mRNA_Ecto-sp13_S_contig19698.6353.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19698.6353.1 vs. uniprot
Match: D7FL84_ECTSI (Similar to aldehyde oxidase 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL84_ECTSI) HSP 1 Score: 192 bits (488), Expect = 7.220e-62 Identity = 94/105 (89.52%), Postives = 98/105 (93.33%), Query Frame = 1
Query: 1 MPTGNDDRVDDSQKQGTRDHLIFFVNGAKQVVKDAQPQTTLLQHLRAAGLTGTKLGCGEGGCGACTVMVSSFDSDKKQIKHAAVNACLAPVGPFTTSGVAVYFRD 315
MPTGNDD D+Q GTR+HL+FFVNGAKQVVKDAQPQTTLLQHLRAAGLTGTKLGCGEGGCGACTVMVSSFDSDKKQIKHAAVNACLAPVGP TTSGV V+FRD
Sbjct: 1 MPTGNDDAAGDTQ--GTRNHLVFFVNGAKQVVKDAQPQTTLLQHLRAAGLTGTKLGCGEGGCGACTVMVSSFDSDKKQIKHAAVNACLAPVGPLTTSGVVVFFRD 103
BLAST of mRNA_Ecto-sp13_S_contig19698.6353.1 vs. uniprot
Match: A0A6H5JRC2_9PHAE (Xanthine dehydrogenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC2_9PHAE) HSP 1 Score: 174 bits (441), Expect = 1.610e-48 Identity = 83/91 (91.21%), Postives = 87/91 (95.60%), Query Frame = 1
Query: 1 MPTGNDDRVDDSQKQGTRDHLIFFVNGAKQVVKDAQPQTTLLQHLRAAGLTGTKLGCGEGGCGACTVMVSSFDSDKKQIKHAAVNACLAPV 273
MPTG+DD DD+Q QGTRDHLIFFVNGAKQVVKDAQPQTTLLQHLRA GLTGTKLGCGEGGCGACTVMVSSFD++KKQIKHAAVNACLAPV
Sbjct: 1 MPTGHDDAADDTQNQGTRDHLIFFVNGAKQVVKDAQPQTTLLQHLRAVGLTGTKLGCGEGGCGACTVMVSSFDAEKKQIKHAAVNACLAPV 91
BLAST of mRNA_Ecto-sp13_S_contig19698.6353.1 vs. uniprot
Match: D7G4V3_ECTSI (Xanthine dehydrogenase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4V3_ECTSI) HSP 1 Score: 161 bits (408), Expect = 6.380e-44 Identity = 79/91 (86.81%), Postives = 82/91 (90.11%), Query Frame = 1
Query: 1 MPTGNDDRVDDSQKQGTRDHLIFFVNGAKQVVKDAQPQTTLLQHLRAAGLTGTKLGCGEGGCGACTVMVSSFDSDKKQIKHAAVNACLAPV 273
MPT ND DDSQK RDHL+FFVNGAKQVVKDAQPQTTLLQHLRA GLTGTKLGCGEGGCGACTVMVSSFDS+KKQI HAAVNACLAP+
Sbjct: 1 MPTENDYGADDSQKGTCRDHLVFFVNGAKQVVKDAQPQTTLLQHLRAVGLTGTKLGCGEGGCGACTVMVSSFDSEKKQITHAAVNACLAPM 91
BLAST of mRNA_Ecto-sp13_S_contig19698.6353.1 vs. uniprot
Match: A0A836C8N1_9STRA (Xanthine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N1_9STRA) HSP 1 Score: 127 bits (319), Expect = 6.390e-32 Identity = 59/74 (79.73%), Postives = 66/74 (89.19%), Query Frame = 1
Query: 52 RDHLIFFVNGAKQVVKDAQPQTTLLQHLRAAGLTGTKLGCGEGGCGACTVMVSSFDSDKKQIKHAAVNACLAPV 273
RDHL+FFVNG +QVVKDAQP+ TLL LRA+GLTGTKLGCGEGGCGACTVMVSS+D K I+HAAVNACLAP+
Sbjct: 6 RDHLVFFVNGKRQVVKDAQPEVTLLSWLRASGLTGTKLGCGEGGCGACTVMVSSYDHGAKTIRHAAVNACLAPI 79
BLAST of mRNA_Ecto-sp13_S_contig19698.6353.1 vs. uniprot
Match: UPI00052268C1 (xanthine dehydrogenase/oxidase-like n=1 Tax=Leptosomus discolor TaxID=188344 RepID=UPI00052268C1) HSP 1 Score: 100 bits (250), Expect = 1.270e-24 Identity = 49/75 (65.33%), Postives = 56/75 (74.67%), Query Frame = 1
Query: 52 RDHLIFFVNGAKQVVKDAQPQTTLLQHLRAA-GLTGTKLGCGEGGCGACTVMVSSFDSDKKQIKHAAVNACLAPV 273
RD L+FFVNG K V KD P+TTLL +LR GL GTKLGCGEGGCGACTVM+S +D +K+I H NACL PV
Sbjct: 7 RDELVFFVNGKKVVEKDVDPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMISKYDPFRKKILHHTANACLFPV 81
BLAST of mRNA_Ecto-sp13_S_contig19698.6353.1 vs. uniprot
Match: A0A8B7S8X3_HIPAR (xanthine dehydrogenase/oxidase-like n=1 Tax=Hipposideros armiger TaxID=186990 RepID=A0A8B7S8X3_HIPAR) HSP 1 Score: 101 bits (251), Expect = 1.420e-24 Identity = 49/76 (64.47%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 49 TRDHLIFFVNGAKQVVKDAQPQTTLLQHLRAA-GLTGTKLGCGEGGCGACTVMVSSFDSDKKQIKHAAVNACLAPV 273
T D L+FFVNG K V K+A P+TTLL +LR + GL+GTKLGCGEGGCGACTVMVS +D + +I H +VNACL P+
Sbjct: 2 TADELVFFVNGRKVVEKNADPETTLLAYLRRSLGLSGTKLGCGEGGCGACTVMVSKYDRLQNKIIHFSVNACLTPI 77
BLAST of mRNA_Ecto-sp13_S_contig19698.6353.1 vs. uniprot
Match: A0A8B7TCL7_HIPAR (xanthine dehydrogenase/oxidase-like n=1 Tax=Hipposideros armiger TaxID=186990 RepID=A0A8B7TCL7_HIPAR) HSP 1 Score: 98.6 bits (244), Expect = 2.410e-24 Identity = 48/76 (63.16%), Postives = 59/76 (77.63%), Query Frame = 1
Query: 49 TRDHLIFFVNGAKQVVKDAQPQTTLLQHLRAA-GLTGTKLGCGEGGCGACTVMVSSFDSDKKQIKHAAVNACLAPV 273
T D L+FFVNG K V K+A P+TTLL +LR + GL+GTKLGCG GGCGACTVMVS +D + +I H +VNACL P+
Sbjct: 2 TADKLVFFVNGRKVVEKNADPETTLLAYLRRSLGLSGTKLGCGVGGCGACTVMVSKYDHLQNKIVHFSVNACLTPI 77
BLAST of mRNA_Ecto-sp13_S_contig19698.6353.1 vs. uniprot
Match: A0A6P4V651_PANPR (xanthine dehydrogenase/oxidase-like isoform X3 n=2 Tax=Panthera pardus TaxID=9691 RepID=A0A6P4V651_PANPR) HSP 1 Score: 100 bits (250), Expect = 2.770e-24 Identity = 49/76 (64.47%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 49 TRDHLIFFVNGAKQVVKDAQPQTTLLQHLRAA-GLTGTKLGCGEGGCGACTVMVSSFDSDKKQIKHAAVNACLAPV 273
T D L+FFVNG K V K+A P+TTLL +LR GL+GTKLGCGEGGCGACTVM+S +D + +I H +VNACLAP+
Sbjct: 2 TVDELVFFVNGKKVVEKNADPETTLLSYLRRKLGLSGTKLGCGEGGCGACTVMLSKYDRFQNKIIHFSVNACLAPI 77
BLAST of mRNA_Ecto-sp13_S_contig19698.6353.1 vs. uniprot
Match: A0A1Y1YDJ4_9FUNG (Xanthine dehydrogenase n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YDJ4_9FUNG) HSP 1 Score: 105 bits (262), Expect = 3.140e-24 Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 1
Query: 43 QGTRDHLIFFVNGAKQVVKDAQPQTTLLQHLRAAGLTGTKLGCGEGGCGACTVMVSSFDSDKKQIKHAAVNACLAPV 273
Q D L F+VNG + +++ P+ TLLQ+LR AGLTGTKLGCGEGGCGACT++VSS+D D ++I H +VNACLAP+
Sbjct: 4 QSYSDTLTFYVNGTRVALRNPDPEMTLLQYLRHAGLTGTKLGCGEGGCGACTLLVSSYDPDTRKISHTSVNACLAPL 80
BLAST of mRNA_Ecto-sp13_S_contig19698.6353.1 vs. uniprot
Match: UPI000529F83E (xanthine dehydrogenase/oxidase-like n=1 Tax=Colius striatus TaxID=57412 RepID=UPI000529F83E) HSP 1 Score: 99.8 bits (247), Expect = 4.050e-24 Identity = 48/76 (63.16%), Postives = 56/76 (73.68%), Query Frame = 1
Query: 49 TRDHLIFFVNGAKQVVKDAQPQTTLLQHLRAA-GLTGTKLGCGEGGCGACTVMVSSFDSDKKQIKHAAVNACLAPV 273
T D L+FFVNG K V KD P+TTLL +LR GL GTKLGCGEGGCGACTVM+S +D +K+I H NACL P+
Sbjct: 6 TGDELVFFVNGKKVVEKDVDPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMISKYDPFRKKILHHTANACLFPI 81 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19698.6353.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19698.6353.1 >prot_Ecto-sp13_S_contig19698.6353.1 ID=prot_Ecto-sp13_S_contig19698.6353.1|Name=mRNA_Ecto-sp13_S_contig19698.6353.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp MPTGNDDRVDDSQKQGTRDHLIFFVNGAKQVVKDAQPQTTLLQHLRAAGLback to top mRNA from alignment at Ecto-sp13_S_contig19698:1591..2318+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19698.6353.1 ID=mRNA_Ecto-sp13_S_contig19698.6353.1|Name=mRNA_Ecto-sp13_S_contig19698.6353.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=728bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19698:1591..2318+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19698:1591..2318+ >mRNA_Ecto-sp13_S_contig19698.6353.1 ID=mRNA_Ecto-sp13_S_contig19698.6353.1|Name=mRNA_Ecto-sp13_S_contig19698.6353.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=315bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19698:1591..2318+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |