mRNA_Ecto-sp13_S_contig19943.6486.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19943.6486.1 vs. uniprot
Match: A0A6H5JAN0_9PHAE (NYD-SP28 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAN0_9PHAE) HSP 1 Score: 141 bits (356), Expect = 1.630e-37 Identity = 77/78 (98.72%), Postives = 78/78 (100.00%), Query Frame = 1
Query: 1 QTLEQQLEEMRATYQLNTEKLEYNYRVLTERDIENSATLSHQKRKLTKLKDALSGLVQRYQETDTRDKKRNEELTEEF 234
QTLEQQLEEMRATYQLNTEKLEYNYRVLTERD+ENSATLSHQKRKLTKLKDALSGLVQRYQETDTRDKKRNEELTEEF
Sbjct: 295 QTLEQQLEEMRATYQLNTEKLEYNYRVLTERDMENSATLSHQKRKLTKLKDALSGLVQRYQETDTRDKKRNEELTEEF 372
BLAST of mRNA_Ecto-sp13_S_contig19943.6486.1 vs. uniprot
Match: A0A835Z4S9_9STRA (Sperm tail-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4S9_9STRA) HSP 1 Score: 123 bits (308), Expect = 6.030e-31 Identity = 66/78 (84.62%), Postives = 73/78 (93.59%), Query Frame = 1
Query: 1 QTLEQQLEEMRATYQLNTEKLEYNYRVLTERDIENSATLSHQKRKLTKLKDALSGLVQRYQETDTRDKKRNEELTEEF 234
QTLEQQLEEMRATYQLNTEKLEYNYRVLTERD+ENSATL+HQKRKLTKLKDALS L R+ ET+ RD++RNEELTEE+
Sbjct: 270 QTLEQQLEEMRATYQLNTEKLEYNYRVLTERDMENSATLAHQKRKLTKLKDALSALAARHAETEARDRRRNEELTEEY 347
BLAST of mRNA_Ecto-sp13_S_contig19943.6486.1 vs. uniprot
Match: F0WFE3_9STRA (Uncharacterized protein AlNc14C82G5332 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WFE3_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.390e-24 Identity = 56/78 (71.79%), Postives = 68/78 (87.18%), Query Frame = 1
Query: 1 QTLEQQLEEMRATYQLNTEKLEYNYRVLTERDIENSATLSHQKRKLTKLKDALSGLVQRYQETDTRDKKRNEELTEEF 234
QTLEQQLE+MRA YQLNTEKLEYNYRVLTERD+ENSATLS KRKLT+ KD LS L +Y +++TRD++ N++LTE+F
Sbjct: 280 QTLEQQLEDMRAAYQLNTEKLEYNYRVLTERDMENSATLSQLKRKLTRFKDTLSTLRAKYNQSETRDRQNNQQLTEDF 357
BLAST of mRNA_Ecto-sp13_S_contig19943.6486.1 vs. uniprot
Match: A0A7S3XMC1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMC1_HETAK) HSP 1 Score: 101 bits (251), Expect = 6.740e-24 Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 1
Query: 1 QTLEQQLEEMRATYQLNTEKLEYNYRVLTERDIENSATLSHQKRKLTKLKDALSGLVQRYQETDTRDKKRNEELTEEF 234
QTL++QLEEMRATYQLNTEKLEYN+RVLTERD EN +TL+ QKR+ +LKDALS LV RY E D ++RN+ELTE++
Sbjct: 185 QTLQEQLEEMRATYQLNTEKLEYNFRVLTERDNENKSTLAQQKRRQNRLKDALSALVHRYHEADATARRRNDELTEKY 262
BLAST of mRNA_Ecto-sp13_S_contig19943.6486.1 vs. uniprot
Match: A0A024FY05_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FY05_9STRA) HSP 1 Score: 102 bits (255), Expect = 9.030e-24 Identity = 56/78 (71.79%), Postives = 68/78 (87.18%), Query Frame = 1
Query: 1 QTLEQQLEEMRATYQLNTEKLEYNYRVLTERDIENSATLSHQKRKLTKLKDALSGLVQRYQETDTRDKKRNEELTEEF 234
QTLEQQLE+MRA YQLNTEKLEYNYRVLTERD+ENSATLS KRKLT+ K+ LS L +Y +++TRD+++N+ LTEEF
Sbjct: 281 QTLEQQLEDMRAAYQLNTEKLEYNYRVLTERDMENSATLSQLKRKLTRFKETLSLLRTKYNQSETRDRQQNQVLTEEF 358
BLAST of mRNA_Ecto-sp13_S_contig19943.6486.1 vs. uniprot
Match: A0A7S0NBA1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0NBA1_9CRYP) HSP 1 Score: 91.3 bits (225), Expect = 6.300e-20 Identity = 49/78 (62.82%), Postives = 65/78 (83.33%), Query Frame = 1
Query: 1 QTLEQQLEEMRATYQLNTEKLEYNYRVLTERDIENSATLSHQKRKLTKLKDALSGLVQRYQETDTRDKKRNEELTEEF 234
Q LEQQLE MR+TYQLNTEKLEYN+RVL+ERD EN++T+ QKRKL +L+D+LS LV +Y +TD + ++ N ELT+E+
Sbjct: 284 QKLEQQLEVMRSTYQLNTEKLEYNFRVLSERDSENTSTIGQQKRKLARLQDSLSSLVAKYGKTDRQYRQENAELTDEY 361
BLAST of mRNA_Ecto-sp13_S_contig19943.6486.1 vs. uniprot
Match: A0A7S3WX96_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WX96_9SPIT) HSP 1 Score: 90.9 bits (224), Expect = 1.370e-19 Identity = 49/78 (62.82%), Postives = 61/78 (78.21%), Query Frame = 1
Query: 1 QTLEQQLEEMRATYQLNTEKLEYNYRVLTERDIENSATLSHQKRKLTKLKDALSGLVQRYQETDTRDKKRNEELTEEF 234
QTLEQQLEEMRATYQLN EKL+YNYRVL ERD EN+ T+ QK+KLT++ D LS L +Y + R K +N++LTEE+
Sbjct: 194 QTLEQQLEEMRATYQLNQEKLDYNYRVLVERDAENANTIKQQKKKLTRMTDVLSALKAKYAREEKRYKSQNQDLTEEY 271
BLAST of mRNA_Ecto-sp13_S_contig19943.6486.1 vs. uniprot
Match: R1FCG6_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FCG6_EMIHU) HSP 1 Score: 90.9 bits (224), Expect = 1.390e-19 Identity = 49/78 (62.82%), Postives = 61/78 (78.21%), Query Frame = 1
Query: 1 QTLEQQLEEMRATYQLNTEKLEYNYRVLTERDIENSATLSHQKRKLTKLKDALSGLVQRYQETDTRDKKRNEELTEEF 234
QTLE+QLEEMRATYQLN EKL+YNYRVL ERD EN+ T+ HQKRKLT++ D LS L ++ + R K+ N ELTE++
Sbjct: 229 QTLEKQLEEMRATYQLNQEKLDYNYRVLVERDTENTTTIKHQKRKLTRMADVLSALRAKHAREEKRYKQENAELTEDY 306
BLAST of mRNA_Ecto-sp13_S_contig19943.6486.1 vs. uniprot
Match: A0A0P1AXG6_PLAHL (Dynein regulatory complex protein 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AXG6_PLAHL) HSP 1 Score: 90.5 bits (223), Expect = 1.920e-19 Identity = 50/78 (64.10%), Postives = 61/78 (78.21%), Query Frame = 1
Query: 1 QTLEQQLEEMRATYQLNTEKLEYNYRVLTERDIENSATLSHQKRKLTKLKDALSGLVQRYQETDTRDKKRNEELTEEF 234
QTLEQQLE+MRATYQLNTE VLTERD+ENSATL QKRKL +LK+ L+ L+ +Y +TD RD++ N ELTEE+
Sbjct: 281 QTLEQQLEDMRATYQLNTEXXXXXXXVLTERDMENSATLGQQKRKLARLKETLATLITKYNQTDARDRRLNAELTEEY 358
BLAST of mRNA_Ecto-sp13_S_contig19943.6486.1 vs. uniprot
Match: A0A7R9UQQ2_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UQQ2_DIALT) HSP 1 Score: 89.0 bits (219), Expect = 4.910e-19 Identity = 49/78 (62.82%), Postives = 60/78 (76.92%), Query Frame = 1
Query: 1 QTLEQQLEEMRATYQLNTEKLEYNYRVLTERDIENSATLSHQKRKLTKLKDALSGLVQRYQETDTRDKKRNEELTEEF 234
QTLEQ LEEMRATYQLN+EKL+YNYRVL ERD EN+ T+ QKRK+ +L+D LSGL +Y D + K N +LT+EF
Sbjct: 290 QTLEQDLEEMRATYQLNSEKLDYNYRVLQERDQENTHTIQQQKRKVARLQDVLSGLKAKYAREDKKFKAENTDLTDEF 367 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19943.6486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19943.6486.1 >prot_Ecto-sp13_S_contig19943.6486.1 ID=prot_Ecto-sp13_S_contig19943.6486.1|Name=mRNA_Ecto-sp13_S_contig19943.6486.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=69bp MRATYQLNTEKLEYNYRVLTERDIENSATLSHQKRKLTKLKDALSGLVQRback to top mRNA from alignment at Ecto-sp13_S_contig19943:497..1663+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19943.6486.1 ID=mRNA_Ecto-sp13_S_contig19943.6486.1|Name=mRNA_Ecto-sp13_S_contig19943.6486.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1167bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19943:497..1663+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19943:497..1663+ >mRNA_Ecto-sp13_S_contig19943.6486.1 ID=mRNA_Ecto-sp13_S_contig19943.6486.1|Name=mRNA_Ecto-sp13_S_contig19943.6486.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=207bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19943:497..1663+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |