mRNA_Ecto-sp13_S_contig201.6570.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig201.6570.1 vs. uniprot
Match: A0A6H5JNV2_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV2_9PHAE) HSP 1 Score: 1041 bits (2692), Expect = 0.000e+0 Identity = 549/628 (87.42%), Postives = 565/628 (89.97%), Query Frame = 1
Query: 19 MATQRTIRVVRWRDVGSEGVMSHMAPKMAENHPLLLCGYWAHQVLNKDAAQRWSTFTGIKLVLAARGLDQLRVDISCTKKGDSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSREEGKPEVLSAIAGEFRTPSCVAEEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTADVHAMPVFSESANHSGLQPAETAAVVDGEEAARKGAVYADVAEGEAIFIPEGWWHQVLSSRGTVAVNVWFKGARPALCEGPSEHMRKYYLRCLVESLLADRLREATAGNEDRRAIMAAADIEVATVTGDHALKPAADTPGAAAVEREWSPLCSPTSTVEERNLYLRTIGTDRMKEELPRVAHEHPQDWARLVTGLDPLTAYVVTTQWEAAGGAVGMPEFYAAIFGTGEEMAATGSGEEDGRNRAERATAAATAGVTETSGTVQLAGSEGIGRTQQRASGAACDGAFVGAGGMGGFXXXXXXXXXXXXXXXXXXXXEAAGSVALLPGHVGAGKAAXXXXXX--TMNTAVWGGDGARCEASQQAXXXXXXXXXXXXXXXXQDAGAGAAAFASKEVTGVALQERLVRLREEFVREQCGVVLNRALGW 1896
MATQRTIRVVRWRDVGSEGVMS+MAPKMAENHPLL+CGYWAHQVLNKDAAQRWSTF GIK VLA RGLDQLRVDISCTKKG+SFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPV+SREEGKPEVLSAIAGEFRTPSCVAEEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTADV AMPVFSESANHSGLQPAETA +V G+EAARKGAVYADVAEGEAIFIPEGWWHQV SSRGTVAVNVWFKGARPALCEGPS HMR Y+LRCLVESLLADRLREATAG+EDRRAIMAAADIEVATVTGDH KPAADT AAAVEREWSPLC PTSTVEERNLYLRT+GTDRMKEELPRVAHE PQDWARLV+GLDPLTAYVVTTQWEAAGGAVGMPEFYAAIFGTGEEMAATG GEED RNRAE ATAAATAG TET GTVQLAGSEGIGRTQQ A+GAACDGA VGAGG+G F EAAGSVALLPGHVGAG+AA TMNTAVWGGDGARCEAS QA XXXXXXXX QD GAGAA FAS+EV+GVALQERLVRLRE FVREQCGVVLNRA+GW
Sbjct: 1 MATQRTIRVVRWRDVGSEGVMSYMAPKMAENHPLLMCGYWAHQVLNKDAAQRWSTFAGIKSVLATRGLDQLRVDISCTKKGNSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVISREEGKPEVLSAIAGEFRTPSCVAEEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTADVDAMPVFSESANHSGLQPAETAILVHGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSGHMRNYHLRCLVESLLADRLREATAGDEDRRAIMAAADIEVATVTGDHVPKPAADTSAAAAVEREWSPLCGPTSTVEERNLYLRTMGTDRMKEELPRVAHERPQDWARLVSGLDPLTAYVVTTQWEAAGGAVGMPEFYAAIFGTGEEMAATGGGEEDARNRAEGATAAATAGATETGGTVQLAGSEGIGRTQQPATGAACDGAVVGAGGVGRFRVDGGGAGQASYGSGVASGGEAAGSVALLPGHVGAGEAAAAAAAAITTMNTAVWGGDGARCEASLQAQQQQLXXXXXXXXVSQQDVGAGAAGFASQEVSGVALQERLVRLREAFVREQCGVVLNRAVGW 628
BLAST of mRNA_Ecto-sp13_S_contig201.6570.1 vs. uniprot
Match: D8LLE0_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE0_ECTSI) HSP 1 Score: 714 bits (1844), Expect = 1.240e-254 Identity = 358/379 (94.46%), Postives = 369/379 (97.36%), Query Frame = 1
