mRNA_Ecto-sp13_S_contig1975.6382.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1975.6382.1 vs. uniprot
Match: D7FQS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS2_ECTSI) HSP 1 Score: 1454 bits (3763), Expect = 0.000e+0 Identity = 798/969 (82.35%), Postives = 838/969 (86.48%), Query Frame = 1
Query: 1 MFSSVFDKVVSATAPDTLGTFPPRADLPASSSTLCCLSFADRFMSHYPVARSATVDDVVDGGILLGRTGPTTGIAISAGDVETIMVSAAELGGRLAAALAGTVRSKRRDLETAPVFDLLAKVRGIFGNRLTSIGREIRVSRNAEAEKDETLLLRQIHALKNAAMDSCNGEKWCFLVSSGGESLVVCSVPLPAVEEGGSYGCDFLLFDPWPRPAMKLRGSYIVKFTTVRGLQLHILSALGEIWRSSGLSQENGALKKEFVGLSVVMRAKGRGAEQHEADVAARRMLEDSVTALRKAEKAAAIKIKRQEVEALRKALRKTSQQQNLGPSAPTSIGMFRSTDGARGPENVVNRNNPSTGGGVFQRSGHSYHHLEQPDEISERSNLLAETSTPGGGGAVTLNPHGDDVAGNVAEGETTDMLDSISLEVGLDDQRSPQDGNVISTSRDSSARDRRNLRPPAADVSPTLSSRRSQRGEDRRRRWSEEDDTTLPVDSGCSRGLGVATARETPATASKREQEVSQPSTGDVHSELVERPRQVVRDRSIDNGVCLPSRSDNTAVPDDPLHRALLRSIEGEGLAEYSKRAYSVYRTHGVIEDRTEADEYLAPGTKSFHQLSRSANQVYDHRATASPTTDELDMMAPSSEKNTDVAGNTQLVAMEPDTKEVRGTESVPAGMDIRSDPVRPFSPPPVSPQLLRSTDRRPPPISDENRTAFAATSGSDRRNLGVCEADDVASYITKSKEMTPPSEGLRSGLRVPRAGRNLGLTSSDARGAPGDNREGRLTGFRGDMRGNESAPPPPATTTVPTRPREAWTKEQTIVQQHDNWNLEEDKQGPDLSASTAGGDAAGVVPGENGDDHSDRASAAPNKPVTPGDGTSGQRRACRQAKKSKGSRKARK-GAATVREARVGCDTEKGSRNGDCASLDPPRNDEHALEAERSGGXXXXRSKGKSTTFAGCIPITTLASADSGQPKAETH 2904
MFSSVFDKVVSATAPDTLGTFPPR DLPASSSTLCCLSFADRF+SHYP+AR+ATVDDVVDGGILLGRTGPTTGIAISAGDVETIM SAAELGGRLAAALAGTVRSKRRDL TAPV DLLAKVRGIFGNRLT IGREIRVSRNAEAEKDETLLLRQIHALKNAA++SCN EKWCFLVSSGGESLVVCSVPLPAVEEGGS GCDFL+FDPWPRPAMKLRGSYIVKFTTVRGLQLH+LSALGEIWRSSG SQE+GALKKE VGLSVVMRAKGRGAEQHE D+AARRMLEDSVTALRKAEKAAAIKIKRQEVEALRKALRK SQQQ+L PSAP SIGMF STDGA G ENV RNNPSTGG +FQRS HSY HLEQPDEISERSNLLAETS PGGGGA LNPH +DVAGNVAEG T DML SISLE GLDD+R+ DGNVISTSRDSSA RRNLRPPA DVSP LS RRSQ SEEDDT LPVDSG SRGLGVATARETPATASKREQEVS PSTG+ H+E +RPR DRSID GVCLPSR T V DDPLHRALLRSIEGEGLAEYS+RAYSVYRTHGVI+DRTE DEYLAP TKSFHQLSRSANQVYDHRAT SP TDELDMMA SSEKN+D AG T VA+E DTKE+RGTES P GMDIRSDPV PFSPPPVSPQLLR T RR PP SDE RTAFAATS SDR+NLGVCEA DVAS+ITKS++ TPPSEGLRSGLR PRAGRNLGLTSSDAR PGD+REGRLTGFRGDMRG+ES VP+RPREAWT+EQTIVQQHD+ NLEED+Q PDLS + AGG AAGVV ENGDDHSDRASAAPNKPVTP DGT+GQRRA RQAKKSKG R+A K GAATVREARVGCDTEKGSR+G+CASLDPPRNDE+A EAERSGG RSK PI + A G P E +
Sbjct: 1 MFSSVFDKVVSATAPDTLGTFPPRGDLPASSSTLCCLSFADRFISHYPIARNATVDDVVDGGILLGRTGPTTGIAISAGDVETIMGSAAELGGRLAAALAGTVRSKRRDLATAPVSDLLAKVRGIFGNRLTCIGREIRVSRNAEAEKDETLLLRQIHALKNAALESCNREKWCFLVSSGGESLVVCSVPLPAVEEGGSCGCDFLVFDPWPRPAMKLRGSYIVKFTTVRGLQLHLLSALGEIWRSSGRSQEDGALKKELVGLSVVMRAKGRGAEQHEVDLAARRMLEDSVTALRKAEKAAAIKIKRQEVEALRKALRKPSQQQHLAPSAPISIGMFGSTDGASGLENVDKRNNPSTGGRLFQRSVHSYRHLEQPDEISERSNLLAETSPPGGGGAGALNPHREDVAGNVAEGVTPDMLHSISLEAGLDDRRAADDGNVISTSRDSSA-GRRNLRPPATDVSPPLSLRRSQXXXXXXXXXSEEDDTILPVDSGRSRGLGVATARETPATASKREQEVSLPSTGNAHNETAKRPR----DRSIDKGVCLPSRPGTTTVRDDPLHRALLRSIEGEGLAEYSRRAYSVYRTHGVIQDRTEPDEYLAPETKSFHQLSRSANQVYDHRATTSPATDELDMMASSSEKNSDGAGTTASVAVEADTKELRGTESGPVGMDIRSDPVTPFSPPPVSPQLLRPTGRRSPPTSDEKRTAFAATSDSDRQNLGVCEAADVASHITKSEKTTPPSEGLRSGLRAPRAGRNLGLTSSDARRTPGDHREGRLTGFRGDMRGSESPXXXXXXXXVPSRPREAWTEEQTIVQQHDDRNLEEDRQDPDLSGTPAGGGAAGVVTDENGDDHSDRASAAPNKPVTPSDGTNGQRRARRQAKKSKGPRRAPKEGAATVREARVGCDTEKGSRSGNCASLDPPRNDENAREAERSGGGGG-RSK--------AAPIESTVVASDGGPTPERY 955
BLAST of mRNA_Ecto-sp13_S_contig1975.6382.1 vs. uniprot
Match: A0A835ZCZ4_9STRA (CKK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCZ4_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.040e-33 Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 4426 SNRKLVRNAINFLCLAGGHLQERKARALEALDSHPASNFVVLLAHTKLLSFKGLYACRGEDDGSADRVFGLGPPYVDATMASG----------FYKYNSAAREFREVHSKTLGKTTDAISMEP 4764
SNR+L+RNAI LCLAG H++E+KAR LE LD+HPA +FVVLLA K LSF+GLYA E SA R+FG+GP + A F+KYNSAAREFREVHS++ G TDA+SMEP
Sbjct: 3 SNRRLIRNAIAHLCLAGPHVEEQKARCLEVLDAHPAPSFVVLLAQNKSLSFRGLYALWPERAASAQRIFGVGPASLSAEAPPXXXXXXXXXLRFFKYNSAAREFREVHSRSFGGATDAVSMEP 125
BLAST of mRNA_Ecto-sp13_S_contig1975.6382.1 vs. uniprot
Match: A0A7S4DBY7_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBY7_HETAK) HSP 1 Score: 111 bits (278), Expect = 9.670e-23 Identity = 61/122 (50.00%), Postives = 83/122 (68.03%), Query Frame = 1
Query: 4426 SNRKLVRNAINFLCLAGGHLQERKARALEALDSHPASNFVVLLAHTKLLSFKGLYACRGEDDGSADRVFGLGPPYVDATMAS-GFYKYNSAAREFREVHSKTLGKTTDAISMEPTRLKRPKG 4788
SNRKLV+NA+ +CLAG H E+K AL ALDS +S+F++LL K L+FKGLY+ E+ G A+++FGLGP +D+ FYKYNSA +EFRE+ +K TTDA+S++ L R G
Sbjct: 194 SNRKLVKNALQQVCLAGYHNTEKKNEALSALDSCQSSHFLILLNQNKTLAFKGLYSLDLEE-GKAEKLFGLGPSLLDSGYEGLTFYKYNSAGKEFREISTKDFTVTTDAVSLQGQILFRKNG 314
BLAST of mRNA_Ecto-sp13_S_contig1975.6382.1 vs. uniprot
Match: A0A7S1T4D1_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T4D1_9CHLO) HSP 1 Score: 82.0 bits (201), Expect = 5.580e-14 Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 1
Query: 4396 SPAVRGLSRRSNRKLVRNAINFLCLAGGHLQERKARALEALDSHPASN-FVVLLAHTKL-LSFKGLYACRGEDDGSADRVFGLGPPYVDATMASGFYKYNSAAREFREVHSKTL 4731
+P SR SNRKLVRNA+ +CLAGG + K AL A+D++ + F+VL + L FKGLY D G R++G GP VD + ++KY+S AREFR + + T
Sbjct: 52 NPTPPSFSRASNRKLVRNALAHVCLAGGARVKEKEAALAAIDAYKGDDSFIVLFKGSSAPLHFKGLYL-HPRDGGPVARLYGKGPDSVDPQRVATYFKYDSGAREFRAMQTTTF 164
BLAST of mRNA_Ecto-sp13_S_contig1975.6382.1 vs. uniprot
Match: A0A1Y1HU19_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HU19_KLENI) HSP 1 Score: 86.7 bits (213), Expect = 4.210e-13 Identity = 47/120 (39.17%), Postives = 70/120 (58.33%), Query Frame = 1
Query: 4396 SPAVRGLSRRSNRKLVRNAINFLCLAGGHLQERKARALEALDSHPASNFVVLLAHTKLLSFKGLYACRGEDDGSADRVFGLGPPYVDATMASGFYKYNSAAREFREVHSKTLGKTTDAIS 4755
SP R SN+KLVRNA++ +CLAGG L+ + RAL ALD+ NFV+L K FKGLY D DR++G GP + + + + KY+S A+EF+ + ++ +T A++
Sbjct: 1915 SPFYAAPPRMSNKKLVRNALSTVCLAGGALKLERERALMALDAFDGDNFVILFKDDKGTKFKGLYVLSA-DGKEIDRIYGSGPESLRSDGVAHYLKYDSGAKEFKPLQTQQFTTSTCAVA 2033
BLAST of mRNA_Ecto-sp13_S_contig1975.6382.1 vs. uniprot
Match: A0A507EJ44_9FUNG (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507EJ44_9FUNG) HSP 1 Score: 86.3 bits (212), Expect = 5.010e-13 Identity = 44/119 (36.97%), Postives = 73/119 (61.34%), Query Frame = 1
Query: 4423 RSNRKLVRNAINFLCLAGGHLQERKARALEALDSHPASNFVVLLAHTKLLSFKGLYACRGEDDGSADRVFGLGPPYVDATMASGFYKYNSAAREFREVHSKTLGKTTDAISMEPTRLKR 4779
+SNR L+RNA+ +CLAG ++ K LE L + P+++F++L K SF+GLY+ E D A R++G+GP +D + FYKY+S AR F+ + +K+ G++ +++ KR
Sbjct: 1320 QSNRLLIRNALIHVCLAGAVNEQTKQEVLEDLSTSPSTHFIILFRDIKNHSFRGLYSYDPELD-QALRIYGVGPDVLDTNSVAEFYKYDSGARTFKSLPTKSFGRSVHGVAVARELGKR 1437
BLAST of mRNA_Ecto-sp13_S_contig1975.6382.1 vs. uniprot
Match: A0A0L0HRT0_SPIPD (CKK domain-containing protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HRT0_SPIPD) HSP 1 Score: 85.1 bits (209), Expect = 1.020e-12 Identity = 44/119 (36.97%), Postives = 73/119 (61.34%), Query Frame = 1
Query: 4423 RSNRKLVRNAINFLCLAGGHLQERKARALEALDSHPASNFVVLLAHTKLLSFKGLYACRGEDDGSADRVFGLGPPYVDATMASGFYKYNSAAREFREVHSKTLGKTTDAISMEPTRLKR 4779
+SNR L+RNA+ +CLAG ++ K LE L + P+++F++L K SF+GLY+ E D A R++G+GP +D + FYKY+S AR F+ + +K+ G++ +++ KR
Sbjct: 1007 QSNRLLIRNALIHVCLAGAVNEQTKQEVLEDLSTSPSTHFIILFRDVKNHSFRGLYSYDPELD-HALRLYGVGPDVLDTHSVAEFYKYDSGARTFKSLPTKSFGRSVHGVAIAREMGKR 1124
BLAST of mRNA_Ecto-sp13_S_contig1975.6382.1 vs. uniprot
Match: UPI0013901BC2 (uncharacterized protein LOC5518363 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013901BC2) HSP 1 Score: 85.1 bits (209), Expect = 1.240e-12 Identity = 45/114 (39.47%), Postives = 71/114 (62.28%), Query Frame = 1
Query: 4417 SRRSNRKLVRNAINFLCLAGGHLQERKARALEALDSHPASNFVVLLAHTKLLSFKGLYACRGEDDGSADRVFGLGPPYVDATMASGFYKYNSAAREFREVHSKTLGKTTDAISM 4758
S +SNRKL+ NAI+++CL+G ++ K R L+A+ +F+VL L F+GLY+ E++ +VFG+GP + A M YKY+S +EF ++HSKTL + D +S+
Sbjct: 1881 SGKSNRKLIVNAISYVCLSGTVNKDAKERCLQAISESNGYHFMVLFKDG--LKFRGLYSFNPENE-QLYKVFGIGPRVITAKMIDNLYKYSSGGKEFVKIHSKTLSISVDGLSI 1991
BLAST of mRNA_Ecto-sp13_S_contig1975.6382.1 vs. uniprot
Match: A7RQ86_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RQ86_NEMVE) HSP 1 Score: 85.1 bits (209), Expect = 1.320e-12 Identity = 45/114 (39.47%), Postives = 71/114 (62.28%), Query Frame = 1
Query: 4417 SRRSNRKLVRNAINFLCLAGGHLQERKARALEALDSHPASNFVVLLAHTKLLSFKGLYACRGEDDGSADRVFGLGPPYVDATMASGFYKYNSAAREFREVHSKTLGKTTDAISM 4758
S +SNRKL+ NAI+++CL+G ++ K R L+A+ +F+VL L F+GLY+ E++ +VFG+GP + A M YKY+S +EF ++HSKTL + D +S+
Sbjct: 2766 SGKSNRKLIVNAISYVCLSGTVNKDAKERCLQAISESNGYHFMVLFKDG--LKFRGLYSFNPENE-QLYKVFGIGPRVITAKMIDNLYKYSSGGKEFVKIHSKTLSISVDGLSI 2876
BLAST of mRNA_Ecto-sp13_S_contig1975.6382.1 vs. uniprot
Match: UPI00077B23E8 (LOW QUALITY PROTEIN: calmodulin-regulated spectrin-associated protein 1-B-like n=3 Tax=Acropora TaxID=6127 RepID=UPI00077B23E8) HSP 1 Score: 81.3 bits (199), Expect = 1.820e-11 Identity = 44/126 (34.92%), Postives = 73/126 (57.94%), Query Frame = 1
Query: 4417 SRRSNRKLVRNAINFLCLAGGHLQERKARALEALDSHPASNFVVLLAHTKLLSFKGLYACRGEDDGSADRVFGLGPPYVDATMASGFYKYNSAAREFREVHSKTLGKTTDAISMEPTRLKRPKGFV 4794
S +SNRK++ NAI+++CL+G QE+K + L+A+ +F++L L F+G+Y ++D +VFG+GP V + M YKYNS +EF ++ SKT+ + D +M+ + K V
Sbjct: 1798 SGKSNRKIIVNAISYVCLSGTVNQEQKEKCLQAISECDGHHFMILFKDG--LKFRGIYIHNLDND-QLYKVFGIGPRVVTSKMIEFLYKYNSGGKEFTKIPSKTISLSVDGFAMQKSCWNTGKPVV 1920 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1975.6382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1975.6382.1 >prot_Ecto-sp13_S_contig1975.6382.1 ID=prot_Ecto-sp13_S_contig1975.6382.1|Name=mRNA_Ecto-sp13_S_contig1975.6382.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1601bp MFSSVFDKVVSATAPDTLGTFPPRADLPASSSTLCCLSFADRFMSHYPVAback to top mRNA from alignment at Ecto-sp13_S_contig1975:966..8155- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1975.6382.1 ID=mRNA_Ecto-sp13_S_contig1975.6382.1|Name=mRNA_Ecto-sp13_S_contig1975.6382.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7190bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1975:966..8155- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1975:966..8155- >mRNA_Ecto-sp13_S_contig1975.6382.1 ID=mRNA_Ecto-sp13_S_contig1975.6382.1|Name=mRNA_Ecto-sp13_S_contig1975.6382.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=4803bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1975:966..8155- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |