mRNA_Ecto-sp13_S_contig19848.6438.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig19848.6438.1
Unique NamemRNA_Ecto-sp13_S_contig19848.6438.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19848.6438.1 vs. uniprot
Match: D7FGP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGP2_ECTSI)

HSP 1 Score: 385 bits (988), Expect = 2.520e-128
Identity = 203/212 (95.75%), Postives = 207/212 (97.64%), Query Frame = 1 
Query:    1 PLSDQNRLRMIGIFMGLVCSSHFAVILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLFLHALLLTAHWVQYKGWSHAVHESIHFDPNTHGGVDTPMGWMAALCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLYVMHVLSRLESWXXXXXXXXXXXXXXXXXXPTSLVSVATNDNYTRLVLRNPKT 636
            P  +Q RLRMIGIFMGLVCSSHFA+ILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLF HALLLTAHWVQY+GWSHAVHESIHFDPNTHGGVDTPMGWMA LCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLY+MHVLSRLESWXXXXXXXXXXXXXXXXXXPTSLVSVATNDNYTRLVLRNPKT
Sbjct:   41 PTPNQYRLRMIGIFMGLVCSSHFAIILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLFFHALLLTAHWVQYEGWSHAVHESIHFDPNTHGGVDTPMGWMAGLCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLYIMHVLSRLESWXXXXXXXXXXXXXXXXXXPTSLVSVATNDNYTRLVLRNPKT 252
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BLAST of mRNA_Ecto-sp13_S_contig19848.6438.1 vs. uniprot
Match: D7G8Y6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y6_ECTSI)

HSP 1 Score: 382 bits (982), Expect = 1.050e-127
Identity = 202/212 (95.28%), Postives = 206/212 (97.17%), Query Frame = 1 
Query:    1 PLSDQNRLRMIGIFMGLVCSSHFAVILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLFLHALLLTAHWVQYKGWSHAVHESIHFDPNTHGGVDTPMGWMAALCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLYVMHVLSRLESWXXXXXXXXXXXXXXXXXXPTSLVSVATNDNYTRLVLRNPKT 636
            P  +Q RLRMIGIFMGLVCSSHFA+ILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLF HALLLTAHWVQY+GWSHAVHESIHFDPNTHGGVD PMGWMA LCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLY+MHVLSRLESWXXXXXXXXXXXXXXXXXXPTSLVSVATNDNYTRLVLRNPKT
Sbjct:   68 PTPNQYRLRMIGIFMGLVCSSHFAIILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLFFHALLLTAHWVQYEGWSHAVHESIHFDPNTHGGVDIPMGWMAGLCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLYIMHVLSRLESWXXXXXXXXXXXXXXXXXXPTSLVSVATNDNYTRLVLRNPKT 279
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BLAST of mRNA_Ecto-sp13_S_contig19848.6438.1 vs. uniprot
Match: D7G5Y8_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G5Y8_ECTSI)

HSP 1 Score: 385 bits (988), Expect = 1.680e-126
Identity = 203/212 (95.75%), Postives = 207/212 (97.64%), Query Frame = 1 
Query:    1 PLSDQNRLRMIGIFMGLVCSSHFAVILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLFLHALLLTAHWVQYKGWSHAVHESIHFDPNTHGGVDTPMGWMAALCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLYVMHVLSRLESWXXXXXXXXXXXXXXXXXXPTSLVSVATNDNYTRLVLRNPKT 636
            P  +Q RLRMIGIFMGLVCSSHFA+ILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLF HALLLTAHWVQY+GWSHAVHESIHFDPNTHGGVDTPMGWMA LCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLY+MHVLSRLESWXXXXXXXXXXXXXXXXXXPTSLVSVATNDNYTRLVLRNPKT
Sbjct:  199 PTPNQYRLRMIGIFMGLVCSSHFAIILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLFFHALLLTAHWVQYEGWSHAVHESIHFDPNTHGGVDTPMGWMAGLCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLYIMHVLSRLESWXXXXXXXXXXXXXXXXXXPTSLVSVATNDNYTRLVLRNPKT 410
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BLAST of mRNA_Ecto-sp13_S_contig19848.6438.1 vs. uniprot
Match: D7FK19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK19_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 2.600e-86
Identity = 138/212 (65.09%), Postives = 163/212 (76.89%), Query Frame = 1 
Query:    1 PLSDQNRLRMIGIFMGLVCSSHFAVILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLFLHALLLTAHWVQYKGWSHAVHESIHFDPNTHG-GVDTPMGWMAALCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLYVMHVLSRLESWXXXXXXXXXXXXXXXXXXPTSLVSVATNDNYTRLVLRNPK 633
            P  +Q  L  +  + G +CSSHFAVILVPV+RDSKIWS+LGVP+ERAVLYH  AGHLAFT++ +HA L   +WV Y GW+HA+ ESIH     H  G+D PMGWMA LC +PMW TS+N+VRR+YYSLFKLAH+LFIGVFVF  MHW+ N LY+LGGLTLY +H++SRLESW  XXXXXXX         PTSLVS  TN+NYTRLVLRNPK
Sbjct:  189 PTPNQWMLFRVATYFGYICSSHFAVILVPVARDSKIWSSLGVPYERAVLYHTFAGHLAFTTMAVHAFLFVVYWVWYDGWAHAIRESIHAPAEKHHHGLDIPMGWMALLCGLPMWITSINFVRRRYYSLFKLAHFLFIGVFVFGAMHWSRNTLYYLGGLTLYTLHIMSRLESWKRXXXXXXXFKPETKAS-PTSLVSAYTNENYTRLVLRNPK 399
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BLAST of mRNA_Ecto-sp13_S_contig19848.6438.1 vs. uniprot
Match: A0A6H5KAK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK2_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 2.440e-76
Identity = 116/184 (63.04%), Postives = 137/184 (74.46%), Query Frame = 1 
Query:   85 PVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLFLHALLLTAHWVQYKGWSHAVHESIHFDPNTHG-GVDTPMGWMAALCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLYVMHVLSRLESWXXXXXXXXXXXXXXXXXXPTSLVSVATNDNYTRLVLRNPK 633
            P +RDSKIWS+LGVP+ERAVLYH  AGHLAFT++ +HA L   +WV Y GW+HA+ ESIH     H  G+D PMGWMA LC +PMW TS+N+VRR+YYSLFKLAH+LFIGVFVF  MHW+ N LY+LGGLTLY +H++SRLESW                  PTSLVS  TN+NYTRLVLRNPK
Sbjct:  124 PAARDSKIWSSLGVPYERAVLYHTFAGHLAFTTMAVHAFLFVVYWVWYDGWAHAIRESIHAPAEKHHHGLDIPMGWMALLCGLPMWITSINFVRRRYYSLFKLAHFLFIGVFVFGAMHWSRNTLYYLGGLTLYTLHIMSRLESWKRWFKPETKAS-------PTSLVSAYTNENYTRLVLRNPK 300
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BLAST of mRNA_Ecto-sp13_S_contig19848.6438.1 vs. uniprot
Match: D8LNK5_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK5_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 4.740e-71
Identity = 126/211 (59.72%), Postives = 152/211 (72.04%), Query Frame = 1 
Query:    1 PLSDQNRLRMIGIFMGLVCSSHFAVILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLFLHALLLTAHWVQYKGWSHAVHESIHFDPNTHGGVDTPMGWMAALCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLYVMHVLSRLESWXXXXXXXXXXXXXXXXXXPTSLVSVATNDNYTRLVLRNPK 633
            PL   + L +I  + G   S HFAVIL+PV+RDSK+WSA+G+PFERAVLYH IAGHLAF ++FLHA L  +  V   GW HA   S     + +G VD PMGW A LCA+PMW TSVN+VRR++YSLFK +HWLFIGVF+F  +HW  NA+YF GGL LY+MHV+SR    XXXXXXXXXX        PTSL+ V T +NYTRLVL+NPK
Sbjct:  137 PLGKLSPLSVIAAYFGFAASCHFAVILIPVARDSKLWSAVGIPFERAVLYHVIAGHLAFATMFLHAFLFLSSCVWENGWRHAWEVSTLQANDDYGDVDVPMGWAAGLCALPMWITSVNYVRRRWYSLFKASHWLFIGVFIFGALHWDTNAIYFGGGLALYIMHVMSRXXX-XXXXXXXXXXLKPAESPSPTSLLDVHTTENYTRLVLKNPK 346
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BLAST of mRNA_Ecto-sp13_S_contig19848.6438.1 vs. uniprot
Match: D7G4X0_ECTSI (Ferric chelate reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X0_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 4.220e-51
Identity = 92/204 (45.10%), Postives = 127/204 (62.25%), Query Frame = 1 
Query:   22 LRMIGIFMGLVCSSHFAVILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLFLHALLLTAHWVQYKGWSHAVHESIHFDPNTHGGVDTPMGWMAALCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLYVMHVLSRLESWXXXXXXXXXXXXXXXXXX-PTSLVSVATNDNYTRLVLRNP 630
            L+ +  + G   +  F+++L+PVSRDSKIWS +GVP ERAVLYH   GHLAF SLFLH +L  A++VQ  GW++AV+ S H+      GV+ P G++A LCA+PMW  S+++ RR+YY LFK +H+LFIGVF   ++H+     Y L G  LY++H + RL +W                     +LV +   D YTRLVLRNP
Sbjct:   31 LKNVAKYTGFAAAIQFSIVLIPVSRDSKIWSTIGVPVERAVLYHTTLGHLAFVSLFLHGILYMAYYVQKHGWAYAVNSSFHYKGK---GVNVPAGFIAGLCALPMWVLSLHFFRREYYRLFKTSHFLFIGVFGAGMVHYDGFVHYLLAGFVLYLVHAVYRLGNWNWWSVLRQCFCKSSARGCGDCALVHLEAGDGYTRLVLRNP 231
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BLAST of mRNA_Ecto-sp13_S_contig19848.6438.1 vs. uniprot
Match: A0A6H5KRK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRK1_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 4.730e-50
Identity = 92/204 (45.10%), Postives = 126/204 (61.76%), Query Frame = 1 
Query:   22 LRMIGIFMGLVCSSHFAVILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLFLHALLLTAHWVQYKGWSHAVHESIHFDPNTHGGVDTPMGWMAALCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLYVMHVLSRLESWXXXXXXXXXXXXXXXXXXP-TSLVSVATNDNYTRLVLRNP 630
            L+ I  + G   +  F+++L+PVSRDSKIWS +GVP ERA+LYH   GHLAF SLFLH +L  A++VQ  GW++AV+ S H+      GV+ P G++A LCA+PMW  S+++ RR+YY LFK  H+LFIGVF   ++H+     Y L G  LY++H + RL +W                     +LV +   D YTRLVLRNP
Sbjct:  185 LKNIAKYTGFAAAIQFSIVLIPVSRDSKIWSTIGVPVERAILYHTTLGHLAFVSLFLHGILYMAYYVQKHGWAYAVNSSFHYKGK---GVNVPAGFIAGLCALPMWVLSLHFFRREYYRLFKTGHFLFIGVFGAGMVHYDGFVHYLLAGFVLYLVHAVYRLGNWNWWSVLRQCFCKSSARGCGGCALVHLEAGDGYTRLVLRNP 385
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BLAST of mRNA_Ecto-sp13_S_contig19848.6438.1 vs. uniprot
Match: A0A835YW60_9STRA (Ferric oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW60_9STRA)

HSP 1 Score: 149 bits (377), Expect = 4.350e-38
Identity = 73/195 (37.44%), Postives = 108/195 (55.38%), Query Frame = 1 
Query:    1 PLSDQNRLRMIGIFMGLVCSSHFAVILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLFLHALLLTAHWVQYKGWSHAVHESIHFDPNTHG------------------------GVDTPMGWMAALCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLYVMHVLSRLESW 513
            P   Q +L M  + +G + ++  A++L+PVSR S++W+AL VPFERAVLYH I GH  F  + LHA L   +W+ ++GW +   ES+ +D ++                           +  P GWMA L  +P+W TS  +VRR +YSLFK  HW+ + V  FSVMH+   A + +  + LY  H+ +RL SW
Sbjct:  207 PNMAQYKLYMAALGIGFLATTDLALVLLPVSRTSRLWAALDVPFERAVLYHKIIGHTFFWDVVLHAFLCCVYWIWFQGWDYMWSESVTWDGSSDSYRHSRSVLERQAPDVVTEPLDGVKHISIPAGWMALLFGVPLWITSTGYVRRHWYSLFKAVHWMCVPVLYFSVMHYYGVAAFLIAPVGLYAAHIATRLASW 401
[Close]
BLAST of mRNA_Ecto-sp13_S_contig19848.6438.1 vs. uniprot
Match: A0A6H5JBW2_9PHAE (Ferric oxidoreductase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBW2_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 5.140e-18
Identity = 52/120 (43.33%), Postives = 67/120 (55.83%), Query Frame = 1 
Query:  280 HGGVDTPMGWMAALCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLYVMHV-LSRLESWXXXXXXXXXXXXXXXXXX--PTSLVSVATNDNYTRLVLRNP 630
            +G VD PMGW A LCA+PMW TSVN+VRR++Y LFK +HWLFIGVF+F  +H +     F        +H  +S L S                     PTSL+ V T +N T LVL++P
Sbjct:    8 YGNVDVPMGWAAQLCALPMWITSVNYVRRRWYRLFKASHWLFIGVFIFVALHSSVVISPFSPLFLRRTIHSRVSALFSTPCRNVWRYWNRCLKPADSASPTSLLDVHTTENCTCLVLKSP 127
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19848.6438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGP2_ECTSI2.520e-12895.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8Y6_ECTSI1.050e-12795.28Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G5Y8_ECTSI1.680e-12695.75Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D7FK19_ECTSI2.600e-8665.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAK2_9PHAE2.440e-7663.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNK5_ECTSI4.740e-7159.72Ferric reductase n=1 Tax=Ectocarpus siliculosus Ta... [more]
D7G4X0_ECTSI4.220e-5145.10Ferric chelate reductase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KRK1_9PHAE4.730e-5045.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YW60_9STRA4.350e-3837.44Ferric oxidoreductase domain-containing protein n=... [more]
A0A6H5JBW2_9PHAE5.140e-1843.33Ferric oxidoreductase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19848contigEcto-sp13_S_contig19848:1..2043 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score374.4
Seed ortholog evalue3.4e-101
Seed eggNOG ortholog2880.D7G5M5
Preferred nameAIM14
Model size636
KEGG koko:K00521
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0006873,GO:0006875,GO:0006915,GO:0008150,GO:0008152,GO:0008219,GO:0009987,GO:0012501,GO:0012505,GO:0016020,GO:0016021,GO:0016175,GO:0016491,GO:0016651,GO:0016722,GO:0019725,GO:0030003,GO:0031090,GO:0031224,GO:0032956,GO:0032970,GO:0033043,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0048471,GO:0048878,GO:0050664,GO:0050789,GO:0050794,GO:0050801,GO:0051128,GO:0051493,GO:0055065,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0097038,GO:0098588,GO:0098771,GO:0098805,GO:0098852
Exons4
EggNOG free text desc.oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor
EggNOG OGsKOG0039@1,KOG0039@2759
EC1.16.1.7
Cds size609
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463001.0433588-CDS-Ecto-sp13_S_contig19848:0..1181681463001.0433588-CDS-Ecto-sp13_S_contig19848:0..118Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19848 1..118 -
1681463001.0622258-CDS-Ecto-sp13_S_contig19848:538..6211681463001.0622258-CDS-Ecto-sp13_S_contig19848:538..621Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19848 539..621 -
1681463001.0787225-CDS-Ecto-sp13_S_contig19848:1071..12201681463001.0787225-CDS-Ecto-sp13_S_contig19848:1071..1220Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19848 1072..1220 -
1681463001.0890656-CDS-Ecto-sp13_S_contig19848:1757..20161681463001.0890656-CDS-Ecto-sp13_S_contig19848:1757..2016Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19848 1758..2016 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463001.0993867-UTR-Ecto-sp13_S_contig19848:2016..20431681463001.0993867-UTR-Ecto-sp13_S_contig19848:2016..2043Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig19848 2017..2043 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19848.6438.1prot_Ecto-sp13_S_contig19848.6438.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig19848 1..2016 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig19848.6438.1

>prot_Ecto-sp13_S_contig19848.6438.1 ID=prot_Ecto-sp13_S_contig19848.6438.1|Name=mRNA_Ecto-sp13_S_contig19848.6438.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=203bp
MIGIFMGLVCSSHFAVILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAF
TSLFLHALLLTAHWVQYKGWSHAVHESIHFDPNTHGGVDTPMGWMAALCA
IPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTL
YVMHVLSRLESWKRWRYWNRWFSSDASKASPTSLVSVATNDNYTRLVLRN
PKT
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mRNA from alignment at Ecto-sp13_S_contig19848:1..2043-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig19848.6438.1 ID=mRNA_Ecto-sp13_S_contig19848.6438.1|Name=mRNA_Ecto-sp13_S_contig19848.6438.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2043bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19848:1..2043- (Ectocarpus species13 EcNAP12_S_4_19m)
CCGTTGTCGGACCAAAACAGGTTGAGAATGATTGGTATCTTCATGGGGCT
GGTGTGCTCCTCCCACTTCGCGGTCATCCTCGTTCCGGTATCCCGCGACA
GCAAGATCTGGTCGGCCCTCGGGGTACCGTTCGAGCGGGCCGTGCTCTAC
CACGCCATCGCCGGCCACCTCGCCTTCACCTCCCTCTTCCTCCATGCCCT
CCTCCTGACGGCTCACTGGGTCCAGTACAAGGGCTGGAGCCACGCCGTCC
ACGAGTCCATCCACTTCGACCCCAACACCCACGGAGGTAGACGCCTACGG
CTCTTCAGGAAACTCCTCTTGCCTCACTTGTCCGAAGGCATTACTGCAAG
ATCTTACCCTGGCAGCATTCTGGCCCGGTAGTAGGCGATGTCTTGAATAT
TTTCGTCTCGAACGCATGTACACGTGGTGCGTGGGTAGAATTGTCGTCTT
TAATGTTGACGTTGTTGATGGTGATATGGCAATGAAAAGCCGCTCGCTTC
AATGACGTTTTTTTTGGCGGCCGATGTTGTGCCCTATCGCATGCCCCTTT
CCGTTTTTCCTGCACCGGTGAGCCCGCGATAATCATCACCCACCCGTGGT
CACCACGCGAAACAATGAAGCGATCGTGATAACACACGAGGAAATAAGGA
CCAGAACCTTTTCAGTGCGTGACCCCTTCCCAGCCCCCCCCAGTCAGAAA
CTACGCCATGCCTTATCTATGGTTCCAGCGGTCATCGACACTCGGATGTA
CCAAGGACTAAACAACTCTCCCACACGGTTCACCTTGTCCTCCCATATCT
CCGACCCCTTCTTTGTGCCGAAGGCGTCGACACCCCCATGGGTTGGATGG
CTGCACTCTGCGCGATCCCGATGTGGGCTACCTCGGTGAACTGGGTCCGG
CGAAAGTACTACAGCCTGTTCAAGCTAGCACACTGGCTCTTCATCGGCGT
CTTCGTGTTCAGCGTTATGCACGTGCGTACATGACATCGTATCATCATAT
TTTAAATGGGGGAGGGGGGGGTGAGCCGGGGGCATATATGGGACGAGACC
CGGACATAGTCCTTTACTCTACTTACGAAAAATAGGAGTTATGACTAGGG
GCATCCAGCTACGTATTATATAGTTGGGCTGCTTTGCGTTTTCTGGGGAA
GACCTAATTTGCCTTCTGACAAAATTGAAGTAGGCCCCCGTCCGACTTCC
CTCGTTCATGTAGTTTCGCCGTGCACATATGTTTGGGGACCGGTGGTACT
CTCACTTAACGTCTCATTTTCTGGCCGCTGACAACAAGTAGCAAATTCTT
CAAGCATACGGACTTCATTCACCAATGCCTGCGCTCACCTGCGGTAACAG
TTGTCCCTAAGGTTCTCTCTTGTTTGTATCGCCGTCTGTGATCTTTGTTG
ATGCTTCGCTCCTGCCCTTCAGTGGGCTCCCAACGCGCTCTACTTCCTGG
GCGGGTTGACACTGTACGTCATGCACGTGCTGTCGAGATTGGAGTCGTGG
AAGCGGTGAGTCTAGTGCTTTCTCCTGTTGTGCCGATGATGGGGCCTCCC
TCCCTCGGCTTTATGTTGGTTCATCCTTGACCCTGCGATTGATTGTTGTT
CCTTGACCGCGTGCGTGCGTCATGGCATGGAAGCCTCGAATGCATTCCGA
GACTAACTGGTAGAATATCGACCTGATTTTCAGGCATCCTCCCCAAGCCC
GATCTTTGCCTCGCGCCTTCCCTTCGGCACATATTCATTCGTACTGTGTG
GTGCCTAGGCAAAGCGTCAGTGCTTCCGCTCACCATATCCCGTGAATACG
CTACTTCGTCCTTCTTCCTTCTAAATAAACGTCAACTGGCATGTTCGAGC
CATGTGACCTGCTGCTGACAAGTACCTCATCCACCCTCCGAATCAAATCT
CCCCCGCTCCCATGCCCCCGCTCAGGTGGCGTTACTGGAACCGATGGTTC
AGCTCGGACGCCAGCAAGGCCAGCCCGACCAGCCTCGTCAGCGTGGCAAC
GAACGACAACTACACGCGGCTGGTGCTTCGCAACCCCAAGACC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19848:1..2043-

>mRNA_Ecto-sp13_S_contig19848.6438.1 ID=mRNA_Ecto-sp13_S_contig19848.6438.1|Name=mRNA_Ecto-sp13_S_contig19848.6438.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=609bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19848:1..2043- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATTGGTATCTTCATGGGGCTGGTGTGCTCCTCCCACTTCGCGGTCAT
CCTCGTTCCGGTATCCCGCGACAGCAAGATCTGGTCGGCCCTCGGGGTAC
CGTTCGAGCGGGCCGTGCTCTACCACGCCATCGCCGGCCACCTCGCCTTC
ACCTCCCTCTTCCTCCATGCCCTCCTCCTGACGGCTCACTGGGTCCAGTA
CAAGGGCTGGAGCCACGCCGTCCACGAGTCCATCCACTTCGACCCCAACA
CCCACGGAGGCGTCGACACCCCCATGGGTTGGATGGCTGCACTCTGCGCG
ATCCCGATGTGGGCTACCTCGGTGAACTGGGTCCGGCGAAAGTACTACAG
CCTGTTCAAGCTAGCACACTGGCTCTTCATCGGCGTCTTCGTGTTCAGCG
TTATGCACTGGGCTCCCAACGCGCTCTACTTCCTGGGCGGGTTGACACTG
TACGTCATGCACGTGCTGTCGAGATTGGAGTCGTGGAAGCGGTGGCGTTA
CTGGAACCGATGGTTCAGCTCGGACGCCAGCAAGGCCAGCCCGACCAGCC
TCGTCAGCGTGGCAACGAACGACAACTACACGCGGCTGGTGCTTCGCAAC
CCCAAGACC
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