Query: 19 MATQRTIRVVRWRDVGSEGVMSHMAPKMAENHPLLLCGYWAHQVLNKDAAQRWSTFTGIKLVLAARGLDQLRVDISCTKKGDSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSREEGKPEVLSAIAGEFRTPSCVAEEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTADVHAMPVFSESANHSGLQPAETAAVVDGEEAARKGAVYADVAEGEAIFIPEGWWHQVLSSRGTVAVNVWFKGARPALCEGPSEHMRKYYLRCLVESLLADRLREATAGNEDRRAIMAAADIEVATVTGDHALKPAADTPGAAAVEREWSPLCSPTSTVEERNLYLRTIGTDRMKE 1155
MATQ+TIRVVRWRDVGSEGVMS+MAPKMA+NHPLL+ G+WAHQVLNKDAAQRWSTFTGIK VLAARGLDQLRVDISCTKKGDSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSREEGKPEVLSAIAGEFRTPSCV++EDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTA VHAMPVFSESANHSGLQPAETAAVVDG+EAARKGAVYADVAEGEAIFIPEGWWHQV SSRGTVAVNVWFKGARPALCEGPS+HMR YYLRCL+ESLLADRLREATAG+EDRRAIMAAADIEVATVTGDHA KPAADT AAAVEREWSPL SPTSTVEERNLYLRTIGTD MKE
Sbjct: 1 MATQQTIRVVRWRDVGSEGVMSYMAPKMAQNHPLLMSGHWAHQVLNKDAAQRWSTFTGIKSVLAARGLDQLRVDISCTKKGDSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSREEGKPEVLSAIAGEFRTPSCVSKEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTAGVHAMPVFSESANHSGLQPAETAAVVDGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSKHMRNYYLRCLIESLLADRLREATAGDEDRRAIMAAADIEVATVTGDHAPKPAADTSAAAAVEREWSPLRSPTSTVEERNLYLRTIGTDSMKE 379
BLAST of mRNA_Ecto-sp13_S_contig201.6570.1 vs. uniprot
Match: A0A067C9Y8_SAPPC (JmjC domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C9Y8_SAPPC) HSP 1 Score: 182 bits (462), Expect = 1.090e-47 Identity = 107/248 (43.15%), Postives = 139/248 (56.05%), Query Frame = 1
Query: 235 VDISCTKKG-DSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSREEGKPEVLSAIAGEFRTPSCVAEEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTADVHAMPVFSESANHSGLQPAETAAVVDGEEAARKGAVYADVAEGEAIFIPEGWWHQVLSSRGTVAVNVWFKGARPALCEGPSEHMRKYYLRCLVESLLADRLREATAGNEDRRAI 975
VD++C D++ GD RQ V LK D V EA+ GQ HW E L +YL QCP+ S P VL +A F P +AE L Q+NLWM + T LHYDA N+L V++G+K V L P T+DV A PV S+SANH+ L +D +A A + V +A+FIPEGWWHQV S T+AVN WF G RPAL + P HM+ YY R L+E +LA ++A DR+ +
Sbjct: 32 VDVACAPVAEDAYSGDVCLRQSVELKFGDFVAYYEAKRRGQSHWLMDTEDELQFYLAQCPLQSTTPATPAVLPHLASTFPPPKAIAEMALTQVNLWMTLQASRTTLHYDAYDNVLTVVRGAKHVKLFAP--TSDVGAHPVTSKSANHARL-------TLDELDARAPDATFT-VTPTDALFIPEGWWHQVSSDPFTIAVNYWFDGLRPALVQHP--HMQPYYARVLLEDMLAHARKQALQAYLDRQQV 267
BLAST of mRNA_Ecto-sp13_S_contig201.6570.1 vs. uniprot
Match: K3W726_GLOUD (JmjC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W726_GLOUD) HSP 1 Score: 179 bits (455), Expect = 2.000e-46 Identity = 132/355 (37.18%), Postives = 171/355 (48.17%), Query Frame = 1
Query: 226 QLRVDISCTKKGDSF-RGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPV-VSREEG--KPEVLSAIAGEFRTPSCVAE--EDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTADVHAMPVFSESANHSGLQPAETAAVVDGEEAARKGAVYADVAEGEAIFIPEGWWHQVLSSRGTVAVNVWFKGARPALCEGPSEHMRKYYLRCLVESLLADRLREATAGNEDRRAIMAAADIEVATVTGDHALKPAADTPGAAAVEREWSPLCSPTSTVEERNLYLRTIGTDRMKEELPRVAHEHPQDWARLVTGLDPLTAYVVTTQWEAAGGAV 1272
Q VDI+C +F G++ SRQ V LK D V EA GQ HW D L++YLCQCP+ V R + VL I EF P VA E L Q+NLW+ + T+LHYDA N+L VL G K V L PP T +++A PV ++S NHS + A+ V + V G+A+ IPEGWWHQV S T+AVN WF G R L + P M YY R L+E L+ RE A + RR M E+ GD +ER C + E + L T+G ++ R+A EHP +W L+ V+TT WEA AV
Sbjct: 42 QTVVDIACKAPSSTFYSGEERSRQNVELKFGDFVLFYEASHAGQRHWLQ-DVDDLEFYLCQCPIAVYRPDATCSQPVLPKIMDEFMLPESVASYSESLSQVNLWIAVHSSRTSLHYDAYRNILVVLYGRKVVTLYPPSETRNLYAYPVHTKSTNHSQVNVAQPDLVKHPRFVNATSQRFI-VNAGDALVIPEGWWHQVDSDAYTIAVNFWFDGVRQQLAQAPD--MTPYYSRVLLEDLMK---RETDAYLQQRRQRMIQQ--ELGQERGDF-------------MERILR--CQSQAEKENMLIALDTLGPSEFRDAQVRLASEHPSEWRFLLENASEDFVAVLTTSWEAEEEAV 372
BLAST of mRNA_Ecto-sp13_S_contig201.6570.1 vs. uniprot
Match: A0A1V9ZL82_9STRA (JmjC domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZL82_9STRA) HSP 1 Score: 172 bits (436), Expect = 6.130e-44 Identity = 100/231 (43.29%), Postives = 130/231 (56.28%), Query Frame = 1
Query: 235 VDISCTKKGDS-FRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSREEGKPEVLSAIAGEFRTPSCVAEEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTADVHAMPVFSESANHSGLQPAETAAVVDGEEAARKGAVYADVAEGEAIFIPEGWWHQVLSSRGTVAVNVWFKGARPALCEGPSEHMRKYYLRCLVESLL 924
VD++C ++ + GD RQ V LK D V A+ G HW E L +YL QCP++S + P VL +A F P+ +A+ + Q+NLWM + T LHYDA N+L V++G+K V L P T+ V A PV+S+SANHS LQ A+ A R+ V A+FIPEGWWHQV S T+AVN WF G RPAL P HM+ YY R LVE L+
Sbjct: 40 VDVACAPPSEAAYSGDVRLRQSVELKFGDFVAYYSAKCSGGTHWLMETEDELQFYLAQCPLLSTQPSTPAVLPGLAPLFPPPAAIAKVPMTQVNLWMTLAASATTLHYDAYDNILRVVRGTKYVRLFTP--TSAVAAHPVYSKSANHSLLQMADIEA--------REPTYSFTVTPNNALFIPEGWWHQVSSEPFTIAVNYWFDGLRPALVMHP--HMQPYYARVLVEDLI 258
BLAST of mRNA_Ecto-sp13_S_contig201.6570.1 vs. uniprot
Match: T0QUU3_SAPDV (JmjC domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QUU3_SAPDV) HSP 1 Score: 171 bits (433), Expect = 1.680e-43 Identity = 111/279 (39.78%), Postives = 140/279 (50.18%), Query Frame = 1
Query: 103 AENHPLLLCGYW-AHQVLNKDAAQRWSTFTGIKLVLAARGL---DQLRVDISCTKKG-DSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSREEGKPEVLSAIAGEFRTPSCVAEEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTADVHAMPVFSESANHSGLQPAETAAVVDGEEAARKGAVYADVAEGEAIFIPEGWWHQVLSSRGTVAVNVWFKGARPALCEGPSEHMRKYYLRCLVESLL 924
A+ P LL W AH D A +LA+ G + VD++C D++ GD RQ V LK D V EA+ GQ HW E L +YL QCP+ S P VL + F P +A L Q+NLWM + T LHYDA N+L V++G+K V L P D H PV S+SANH+ L E +A A + V A+FIPEGWWHQV S T+AVN WF G RPAL + P HM+ YY R L+E +L
Sbjct: 3 ADRRPCLLPMAWHAHAAQGDDDATT--------ALLASAGFVAHHETVVDVACAPVAEDAYSGDVRLRQSVELKFGDFVAYYEAKRRGQAHWLMDTEDELQFYLAQCPLHSTAPATPAVLPHLVSTFPPPKAIAGMALTQVNLWMTLQASRTTLHYDAYDNVLTVVRGAKHVKLFAPTTNVDAH--PVTSKSANHAQLTLYEL-------DARAPDATFT-VTPTNALFIPEGWWHQVSSDPFTIAVNYWFDGLRPALVQHP--HMQPYYARVLMEDML 261
