---RPQQQATKGCAETWARQAPGLEAALSELRALVLLSVGGNSGGAWSGVLPAGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAGSGQSGXXXXXXXXTR-ASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTAAGAAELELEPLATALQARPVAGS 1704
MLLLAFP SEGSSCCL SGDWPLDPHE+LVHPQDLEHLRVPGFGYV VNR XXXXXXXXXXXXXXXXXXXXXXXXX PLAYCRAVPDDSLAPGETRAPAWLL AAGVQPRQHLSISRPSEVQEAE LAVPL GDDQQQ HL R RV LAL+HR GEEDASAG+ SPA NG SQNV SGGY SKCDSRAIARRVSGCMVR+GSLLAAEVLGETVL+RVM ISCGNDD GDASPVKRPLIINSGT++A+V QEQERSRSSPVSWDGQPVSPG E SRRRR RPQQQATKGC ETWARQAPGLEAALSELRALVLLSVGG+SGGAWSGVLPAGVALCGPSGVGKTLSLDLLAEDLSENHG+HV+RLLGPQILAGSGQ GXXXXXXXX ASA S+PLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGG TAPLGEGARANAALLEALDRASAI+GVAVLGATRRSPGGKGGAGW GLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLST AGAAELELEPL+TALQARP+AGS
Sbjct: 1 MLLLAFPSSEGSSCCLGSGDWPLDPHEILVHPQDLEHLRVPGFGYVAVNRNNGSGDADSSRSKGXXXXXXXXXXXXXXXXXXXXXXXXXRQKPLAYCRAVPDDSLAPGETRAPAWLLSAAGVQPRQHLSISRPSEVQEAENLAVPLGGDDQQQHHLPRVRVGLALEHRQGEEDASAGNRPSPAGNGIISQNVRSGGYVSKCDSRAIARRVSGCMVRDGSLLAAEVLGETVLMRVMGISCGNDDGGDASPVKRPLIINSGTKVALVGPQEQERSRSSPVSWDGQPVSPGGEQSRRRRPRRRPQQQATKGCTETWARQAPGLEAALSELRALVLLSVGGSSGGAWSGVLPAGVALCGPSGVGKTLSLDLLAEDLSENHGVHVIRLLGPQILAGSGQGGXXXXXXXXXXXASAASSPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGDTAPLGEGARANAALLEALDRASAIKGVAVLGATRRSPGGKGGAGWVGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTVAGAAELELEPLSTALQARPIAGS 573
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: F0YIH9_AURAN (AAA domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIH9_AURAN) HSP 1 Score: 69.3 bits (168), Expect = 1.260e-9 Identity = 88/252 (34.92%), Postives = 107/252 (42.46%), Query Frame = 1
Query: 943 GLEAALSELRALVLLSVGGNSGGAWSGVLPA-GVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAGSGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARAN--AALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTAAGAAELELEPLATALQAR 1689
GLEA L L +VLL + + A GV P GV GP G GKTL LA L+E + G +G RA L EARA+APS++ FDELD L A G G GG GE A+ + A LL +D S V V+GAT R AL A R+PGRFDR + P AQRE IL++ S+ A A+ PL AL R
Sbjct: 6 GLEAHLKSLEEMVLLPLKHPNLYASLGVAPPRGVLFHGPPGTGKTL----LARQLAEACSAELAHPGGVSFFVRNGADCLSKYVGEAERA----------LSTLFEEARAKAPSIIFFDELDGLAPARGSGRGGGG----GELAQHSVVATLLALMDGLSDRGDVVVIGATNRPD----------------------ALDPALRRPGRFDRELKFVAPDAAQREAILALHTSSWAPASRPR-PPLLKALAKR 216
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: A0A4D9CZ55_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ55_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.240e-9 Identity = 80/245 (32.65%), Postives = 100/245 (40.82%), Query Frame = 1
Query: 925 WARQAPGLEAALSELRALVLLSVGGNSGGAWSGVLPA-GVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQI---LAGSGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGA------RANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLS 1629
W GLEA + ELR V S+ G+ PA G L GPSG GKT L AE G HVMR+ GP++ L G +S L EARARAP+V+V DE++AL P E A R A LL LD ++ V VL AT R AL A R+PGR DR + +G P +A R IL ++L+
Sbjct: 265 WWASVGGLEAVVDELRQGVEQSLDSPHVFLDRGLRPARGFLLVGPSGTGKTTLLRAAAEYFGRGRGYHVMRVAGPEVVGRLVGETES---------------------RLRRVFREARARAPTVMVLDEVEALC-------------PRREAASPDLDRRMVATLLALLDGFQGLDRVVVLAATSRPQ----------------------ALDPALRRPGRLDRELEVGVPGEAARGEILRVLLA 453
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: A0A0E9NLR3_SAICN (Uncharacterized protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NLR3_SAICN) HSP 1 Score: 65.9 bits (159), Expect = 1.540e-7 Identity = 63/217 (29.03%), Postives = 93/217 (42.86%), Query Frame = 1
Query: 1030 PAGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAGS-GQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTAAGAAELELEPLATA 1677
P GV L GP G KTL+ LA + G++ M + GP+I G+S + + +ARA +PS++ FDE+DA+ + GG + G R AALL LD A+ V +L AT R + AA +PGR DR + + PP R+ IL + +S + A ++ +E LA A
Sbjct: 577 PKGVLLYGPPGCSKTLTAKALATEA----GLNFMAVKGPEIFNKYVGES-------------------ERAIREVFRKARAASPSIIFFDEIDAIASSRGGSE--------GSSDRVLAALLNELDGIEALVNVTILAATNRPD----------------------VIDAALMRPGRLDRIIYVAPPDLDARKQILQIQISKMSVAGDISIEELADA 740
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: A0A832S9P0_9EURY (CDC48 family AAA ATPase (Fragment) n=3 Tax=Methanoculleus sp. TaxID=90427 RepID=A0A832S9P0_9EURY) HSP 1 Score: 65.5 bits (158), Expect = 2.010e-7 Identity = 64/198 (32.32%), Postives = 87/198 (43.94%), Query Frame = 1
Query: 1030 PAGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAG-SGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSM 1620
P GV L GP G GKTL +A+ ++ G + + + GPQ+L+ G+S + + +AR APS++ FDELDAL A GGG E T + N L E +D + GV V+GAT R + A +PGRFDR V IG P + RE ILS+
Sbjct: 491 PKGVLLYGPPGTGKTL----IAKAVASESGANFVPIKGPQLLSKWVGES-------------------ERAVREVFKKARQVAPSIIFFDELDALTPARGGGTESHVTESV-----LNQILTE-IDGLEELRGVVVMGATNRPD----------------------MVDPALLRPGRFDRLVYIGEPGREDREKILSI 637
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: R9NY86_PSEHS (Cell division cycle protein n=1 Tax=Pseudozyma hubeiensis (strain SY62) TaxID=1305764 RepID=R9NY86_PSEHS) HSP 1 Score: 65.5 bits (158), Expect = 2.090e-7 Identity = 66/215 (30.70%), Postives = 91/215 (42.33%), Query Frame = 1
Query: 1030 PAGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAGSGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGIL-SMVLSTAAGAAELELEPLA 1671
P GV L GP G KTL +A L+ G++ + + GP++ S G T +ARA APS++ FDE+DAL + G G +R A LL +D A+ V V+GAT R L A +PGR DR V +GPP A R+ IL + + A GA +++LE LA
Sbjct: 629 PRGVLLYGPPGCSKTL----IARALATESGLNFLAVKGPELY--SKYVGESERAIRDT----------------FKKARAAAPSIIFFDEIDALSSSRDGDSSSGDAL----NSRIIATLLNEMDGIEAMSDVIVIGATNRPQ----------------------TLDPALLRPGRLDRLVYVGPPDHAARQQILRTRMAKMAVGADDVDLEKLA 795
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: UPI0004449860 (AAA family ATPase n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI0004449860) HSP 1 Score: 63.9 bits (154), Expect = 6.120e-7 Identity = 62/218 (28.44%), Postives = 91/218 (41.74%), Query Frame = 1
Query: 1030 PAGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQIL---AGSGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTAAGAAELELEPLAT 1674
P GV LCGP G KT+ LA + G++ + + GP++L G + +ARA APS++ FDE+DAL + G EGG+ EG + LL +D + GV V+GAT R + A +PGR DR + +GPP A R IL + + + +++ E LAT
Sbjct: 575 PKGVLLCGPPGCSKTV----LARATATESGVNFVAVRGPELLNKYVGESEKAVREI---------------------FRKARAAAPSIIFFDEIDALAISRSSGSEGGSH----EGVLTS--LLNEMDGVEELVGVTVVGATNRPE----------------------VIDPALMRPGRLDRILYVGPPDHAGRIEILKIRMRKMSVDPDVDFEELAT 739
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: A0A3N5W929_9PLAN (AAA family ATPase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3N5W929_9PLAN) HSP 1 Score: 61.2 bits (147), Expect = 9.950e-7 Identity = 59/197 (29.95%), Postives = 82/197 (41.62%), Query Frame = 1
Query: 1030 PAGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAGSGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSM 1620
P G+ L GP G GKTL +A + N + + GP++L S G T +AR +PS++ FDELDAL A GGGD+G + R +L LD +EGV V+GA+ R + A +PGRFDR V +G P++ R GI +
Sbjct: 17 PKGIVLYGPPGTGKTLLARAVAGESEANF----VNIRGPELL--SKWVGESEKAVRET----------------FRKARQVSPSIIFFDELDALAPARGGGDDGSRVSE-----RVVNQILTELDGLVELEGVVVIGASNRPD----------------------IIDPALLRPGRFDRLVYVGEPSKEGRLGIFKI 164
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: A0A485KZT0_9STRA (Aste57867_13866 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZT0_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.030e-6 Identity = 62/216 (28.70%), Postives = 95/216 (43.98%), Query Frame = 1
Query: 1030 PAGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAG-SGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTAAGAAELELEPLAT 1674
P G+ L GP G KTL+ A+ L+ G++ + + GP++ + G+S + + +ARA APSV+ FDE+DA+ + GGG G R + LL LD A++ V ++ AT R + AA +PGR DR + +GPP + R IL++ AA++ LE LAT
Sbjct: 527 PKGILLYGPPGCSKTLT----AKALATEGGMNFIAIKGPELFSKWVGES-------------------EKAIQSIFRKARAAAPSVIFFDEIDAVASSRGGGSSSGVAD------RVLSQLLNELDGIEALKQVILVAATNRPD----------------------LIDAALMRPGRIDRVLYVGPPDEPARAEILAIHTRKMPLAADVALEALAT 691
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Match: A0A256IES1_9EURY (AAA family ATPase n=5 Tax=Halorubrum TaxID=56688 RepID=A0A256IES1_9EURY) HSP 1 Score: 63.2 bits (152), Expect = 1.030e-6 Identity = 76/229 (33.19%), Postives = 97/229 (42.36%), Query Frame = 1
Query: 943 GLEAALSELRALVLLSVGGNSGGAWSGVLP-AGVALCGPSGVGKTLSLDLLAEDLSENHGIHVMRLLGPQILAG-SGQSGXXXXXXXXTRASAVSTPLQGPLGLALSEARARAPSVLVFDELDALF-DACGGGDEGGATAPLGEGARANAALLEALDRASAIEGVAVLGATRRSPGGKGGAGWAGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSM 1620
GL+AA+ LR V L + S G P GV L GPSG GKTL + +A +L HV+RL P + + G+S + L A EA A APSVL+ DELDA+ D GG+ G R LL LD + V V+G T R A+ A R+PGRFDR + IG P + RE IL +
Sbjct: 201 GLDAAVRRLRETVELPMRNPSLFRELGANPPTGVLLHGPSGAGKTLLSNAVANELDA----HVVRLRAPDVTSKYRGES-------------------EERLRDAFEEATAEAPSVLLLDELDAVAGDRARGGEANG---------RLIGQLLSLLDDLGEGDPVVVIGTTNRVD----------------------AIDPALRRPGRFDREIEIGVPDRDGREEILDV 375 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20160.6608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig20160.6608.1 >prot_Ecto-sp13_S_contig20160.6608.1 ID=prot_Ecto-sp13_S_contig20160.6608.1|Name=mRNA_Ecto-sp13_S_contig20160.6608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=568bp MLLLAFPGSEGSSCCLASGDWPLDPHEMLVHPQDLEHLRVPGFGYVEVNRback to top mRNA from alignment at Ecto-sp13_S_contig20160:1469..3172+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig20160.6608.1 ID=mRNA_Ecto-sp13_S_contig20160.6608.1|Name=mRNA_Ecto-sp13_S_contig20160.6608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1704bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20160:1469..3172+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20160:1469..3172+ >mRNA_Ecto-sp13_S_contig20160.6608.1 ID=mRNA_Ecto-sp13_S_contig20160.6608.1|Name=mRNA_Ecto-sp13_S_contig20160.6608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1704bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20160:1469..3172+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |