mRNA_Ecto-sp13_S_contig20011.6528.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig20011.6528.1
Unique NamemRNA_Ecto-sp13_S_contig20011.6528.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig20011.6528.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE)

HSP 1 Score: 800 bits (2066), Expect = 9.210e-291
Identity = 386/394 (97.97%), Postives = 391/394 (99.24%), Query Frame = 1
Query:    1 MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIEPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRFTPAFDAQFKNKKMYLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRELEGKAAEYNFEVPAQGSLSNANRKNGVSKEEIASVTRTYFKKNFPQELEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 1182
            MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVY+DESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKI+PGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHR TPAFDAQFKNKKM+LVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRE EGKAAEYNFEVPAQGSL NANRKNGVSKEEIASVTRTYFKKNFPQ+LEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRN+LDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP
Sbjct:   91 MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYIDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNILDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 484          
BLAST of mRNA_Ecto-sp13_S_contig20011.6528.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE)

HSP 1 Score: 781 bits (2017), Expect = 2.300e-281
Identity = 380/396 (95.96%), Postives = 388/396 (97.98%), Query Frame = 1
Query:    1 MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIEPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRFTPAFDAQFKNKKMYLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRELEGKAAEYNFEVPAQGSLSNANRKNGVSKEEIASVTRTYFKKNFPQELEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHY--VSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 1182
            MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAG+AVIVYMDESFVHQAHGSAYSYFPSDD G+VQDGIGRTTGKGLRMIMVHAIT+HGPLAELQEGFPIREGWFKAKENRAKKI+PGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHR TPAFDAQFKNKKM+LVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRE EGKAAEYNFEVPAQGSL NANR NGVSKEEIASVTRTYFKKNFPQ+LEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHY  VSIHFEKGRN+LDVWK+IRLGWYGDPEWDGQE GWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP
Sbjct:  212 MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAELQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANR-NGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYHYVSIHFEKGRNVLDVWKKIRLGWYGDPEWDGQERGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 606          
BLAST of mRNA_Ecto-sp13_S_contig20011.6528.1 vs. uniprot
Match: A0A6H5KP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP14_9PHAE)

HSP 1 Score: 758 bits (1956), Expect = 3.470e-274
Identity = 367/374 (98.13%), Postives = 370/374 (98.93%), Query Frame = 1
Query:    1 MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIEPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRFTPAFDAQFKNKKMYLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRELEGKAAEYNFEVPAQGSLSNANRKNGVSKEEIASVTRTYFKKNFPQELEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMD 1122
            MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAK AEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKI+PGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHR TPAFDAQFKNKKM+LVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRE EGKAAEYNFEVPAQGSL NANRKNGVSKEEIASVTRTYFKKNFPQ+LEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMD
Sbjct:  135 MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKGAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMD 508          
BLAST of mRNA_Ecto-sp13_S_contig20011.6528.1 vs. uniprot
Match: A0A6H5KL68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL68_9PHAE)

HSP 1 Score: 733 bits (1893), Expect = 1.700e-264
Identity = 359/394 (91.12%), Postives = 368/394 (93.40%), Query Frame = 1
Query:    1 MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIEPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRFTPAFDAQFKNKKMYLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRELEGKAAEYNFEVPAQGSLSNANRKNGVSKEEIASVTRTYFKKNFPQELEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 1182
            MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAG                   YSYFPSDDTGVVQDGIGRTTGKG+RM+MVHAITKHGPLAELQ GFPIREGWFKAKENRAKKI+PGEADFEMSDEQTAEFLWQAKLATG Y+NAMTDGMFMQWLKHR TPAFDAQFKNKKM+LVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRE EGKAAEYNFEVPAQGSL NANRKNGVSKEEIASVTRTYFKKNFPQ+LEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQ GKHYVSIHFE+GRN+LDVWKQIRLGWYGD EWDGQEGGWKAA+CGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP
Sbjct:  105 MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAG-------------------YSYFPSDDTGVVQDGIGRTTGKGVRMVMVHAITKHGPLAELQGGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGYYNNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQQGKHYVSIHFERGRNILDVWKQIRLGWYGDSEWDGQEGGWKAASCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 479          
BLAST of mRNA_Ecto-sp13_S_contig20011.6528.1 vs. uniprot
Match: A0A6H5LE74_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE74_9PHAE)

HSP 1 Score: 723 bits (1866), Expect = 6.500e-261
Identity = 345/355 (97.18%), Postives = 349/355 (98.31%), Query Frame = 1
Query:  118 VKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIEPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRFTPAFDAQFKNKKMYLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRELEGKAAEYNFEVPAQGSLSNANRKNGVSKEEIASVTRTYFKKNFPQELEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 1182
            VKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGR TGKGLRMIMVHAITKHGPLAELQEG PIREGWFKAKENRAKKI+PGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHR TPAFDAQFKNKKM+LVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRE EGKAAEYNFEVPAQGSL NANRKNGVSKEEIASVTRTYFKKNFPQ+LEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAA+CGKLVQH IGKMDEWIGLYGGNLSGTIGSLEYP
Sbjct:   92 VKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRITGKGLRMIMVHAITKHGPLAELQEGLPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAADCGKLVQHTIGKMDEWIGLYGGNLSGTIGSLEYP 446          
BLAST of mRNA_Ecto-sp13_S_contig20011.6528.1 vs. uniprot
Match: A0A6H5KF48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF48_9PHAE)

HSP 1 Score: 611 bits (1576), Expect = 4.680e-214
Identity = 302/336 (89.88%), Postives = 312/336 (92.86%), Query Frame = 1
Query:    1 MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIEPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRFTPAFDAQFKNKKMYLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRELEGKAAEYNFEVPAQGSLSNANRKNGVSKEEIASVTRTYFKKNFPQELEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDV 1008
            MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDD GVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKEN                EQTA+FLWQAKLATG+YH+AMTDG FMQWLKHR TPAFDAQFKNKKM+LVLDNASYHHCFDEE+KVPETNSKKYNVELLRKYG T+F+VTRE EG AAEYNFEVPA+GSL NANRKNGVSKEEIASVTRTYFKKNFPQ+LEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNML+ 
Sbjct:   91 MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDKGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENH---------------EQTAKFLWQAKLATGEYHDAMTDGTFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEELKVPETNSKKYNVELLRKYGYTAFEVTRESEGMAAEYNFEVPAEGSLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLEA 411          
BLAST of mRNA_Ecto-sp13_S_contig20011.6528.1 vs. uniprot
Match: A0A6H5J7U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7U0_9PHAE)

HSP 1 Score: 588 bits (1517), Expect = 3.660e-207
Identity = 310/410 (75.61%), Postives = 338/410 (82.44%), Query Frame = 1
Query:    1 MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYS-YFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIEPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRFTPAFDAQFKNKKMYLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRELEGKAAEYNFEVPAQGSLSNANRKNGVSKEEIASVTRTYFKKNFPQELEEKAETYMREKGWG--------LIWTPPYMP-TFQPIELFWQHGKHYV-------SIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEY 1179
            MSNRAVGGLLQ L  KRR G IKIPPLNEERKNRIRLFLV+M+LAKR EDAGVAVIV +DESFVH AHGSAYS YFPSDD GVVQDGIGRTTGKGLR+ MV AIT H P AEL+EGFPIREGWFKAKENRAKK++P EADFE SDEQTAE LWQAKLATG++HNAM DGMFMQWLKHR T AFDAQFKN KM+LVLD+ASYHH FDEE+KVP+TNSKKYNVELLRKYGC SFKVTRE +GKAAE NFEVP QG LSNANRKN VSK EIASVTRTYF+KNFPQ+LEEKAETYMREKG G        ++      P T  P +   +H    +       S    +GR+MLD+ KQIRLGWYG+PEWDGQEGGWKAANCGKL +HAI KM++WIGLYGGNLSGTI  LEY
Sbjct:   81 MSNRAVGGLLQCLVLKRRTGGIKIPPLNEERKNRIRLFLVEMNLAKRVEDAGVAVIVSIDESFVHHAHGSAYSCYFPSDDKGVVQDGIGRTTGKGLRIFMVDAITVHRPSAELKEGFPIREGWFKAKENRAKKMKPAEADFETSDEQTAELLWQAKLATGNHHNAMMDGMFMQWLKHRLTLAFDAQFKNNKMFLVLDSASYHHYFDEELKVPKTNSKKYNVELLRKYGCRSFKVTRESKGKAAEDNFEVPVQGLLSNANRKNSVSKVEIASVTRTYFRKNFPQQLEEKAETYMREKGLGGGAGGVLIVVHAVVMRPLTSHPCKAGTEHAGFSLDQALTSPSAKRREGRDMLDISKQIRLGWYGEPEWDGQEGGWKAANCGKL-EHAIYKMNKWIGLYGGNLSGTIDGLEY 489          
BLAST of mRNA_Ecto-sp13_S_contig20011.6528.1 vs. uniprot
Match: A0A6H5JG34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG34_9PHAE)

HSP 1 Score: 554 bits (1428), Expect = 1.230e-191
Identity = 276/348 (79.31%), Postives = 292/348 (83.91%), Query Frame = 1
Query:  139 RAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIEPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRFTPAFDAQFKNKKMYLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRELEGKAAEYNFEVPAQGSLSNANRKNGVSKEEIASVTRTYFKKNFPQELEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 1182
            RAEDAGVAVIVYMDESFVHQAHGSAYS FPSDD GVVQDGIGRTTGKGLRMIMVHAIT+HG LAELQEGFPIREGWFKAKENRAKKI+PGEADFEMSDEQTAEFLWQAKLA GD+ +AMTDGMFMQWLKHR TPAFDAQFKNKKM+LVLD+            +P T +      L R   C                       GSL NANRKNGVSKEEIASVTRTYFKKNFP++LEEKAETYMRE+GW LIWTPPYMPTFQPIELFWQHGKHYVSIHFE+GRNMLDVWKQIRLGWYGDPEWDGQE GWKAANCGKLV+HAIGKM++WIGLYGG+LSGTIGSLEYP
Sbjct:  313 RAEDAGVAVIVYMDESFVHQAHGSAYSCFPSDDKGVVQDGIGRTTGKGLRMIMVHAITEHGTLAELQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLAPGDFQSAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDSL-----------MPHTTTA-----LTRNSRCPK-------------------PTGSLPNANRKNGVSKEEIASVTRTYFKKNFPKKLEEKAETYMREQGWRLIWTPPYMPTFQPIELFWQHGKHYVSIHFERGRNMLDVWKQIRLGWYGDPEWDGQERGWKAANCGKLVEHAIGKMNKWIGLYGGSLSGTIGSLEYP 625          
BLAST of mRNA_Ecto-sp13_S_contig20011.6528.1 vs. uniprot
Match: A0A6H5L7T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T4_9PHAE)

HSP 1 Score: 541 bits (1393), Expect = 9.550e-190
Identity = 279/374 (74.60%), Postives = 288/374 (77.01%), Query Frame = 1
Query:   61 RIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIEPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRFTPAFDAQFKNKKMYLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRELEGKAAEYNFEVPAQGSLSNANRKNGVSKEEIASVTRTYFKKNFPQELEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 1182
            RIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPS+D GVVQD IGRTTGKG+RMIMVHAITKHGPLAELQEGFPIRE                       DEQTA FLWQAKLATGDYHN M DGMFMQWLKHR TPAFDAQ                              KKYNVELLRKYGCT  KVTRE EGKAAEYNFEVPAQGSL  ANRKNGVSKEEI                 + AETYMREKG GLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGR MLDVW++IRLGWYG+PEWDGQEGGWK ANCGKLV+HAIGK +EWIGLYGG+LSGTIGSLEYP
Sbjct:   92 RIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSNDKGVVQDEIGRTTGKGVRMIMVHAITKHGPLAELQEGFPIRE-----------------------DEQTAGFLWQAKLATGDYHNTMMDGMFMQWLKHRLTPAFDAQ------------------------------KKYNVELLRKYGCTLSKVTRESEGKAAEYNFEVPAQGSLPKANRKNGVSKEEI-----------------DFAETYMREKGLGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRTMLDVWRRIRLGWYGNPEWDGQEGGWKTANCGKLVEHAIGKKNEWIGLYGGSLSGTIGSLEYP 395          
BLAST of mRNA_Ecto-sp13_S_contig20011.6528.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI)

HSP 1 Score: 542 bits (1397), Expect = 9.540e-187
Identity = 269/398 (67.59%), Postives = 316/398 (79.40%), Query Frame = 1
Query:    4 SNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIEPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRFTPAFDA--QFKNKKMYLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTR-ELEGKAAEYNFEVPAQ--GSLSNANRKNGVSKEEIASVTRTYFKKNFPQELEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 1182
            SNR+VGGLL RLG+KRRRGRIK PPLN ER  RIR FLV+MD+AKRAEDAG+AVIVYMDESFVHQAHGS YSYFPSD+ GVVQDGIGRTTGKGLRMIMVHAITK GPLA+  +GFPI EGWFK         E G    +M DE+TAEFLWQAKLA GDYH AMTD MFM+WL+HR +PA++A  +F+ KKM LVLDNASYHH FD EVKVPETN+KK+NV+LLRK+G  S +V R E E    E+NFEVP++   S    NR+ GVS+ E+A+ TR Y + N+P+ LEE+  T+M++KGW LIWTPPYMP+FQPIELFWQHGK YVS++FE  R M +VW QIR GWYGD EW GQEGGWKAANC KLV+HAIG+M++W+      LSG IG+L+ P
Sbjct:  248 SNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKFCDGFPIEEGWFK---------ETGSGKKKMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRKEGEQGFVEHNFEVPSEPGSSFPAGNREGGVSRAEVATATREYIRLNYPERLEERVVTFMKKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRQGWYGDKEWSGQEGGWKAANCSKLVEHAIGEMNKWVRDRDAGLSGKIGNLQKP 636          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20011.6528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCN2_9PHAE9.210e-29197.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX2_9PHAE2.300e-28195.96Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP14_9PHAE3.470e-27498.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL68_9PHAE1.700e-26491.12Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LE74_9PHAE6.500e-26197.18Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF48_9PHAE4.680e-21489.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7U0_9PHAE3.660e-20775.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG34_9PHAE1.230e-19179.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7T4_9PHAE9.550e-19074.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNM6_ECTSI9.540e-18767.59DDE_3 domain-containing protein n=3 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig20011contigEcto-sp13_S_contig20011:1298..2479 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1184
Hectar predicted targeting categorymitochondrion
Exons1
Cds size1182
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463007.921824-CDS-Ecto-sp13_S_contig20011:1297..24791681463007.921824-CDS-Ecto-sp13_S_contig20011:1297..2479Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig20011 1298..2479 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig20011.6528.1prot_Ecto-sp13_S_contig20011.6528.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig20011 1298..2479 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig20011.6528.1

>prot_Ecto-sp13_S_contig20011.6528.1 ID=prot_Ecto-sp13_S_contig20011.6528.1|Name=mRNA_Ecto-sp13_S_contig20011.6528.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=394bp
MSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAED
AGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMV
HAITKHGPLAELQEGFPIREGWFKAKENRAKKIEPGEADFEMSDEQTAEF
LWQAKLATGDYHNAMTDGMFMQWLKHRFTPAFDAQFKNKKMYLVLDNASY
HHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRELEGKAAEYNFEVPA
QGSLSNANRKNGVSKEEIASVTRTYFKKNFPQELEEKAETYMREKGWGLI
WTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEW
DGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP
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mRNA from alignment at Ecto-sp13_S_contig20011:1298..2479+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig20011.6528.1 ID=mRNA_Ecto-sp13_S_contig20011.6528.1|Name=mRNA_Ecto-sp13_S_contig20011.6528.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1182bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20011:1298..2479+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGAATCGTGCCGTGGGAGGGTTGCTGCAGCGCCTTGGCTTCAAGCG CCGTAGGGGTAGGATCAAAATACCCCCGTTGAACGAGGAGAGGAAAAACC GCATCCGCCTCTTCCTTGTTAAGATGGACCTCGCGAAGAGGGCCGAGGAC GCTGGGGTCGCAGTCATTGTGTACATGGATGAGAGCTTTGTTCACCAGGC GCATGGTTCCGCGTACTCGTACTTTCCTTCTGACGATACGGGGGTTGTGC AGGATGGGATAGGCCGTACAACGGGGAAAGGTTTGCGTATGATCATGGTG CATGCGATCACGAAGCACGGGCCCTTGGCCGAGCTACAGGAGGGATTTCC TATCCGTGAGGGTTGGTTCAAGGCTAAGGAAAATCGTGCGAAGAAGATTG AGCCTGGGGAGGCGGATTTCGAAATGTCAGATGAGCAGACAGCAGAATTT CTGTGGCAAGCCAAGTTGGCAACCGGAGATTATCATAACGCAATGACGGA TGGGATGTTCATGCAGTGGTTGAAGCACCGATTTACCCCGGCCTTCGATG CGCAGTTCAAGAACAAGAAGATGTATCTCGTTCTCGATAACGCCTCATAC CACCACTGCTTTGACGAGGAGGTTAAGGTGCCCGAAACCAACAGTAAGAA GTACAACGTCGAACTCTTGCGCAAGTACGGTTGCACGTCGTTCAAGGTGA CGCGTGAGTTGGAGGGTAAGGCTGCTGAGTACAACTTTGAGGTACCGGCG CAGGGGTCGCTATCCAATGCGAACCGCAAGAACGGCGTCAGCAAAGAAGA GATAGCCTCCGTCACTCGGACGTACTTCAAAAAGAATTTTCCACAAGAGC TCGAGGAAAAGGCTGAGACGTACATGAGGGAGAAGGGGTGGGGGTTAATT TGGACACCGCCGTACATGCCGACTTTCCAGCCGATCGAGCTGTTCTGGCA GCACGGCAAGCATTACGTGAGCATTCATTTTGAGAAGGGGCGGAACATGT TGGATGTCTGGAAGCAAATCCGTCTCGGTTGGTATGGAGACCCGGAATGG GACGGTCAGGAGGGGGGGTGGAAGGCAGCCAACTGTGGAAAGTTGGTGCA GCATGCCATTGGCAAGATGGACGAGTGGATCGGCCTGTACGGTGGAAACC TGAGCGGTACGATCGGTAGCCTTGAGTATCCA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig20011:1298..2479+

>mRNA_Ecto-sp13_S_contig20011.6528.1 ID=mRNA_Ecto-sp13_S_contig20011.6528.1|Name=mRNA_Ecto-sp13_S_contig20011.6528.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1182bp|location=Sequence derived from alignment at Ecto-sp13_S_contig20011:1298..2479+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGAATCGTGCCGTGGGAGGGTTGCTGCAGCGCCTTGGCTTCAAGCG
CCGTAGGGGTAGGATCAAAATACCCCCGTTGAACGAGGAGAGGAAAAACC
GCATCCGCCTCTTCCTTGTTAAGATGGACCTCGCGAAGAGGGCCGAGGAC
GCTGGGGTCGCAGTCATTGTGTACATGGATGAGAGCTTTGTTCACCAGGC
GCATGGTTCCGCGTACTCGTACTTTCCTTCTGACGATACGGGGGTTGTGC
AGGATGGGATAGGCCGTACAACGGGGAAAGGTTTGCGTATGATCATGGTG
CATGCGATCACGAAGCACGGGCCCTTGGCCGAGCTACAGGAGGGATTTCC
TATCCGTGAGGGTTGGTTCAAGGCTAAGGAAAATCGTGCGAAGAAGATTG
AGCCTGGGGAGGCGGATTTCGAAATGTCAGATGAGCAGACAGCAGAATTT
CTGTGGCAAGCCAAGTTGGCAACCGGAGATTATCATAACGCAATGACGGA
TGGGATGTTCATGCAGTGGTTGAAGCACCGATTTACCCCGGCCTTCGATG
CGCAGTTCAAGAACAAGAAGATGTATCTCGTTCTCGATAACGCCTCATAC
CACCACTGCTTTGACGAGGAGGTTAAGGTGCCCGAAACCAACAGTAAGAA
GTACAACGTCGAACTCTTGCGCAAGTACGGTTGCACGTCGTTCAAGGTGA
CGCGTGAGTTGGAGGGTAAGGCTGCTGAGTACAACTTTGAGGTACCGGCG
CAGGGGTCGCTATCCAATGCGAACCGCAAGAACGGCGTCAGCAAAGAAGA
GATAGCCTCCGTCACTCGGACGTACTTCAAAAAGAATTTTCCACAAGAGC
TCGAGGAAAAGGCTGAGACGTACATGAGGGAGAAGGGGTGGGGGTTAATT
TGGACACCGCCGTACATGCCGACTTTCCAGCCGATCGAGCTGTTCTGGCA
GCACGGCAAGCATTACGTGAGCATTCATTTTGAGAAGGGGCGGAACATGT
TGGATGTCTGGAAGCAAATCCGTCTCGGTTGGTATGGAGACCCGGAATGG
GACGGTCAGGAGGGGGGGTGGAAGGCAGCCAACTGTGGAAAGTTGGTGCA
GCATGCCATTGGCAAGATGGACGAGTGGATCGGCCTGTACGGTGGAAACC
TGAGCGGTACGATCGGTAGCCTTGAGTATCCA
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