BLAST of mRNA_Ecto-sp13_S_contig201.6570.1 vs. uniprot
Match: A0A6G0XBD0_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBD0_9STRA) HSP 1 Score: 166 bits (419), Expect = 2.110e-41 Identity = 101/241 (41.91%), Postives = 134/241 (55.60%), Query Frame = 1
Query: 235 VDISCTKKGD-SFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSREEGKPEVLSAIAGEFRT-PSCVAEEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTADVHAMPVFSESANHSGLQPAETAAV---VDGEEAARKG------AVYADVAEGEAIFIPEGWWHQVLSSRGTVAVNVWFKGARPALCEGPSEHMRKYYLRCLVESLL 924
VDI+C + D +F GD RQ V LK D VE +A+ G+ HW E L +YL QCP+ S P VL + P C+ +L Q+NLWM + T+LHYDA N+L VL G+K V L PP A + PV+S+SANH+ L A++ A+ VD AA + A Y ++ EA++IPEGWWHQV S T+AVN WF G R L G + M+ YY R L+E L+
Sbjct: 41 VDIACAPRSDDAFSGDVRRRQSVELKFGDYVEYFQAKMAGKTHWLMDTEDELKFYLAQCPLYSTSAETPAVLPHLLTHLPPKPPCLDAIELTQVNLWMAVAPSETSLHYDAYENILHVLHGAKHVRLYPPSAVAAIEPHPVYSKSANHTTLSLADSKALPGFVDFTVAANRSEFVAGTAFYDLLSIVEALYIPEGWWHQVRSEAFTIAVNYWFNGMRAQLL-GDGD-MQPYYARVLLEDLI 279
BLAST of mRNA_Ecto-sp13_S_contig201.6570.1 vs. uniprot
Match: A0A8K1CCW9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCW9_PYTOL) HSP 1 Score: 165 bits (417), Expect = 2.420e-41 Identity = 119/392 (30.36%), Postives = 185/392 (47.19%), Query Frame = 1
Query: 100 MAENHPLLLCGYWAHQVLNKDAAQRWSTFTGIKLVLAARGLDQLRVDISCT-KKGDSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSREEGKPEVLSAIAG------EFRTPSCVAEEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTADVHAMPVFSESANHSGLQPAETAAVVDGEEAARKGAVYADVAEGEAIFIPEGWWHQVLSSRGTVAVNVWFKGARPALCEGPSEHMRKYYLRCLVESLLADRLREATAGNEDRRAIMAAADIEVATVTGDHALKPAADTPGAAAVEREWSPLCSPTSTVEERNLYLRTIGTDRMKEELPRVAHEHPQDWARLVTGLDPLTAYVVTTQWE 1254
+A P L G+ A + ++ D I + A + VD++C K G + GD +RQ V +K D ++ +A G+PHW S E L++YLCQCP+ KP+ S++A F+ P+ +A +L Q NLW+ + T++HYDA N+L VL G+K V L PP T ++++ P+FS+S+NHS + A A V+ + G+A++IPEGWWHQV +S +A+N WF G R L + P HM YY R +E L+ RL + + + AA T +A R + P S E + L ++ ++K+ +A HP DW L+ A + W+
Sbjct: 2 IASTEPTFLKGF-ARECVHNDQDLALFEPGSIHTLAAFQSHRDTVVDVACKDKSGRFYSGDHRARQSVEVKFGDFLDYYQATNKGEPHWLGSVE-DLEFYLCQCPIAVF---KPDDTSSVATLPNIMQMFKVPNALAGANLTQTNLWIAVNSSRTSVHYDAYRNVLVVLHGTKTVTLYPPSDTGNLYSRPIFSKSSNHSEVNFAHPDLSQHPAFANAHPQVF-KLEAGDALYIPEGWWHQVDTSAYCIAINYWFDGLRAELVQDP--HMTTYYARVAMEELV--RLESSRILRQFH--------------------EQAAHTVNSATPSR----IVQPQSQTEHERM-LMSLSEQQLKDAQVTLASSHPDDWRALLENASVDFAAYLADHWD 358
BLAST of mRNA_Ecto-sp13_S_contig201.6570.1 vs. uniprot
Match: W4GXF1_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXF1_9STRA) HSP 1 Score: 159 bits (401), Expect = 3.650e-40 Identity = 94/233 (40.34%), Postives = 126/233 (54.08%), Query Frame = 1
Query: 235 VDISCTKKG-DSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSREEGKPEVLSAIAGEFRT--PSCVAEEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTADVHAMPVFSESANHSGLQPAETAAVVDGEEAARKGAVYADVAEGEAIFIPEGWWHQVLSSRGTVAVNVWFKGARPALCEGPSEHMRKYYLRCLVESLL 924
VD++CT+ D + GD RQ V LK D V +A+ G HW E L +YL QCP++S P VL + + P + L QINLWM + T++HYDA N+L VL+G+K V L PP T + A ++S+S+NH+ L A+T A+ + DV A++IPEGWWHQV S TVA+N WF G RP L P+ M YY R LVE L+
Sbjct: 42 VDVACTQPSEDVYSGDVRLRQSVELKFGDFVAYFQAKAAGTSHWLMDTENDLHFYLAQCPLLSTSTDVPAVLPHLLPAMASLRPPILDNIQLTQINLWMTIASSDTSVHYDAYENVLHVLQGTKCVRLYPPSATPVIQAHAIYSKSSNHTTLSLAQTKALPH--------FIEFDVHANMALYIPEGWWHQVRSEPLTVAMNYWFDGMRPTLVAQPA--MVPYYARVLVEDLV 264
BLAST of mRNA_Ecto-sp13_S_contig201.6570.1 vs. uniprot
Match: A0A024U5K3_9STRA (JmjC domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U5K3_9STRA) HSP 1 Score: 156 bits (394), Expect = 4.120e-39 Identity = 95/238 (39.92%), Postives = 129/238 (54.20%), Query Frame = 1
Query: 235 VDISCTKKG-DSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSREEGKPEVLSAIAGEFRTPSCVAEE-------DLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTADVHAMPVFSESANHSGLQPAETAAVVDGEEAARKGAVYADVAEGEAIFIPEGWWHQVLSSRGTVAVNVWFKGARPALCEGPSEHMRKYYLRCLVESLL 924
VD++CT+ D++ GD RQ V LK D V +A++ G HW E L +YL QCP+ S P VL + P C A + D+ QINLWM + T++HYDA N+L V++GSKRV L PP T + ++S+S+NH+ L E+ A+ D V +V A++IPEGWWHQV S+ TVAVN WF G R L P+ M YY R +VE L+
Sbjct: 42 VDVACTQPSVDAYSGDVRLRQSVELKFGDFVAYYQAKQGGSFHWLMEAESDLQFYLAQCPLYSTSADVPAVLPNLL-----PCCAALKPPVLDTVDVTQINLWMTVAPSDTSVHYDAYENILHVVEGSKRVRLYPPSATPAIQPHAIYSKSSNHTILTLEESKALPD--------FVEFNVDANTALYIPEGWWHQVHSASFTVAVNYWFDGMRSRLLAQPT--MVPYYARVVVEDLV 264 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig201.6570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig201.6570.1 >prot_Ecto-sp13_S_contig201.6570.1 ID=prot_Ecto-sp13_S_contig201.6570.1|Name=mRNA_Ecto-sp13_S_contig201.6570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=627bp MATQRTIRVVRWRDVGSEGVMSHMAPKMAENHPLLLCGYWAHQVLNKDAAback to top mRNA from alignment at Ecto-sp13_S_contig201:15550..21832- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig201.6570.1 ID=mRNA_Ecto-sp13_S_contig201.6570.1|Name=mRNA_Ecto-sp13_S_contig201.6570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6283bp|location=Sequence derived from alignment at Ecto-sp13_S_contig201:15550..21832- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig201:15550..21832- >mRNA_Ecto-sp13_S_contig201.6570.1 ID=mRNA_Ecto-sp13_S_contig201.6570.1|Name=mRNA_Ecto-sp13_S_contig201.6570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1881bp|location=Sequence derived from alignment at Ecto-sp13_S_contig201:15550..21832- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |