mRNA_Ecto-sp13_S_contig19802.6420.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19802.6420.1 vs. uniprot
Match: D8LBY9_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBY9_ECTSI) HSP 1 Score: 262 bits (670), Expect = 5.870e-81 Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 1
Query: 1 VQNFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNG 420
VQNFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTS+ANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNG
Sbjct: 160 VQNFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSIANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNG 299
BLAST of mRNA_Ecto-sp13_S_contig19802.6420.1 vs. uniprot
Match: A0A835ZCI8_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCI8_9STRA) HSP 1 Score: 164 bits (416), Expect = 3.260e-44 Identity = 86/139 (61.87%), Postives = 101/139 (72.66%), Query Frame = 1
Query: 1 VQNFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLN 417
V NFDV T AK++MNV LGF +YG LAS+ FTLLFS SL AGRAVD +SRK ATVA+C WS A +A G P V LRV QG AQAFTTPAAYTM++D FP R TAN+IYSSG+Y+GG LASL++L+N
Sbjct: 129 VVNFDVPATTENAKDYMNVALGFGAAEYGALASYGFTLLFSASSLAAGRAVDALSRKGATVAACAAWSLATAAQGLARGLPDVLALRVAQGVAQAFTTPAAYTMLADAFPQRYRATANAIYSSGIYVGGGLASLTVLIN 267
BLAST of mRNA_Ecto-sp13_S_contig19802.6420.1 vs. uniprot
Match: A0A7S3XVU5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVU5_HETAK) HSP 1 Score: 144 bits (363), Expect = 1.710e-38 Identity = 73/127 (57.48%), Postives = 91/127 (71.65%), Query Frame = 1
Query: 7 NFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGG 387
NFD A T A+EFMNV L FD+TQ+ LLASF FTLL+S S+ AGRA DVV++KT + + +WSA T +A+ F VFGLRVL G AQAFT PAAY++++ FPA RG ANS+Y+SG Y GG
Sbjct: 148 NFDAAATTEAAREFMNVALNFDKTQFSLLASFGFTLLYSVTSIFAGRAADVVNKKTLAIGAATLWSATTLATGMASTFEQVFGLRVLTGLAQAFTNPAAYSLLAQSFPADRRGFANSVYASGAYYGG 274
BLAST of mRNA_Ecto-sp13_S_contig19802.6420.1 vs. uniprot
Match: A0A0G4GFP1_VITBC (MFS domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GFP1_VITBC) HSP 1 Score: 128 bits (322), Expect = 1.630e-30 Identity = 73/131 (55.73%), Postives = 89/131 (67.94%), Query Frame = 1
Query: 25 TEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLN 417
TEA A+ +N+ LGFDE QY +ASF FT+ FS AG VD +SR+ AT L W+AM A + A F +FGLRV QG AFTTPAAY +++D+FPA+ R TANS Y S VYLG ALASLS+LLN
Sbjct: 153 TEA-ARRLINIDLGFDEKQYSFIASFGFTIFFSAAGFFAGGQVDKMSRRVATGLPALGWAAMTALQAGAQSFGQLFGLRVGQGVFMAFTTPAAYALLADIFPANQRATANSFYVSAVYLGQALASLSILLN 282
BLAST of mRNA_Ecto-sp13_S_contig19802.6420.1 vs. uniprot
Match: A0A7S0I3L6_9CRYP (Hypothetical protein n=2 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I3L6_9CRYP) HSP 1 Score: 125 bits (313), Expect = 2.780e-29 Identity = 66/137 (48.18%), Postives = 89/137 (64.96%), Query Frame = 1
Query: 7 NFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLN 417
+F + TE K++MN+ L F E QY +LASF FT L++ CSLIAGRA D +R +A+ WS AG +A F V G R L G +QAFT P AY +I+ FP S TANS+++S VY+GGA+ASLS+L++
Sbjct: 152 SFKIPDTEENEKKYMNIDLNFGEEQYSILASFGFTALYTFCSLIAGRASDKGNRAFIVLAAAAAWSLSTAGQGIARSFEEVLGFRSLMGISQAFTNPPAYGIIASSFPESQIATANSVFASAVYIGGAMASLSILVD 288
BLAST of mRNA_Ecto-sp13_S_contig19802.6420.1 vs. uniprot
Match: L1J1Q9_GUITC (MFS domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J1Q9_GUITC) HSP 1 Score: 120 bits (300), Expect = 3.410e-28 Identity = 64/135 (47.41%), Postives = 86/135 (63.70%), Query Frame = 1
Query: 7 NFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLL 411
+F + TE A ++MN+ L F+E QY +LASF FT L++ CSLIAGRA D +R + + WS AG ++ F V R L G +QAFT P AY +I+ FP S TANS+++S VY+GGALASLS+L
Sbjct: 28 SFKIPKTEDNANKYMNIDLNFEEEQYSILASFGFTALYTFCSLIAGRASDKGNRAFIVLVAAAGWSLATAGQGISRSFEQVLAFRSLMGVSQAFTNPPAYGLIASSFPESQIATANSVFASAVYIGGALASLSIL 162
BLAST of mRNA_Ecto-sp13_S_contig19802.6420.1 vs. uniprot
Match: A0A7S0UBY6_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UBY6_HEMAN) HSP 1 Score: 118 bits (295), Expect = 1.160e-27 Identity = 65/124 (52.42%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 46 FMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLN 417
+MNV LGFDE QY LLASF+FT L++ SL AGRA D R + +WS T+VA F V LR +QG +QAF P AY +I+ LF TANSIY+SGVY+GGALASLS+L++
Sbjct: 168 YMNVDLGFDEGQYSLLASFAFTALYTVASLFAGRAADKFDRAKVLTGAAALWSVSTCATAVAASFDNVAALRGIQGVSQAFVGPQAYGLIASLFSGQGLATANSIYASGVYVGGALASLSILMD 291
BLAST of mRNA_Ecto-sp13_S_contig19802.6420.1 vs. uniprot
Match: R1BM06_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BM06_EMIHU) HSP 1 Score: 118 bits (295), Expect = 6.120e-27 Identity = 68/159 (42.77%), Postives = 98/159 (61.64%), Query Frame = 1
Query: 25 TEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNGK-----STASRSVYSVWVPSTLFVLAA 486
++ +A EFMNV L DE QYGLL+S++FT L+S SL AG A D+ +R VA+ +WS AA A+ +P + R + G +QAF +PAAY +I + F RG AN++YSSG+Y+G ALASLS L N + + + +S+ +TL +AA
Sbjct: 99 SDGSAHEFMNVALELDEVQYGLLSSYAFTALYSVASLAAGAACDIFARAPVLVAASALWSGAAALQGCASSYPQLLASRAVLGVSQAFCSPAAYPLIGEAFSKDSRGRANAVYSSGLYIGYALASLSALANRRIGWRAMSLLTAAFSLLASATLAAVAA 257
BLAST of mRNA_Ecto-sp13_S_contig19802.6420.1 vs. uniprot
Match: A0A7S1YNZ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YNZ0_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.280e-26 Identity = 68/137 (49.64%), Postives = 83/137 (60.58%), Query Frame = 1
Query: 7 NFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLN 417
NF A T TA MNV LGF E QYG LAS +FT LF+ SL AG D RK T +C+ W+ T+ A+ + V R+ G A AF TP+AYT+I DL P A+S+Y SGVYLGGALASLS+LL+
Sbjct: 88 NFSDAPT-VTAANAMNVDLGFSEAQYGALASVAFTALFAFASLAAGNLADKSDRKLLTSVACVSWAVATIITASASSYTEVVAARIFMGLACAFATPSAYTLIRDLIPKERAALASSLYGSGVYLGGALASLSILLD 223
BLAST of mRNA_Ecto-sp13_S_contig19802.6420.1 vs. uniprot
Match: A0A7S1HNS8_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HNS8_HEMAN) HSP 1 Score: 110 bits (276), Expect = 1.290e-26 Identity = 65/140 (46.43%), Postives = 86/140 (61.43%), Query Frame = 1
Query: 7 NFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWS-AMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNGK 423
NF T A +E++NV LGF +QY LLAS+ FTLL++ SL AGR D R A+ LVWS A+A S FP V+ RV+QG A AFT P A +++++ F A IYS+G+YLGG+LASLS+L N +
Sbjct: 38 NFAAGTGAAARREYINVDLGFGPSQYALLASYGFTLLYAVVSLPAGRVADTTDRARTLAAAALVWSIALAVQGSPIASFPVVWLCRVVQGIAMAFTGPQAISLLAESFLGPSLAVATGIYSTGLYLGGSLASLSILSNAR 177 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19802.6420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19802.6420.1 >prot_Ecto-sp13_S_contig19802.6420.1 ID=prot_Ecto-sp13_S_contig19802.6420.1|Name=mRNA_Ecto-sp13_S_contig19802.6420.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=152bp MNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVback to top mRNA from alignment at Ecto-sp13_S_contig19802:30..2950+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19802.6420.1 ID=mRNA_Ecto-sp13_S_contig19802.6420.1|Name=mRNA_Ecto-sp13_S_contig19802.6420.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2921bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19802:30..2950+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19802:30..2950+ >mRNA_Ecto-sp13_S_contig19802.6420.1 ID=mRNA_Ecto-sp13_S_contig19802.6420.1|Name=mRNA_Ecto-sp13_S_contig19802.6420.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=456bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19802:30..2950+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |