mRNA_Ecto-sp13_S_contig19683.6350.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19683.6350.1 vs. uniprot
Match: A0A6H5L9A2_9PHAE (Fe-ADH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9A2_9PHAE) HSP 1 Score: 573 bits (1477), Expect = 7.180e-204 Identity = 303/317 (95.58%), Postives = 309/317 (97.48%), Query Frame = 1
Query: 1 SGQQVVAQVSRHGRTCLAIADDNTPGQSAGRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEEGESLTVALVDPILCASLSKTQTAAMALTALSSCVDALLARELALASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVVADMLSQANSFSGDVEAAEAIER 951
S +VVAQVSRHGRTCLAIADDNTPGQ+ GRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGE G+SKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEEGESLTVALVDPILC SLSK+QTAAMALTALS+CVDALLARELALASGTPLQNGDALLDLGRRGI AVAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVV DMLSQANSFSGD +AAEAIER
Sbjct: 29 SWTKVVAQVSRHGRTCLAIADDNTPGQAVGRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEDGHSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEEGESLTVALVDPILCTSLSKSQTAAMALTALSACVDALLARELALASGTPLQNGDALLDLGRRGIDAVAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVVGDMLSQANSFSGDAQAAEAIER 345
BLAST of mRNA_Ecto-sp13_S_contig19683.6350.1 vs. uniprot
Match: A0A836CAW8_9STRA (Iron-containing alcohol dehydrogenase-domain containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW8_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.080e-48 Identity = 121/290 (41.72%), Postives = 162/290 (55.86%), Query Frame = 1
Query: 37 GRTCLAIADDNTPGQSAGRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTP-AGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEEGESLT-VALVDPILCASLSKTQTAAMALTALSSCVDALLARELALASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGK--NKLAREL-LTIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVVAD 891
G+ + N SA R LFE+RKAG++C +T + YPTA GIDE MA+RIGA +V +GRGG +DTAKA A L + G C+ FL SP ++G G S+ + + A+P VA+P+ G AA + V HP+D +LVP+ + VALVDP+L ASL +T +MA+ AL++CVDALL A AL GI A+A GLP A A N A+ L L S+ AG AT APP Q +A A GSLL Y + A +FPH +++
Sbjct: 71 GKGLVVHGGSNRAQASAQRILFEIRKAGVDCTTYTVKDLYPTAPGIDEGLSMAKRIGAMSVVGLGRGGVVDTAKAIAALVGTKGKCQHFLESPSDGVLGSSGTSQSKAAYSAAAIPCVAVPSGIGVSAATSPSVHVLHPEDGLLVPMKRHHSLVPRVALVDPLLTASLRETTALSMAVAALAACVDALLVATRAADQDAEASRRQALA---LEGIRAIATGLPAAAAAATALNDSAQRLELVRASIAAGTAVGATAAPPMQTIAMAAGSLLPLTPYSELVASLFPHFLSE 357
BLAST of mRNA_Ecto-sp13_S_contig19683.6350.1 vs. uniprot
Match: E1JTK4_SOLFR (Iron-containing alcohol dehydrogenase n=1 Tax=Solidesulfovibrio fructosivorans JJ] TaxID=596151 RepID=E1JTK4_SOLFR) HSP 1 Score: 89.7 bits (221), Expect = 1.510e-16 Identity = 90/294 (30.61%), Postives = 134/294 (45.58%), Query Frame = 1
Query: 10 QVVAQVSRHGRTCLAIADDNTPGQSAGRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEEGESLTVALVDPILCASLSKTQTAAMALTALSSCVDALLARELALASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPTQLVARATGSLLGR-HSYPSVCAMVFPHVVA 888
Q+ ++ HGR L + A L LR+AG+ +F G P + +AR G +V +G GG +DTAKA A L +++ +L ++G+G +P T LP +A+PT+AG GA A ++ P+ V V L VALVDP+L A++ TAA L AL+ +++ ++ + P+ DAL R G+ A GL A ADG + ARE + + S+ G A G L G H + VCA + P V A
Sbjct: 20 QLPEHIAAHGRAPLIVTGATPERHQA--LLKALRQAGLTVTVFPVAGE-PAVETAATGARLAREAGCDVVVGIGGGGALDTAKAVAALATNTAEILTYLE-----VVGQG---RPLTE--RPLPCIAVPTTAGTGAEATANAVLTVPEARVKVSLRSAMMLPEVALVDPLLSATMPPAVTAATGLDALTQLLESFVSDK-----ANPMT--DALC---REGLPRAARGLAAAYADGNDLQAREDMALASLLGGMALANAKLGAVHGFAAPIGGLFGAPHGF--VCASLLPFVTA 288
BLAST of mRNA_Ecto-sp13_S_contig19683.6350.1 vs. uniprot
Match: UPI0009FE2573 (iron-containing alcohol dehydrogenase n=1 Tax=Solidesulfovibrio alcoholivorans TaxID=81406 RepID=UPI0009FE2573) HSP 1 Score: 83.2 bits (204), Expect = 3.300e-14 Identity = 89/296 (30.07%), Postives = 130/296 (43.92%), Query Frame = 1
Query: 1 SGQQVVAQVSRHGRTCLAIADDNTPGQSAGRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEEGESLTVALVDPILCASLSKTQTAAMALTALSSCVDALLARELALASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVVA 888
+ +Q+ V+R GR L + + Q G L LR AG+ ++ G P D +AR G ++ +G GG +DTAKA A L ++ +L ++G G +P T LPL A PT+AG GA A ++ P+ V V L +ALVDP+L AS+ TAA L AL+ ++A ++ P+ L R G+ A LP+A ADG + ARE + + S+ G A G L + VCA + P V A
Sbjct: 17 TARQLPEHVARRGRAPLVVTGASP--QRHGALLDALRAAGLAVTVYPVAGE-PGVDTAAAGARLAREAGCDLVLGLGGGGALDTAKAVAALATNREDVFNYLE-----VVGAG---RPLTT--RPLPLFAAPTTAGTGAEATANAVLTVPEARVKVSLRSPMLLPELALVDPLLSASMPPAVTAATGLDALTQLLEAFVS-----VKANPMTGA-----LCREGLRRAALALPMAYADGADLAAREDMALASLWGGMALANAKLGAVHGFAAPLGGLFDA-PHGQVCASLLPFVTA 288
BLAST of mRNA_Ecto-sp13_S_contig19683.6350.1 vs. uniprot
Match: A0A7C4R5N7_9DELT (Iron-containing alcohol dehydrogenase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A7C4R5N7_9DELT) HSP 1 Score: 81.3 bits (199), Expect = 1.610e-13 Identity = 94/282 (33.33%), Postives = 129/282 (45.74%), Query Frame = 1
Query: 49 LAIADDNTPGQSAGRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEEGESLTVALVDPILCASLSKTQTAAMALTALSSCVDALLARELALASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYP--SVCAMVFPHVVA 888
L + TPG++A L L G F RG PT + + A E AR GA +V++G G IDTAKA + ++ G FL G+ G KP G LP VA+PT+AG+GA A ++ P V L +A+VDP L L TAA + AL+ ++A ++R PL DAL R GI A LPVA+ADG ++ ARE + + S+ G +A V G G + P +VC + P V A
Sbjct: 76 LFVVTGATPGRAA-FLLEALALRGCAVKAFAVRGE-PTLETVGVALEEARAWGAEALVAIGGGAVIDTAKAVSGWCTNPGDPLDFLE---GI-----GKGKPLERPG--LPWVAVPTTAGSGAEATRNAVIRVPARRAKVSLRSPHLLPRLAVVDPELTLELPPAVTAATGMDALAQLLEAFVSRR-----ANPLT--DALC---REGIPRAARALPVAVADGSDRRAREAMALASLFGG---IALANAGLGAVHGLAGPFGGMAAAPHGAVCGRLLPAVTA 332
BLAST of mRNA_Ecto-sp13_S_contig19683.6350.1 vs. uniprot
Match: A0A2R6GGT4_9EURY (Alcohol dehydrogenase n=3 Tax=unclassified Halobacteriales TaxID=38063 RepID=A0A2R6GGT4_9EURY) HSP 1 Score: 79.0 bits (193), Expect = 8.680e-13 Identity = 80/255 (31.37%), Postives = 119/255 (46.67%), Query Frame = 1
Query: 10 QVVAQVSRHGRTCLAIADDNTPGQSAGRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEEGESL-TVALVDPILCASLSKTQTAAMALTALSSCVDALLARELALASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGKNKLARELLTIGSVCAGQ 771
+V ++ G T L +A G+ R L AGI+ A++ PT + + EA E R G C+V++G G IDTAKA L ++ G +++ G EG PA + PL A+PT+AG G+ A R +V + L E L TVA+ DP L A+L + TA + AL+ ++A ++ S T L R I V LP + A+G + ARE + +G + AGQ
Sbjct: 22 EVGDRLGERGSTALIVATGGVFGRYGDRVRDSLAAAGIDAAVYDEVRPDPTVENVREALETYRASGCDCLVALGGGSPIDTAKAVGVLAANGGEIREYAVDRAGY---EG------VPA-SIPPLAAVPTTAGTGSEAT-RSIVISDESTATKFLVVSTEVLPTVAVEDPELVATLPPSHTAFTGVDALTHAIEAYVSVHAWSMSDT----------LARAAIERVGTALPASWANGDDLDAREAMLVGQLQAGQ 255
BLAST of mRNA_Ecto-sp13_S_contig19683.6350.1 vs. uniprot
Match: A0A7V2N505_9BACT (Iron-containing alcohol dehydrogenase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7V2N505_9BACT) HSP 1 Score: 77.8 bits (190), Expect = 2.000e-12 Identity = 88/301 (29.24%), Postives = 130/301 (43.19%), Query Frame = 1
Query: 1 SGQQVVAQVSRHGRTCLAIADDNTPGQSAGRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVL-----MGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEEGESLTVALVDPILCASLSKTQTAAMALTALSSCVDALLARELALASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVVA 888
+ QQ+ A GR+ L + A L + + G A + G PT G+ AR G ++++G G ID KA A + LT+PG +L +G G R A +PLVA+ T+AGAGA ++ PD +V V + TVALVDP L AS+ TAA L AL+ ++A + R+ PL +G R G+ A L A ADG + AR +++ ++ G A G ++ + +CA + PHVVA
Sbjct: 20 AAQQLPALAGPLGRSALVLTGSRPDRYEA--ILRPMEETGCIRARRSV-GGEPTTSGVQALAAEARDAGVDHVIAIGGGSVIDAGKAVAAM----------LTNPGDLLDYLEVVGRG-----RALAHRPVPLVAVSTTAGAGAEVTRNAVLKVPDRQVKVSMRHAWLLPTVALVDPELTASMPPEVTAATGLDALTQLLEAFVGRK-----ANPLTDGFC-----REGLSRAARSLERAWADGGDLTARTDMSLAALLGGMALANAGLGAVHGFAGPLGGII-EAPHGVICARLLPHVVA 291
BLAST of mRNA_Ecto-sp13_S_contig19683.6350.1 vs. uniprot
Match: A0A841L4T5_9CLOT (Alcohol dehydrogenase n=1 Tax=Anaerosolibacter carboniphilus TaxID=1417629 RepID=A0A841L4T5_9CLOT) HSP 1 Score: 75.1 bits (183), Expect = 1.530e-11 Identity = 64/221 (28.96%), Postives = 103/221 (46.61%), Query Frame = 1
Query: 103 ELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEEGESLTVALVDPILCASLSKTQTAAMALTALSSCVDALLARELALASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGKNKLARELLTIGSVCA 765
+L GI +F G P + +D+ R M +V +G G +D AKAAA L+ + ++L N +P G +P VAIPT+AG G+ +++HP+ LA G ++VDP+L S++ TA + AL+ V+ S T + + + I +AEGLP+A+ DG +K+AR + +GS+ A
Sbjct: 53 DLEYYGIKHYVFDGIYGEPDTEMVDQVRRMIEEEKIDFVVGLGGGSALDVAKAAAGLYGQNLPTAEYL------------NQRPFEYQG--IPFVAIPTTAGTGSEITLNAVLYHPELGNKNSLAHPGFQSKCSIVDPVLTYSMAPEITAMTGMDALTHAVE----------SYTSKMANPVTMAMAGKAISLIAEGLPMAVKDGSDKMARSKMALGSMMA 249
BLAST of mRNA_Ecto-sp13_S_contig19683.6350.1 vs. uniprot
Match: UPI0009756A41 (iron-containing alcohol dehydrogenase n=1 Tax=Bradyrhizobium mercantei TaxID=1904807 RepID=UPI0009756A41) HSP 1 Score: 74.7 bits (182), Expect = 2.200e-11 Identity = 71/244 (29.10%), Postives = 110/244 (45.08%), Query Frame = 1
Query: 40 RTCLAIADDNTPGQS-AGRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEEGESLTVALVDPILCASLSKTQTAAMALTALSSCVDALLARELALASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGKNKLARELLTIGSVCAG 768
R L + D A R +RK G +F A P + A ++AR +G C+V +G G +IDTAK + +S + GN + GN LPLVAIPT+AG G+ ++ + +E A + +AL+D L + + TAA AL A+ C++A +R P+ + AL +G+ + E P+ L+DGKN AR + +G+ AG
Sbjct: 32 RHALIVTDPGIVASGFAERAAHAMRKGGTATTIFDQVAADPPYSVVRAAVQLARNVGCDCVVGLGGGSSIDTAKVVSVSINSEQSLDDMV-----------GNDRVE---GNRLPLVAIPTTAGTGSEVTFVSVLTNDANEKRAIFAPQLMP-DIALLDAELTLGMPRHVTAATALDAMVHCIEAFTSRT----RKNPISDAVAL-----KGLALLVENFPIVLSDGKNLQARNAMLLGATLAG 251
BLAST of mRNA_Ecto-sp13_S_contig19683.6350.1 vs. uniprot
Match: A0A7C4MTS4_9BACT (Iron-containing alcohol dehydrogenase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C4MTS4_9BACT) HSP 1 Score: 74.3 bits (181), Expect = 3.710e-11 Identity = 79/253 (31.23%), Postives = 114/253 (45.06%), Query Frame = 1
Query: 82 SAGRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLV--PLAEEGESLTVALVDPILCASLSKTQTAAMALTALSSCVDALLARELALASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPTQLVARATGSLL 834
+A + L + + A I A G PTA +++ E+AR +V+VG G ID AK A LT G L + R PA A+P+VA+PT+AG GA A + H ++ + P+ TVALVDP L A+ TAA AL+ ++A ++R + P+ L + I V LP ALA N+ AR+ L + + AG + T VA A G+LL
Sbjct: 101 TAEKALTDAKLAVIPFAAVVGE---PTAALVEQGAELARTEQLDVVVAVGGGSVIDAAKGIA-----------LLTRTTGALADYADTTPNRKPAAEAIPVVAVPTTAGTGAEATQVAVFSHQGAKISITAPVLRP----TVALVDPDLSAACDAVTTAACGADALAHAMEACMSR-----AAQPVSTA-----LAFQAIELVVSQLPAALAQPDNREARDALAVAATLAGMALNESGVTLTHSVAHALGALL 325 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19683.6350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19683.6350.1 >prot_Ecto-sp13_S_contig19683.6350.1 ID=prot_Ecto-sp13_S_contig19683.6350.1|Name=mRNA_Ecto-sp13_S_contig19683.6350.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=317bp SGQQVVAQVSRHGRTCLAIADDNTPGQSAGRCLFELRKAGINCAMFTGRGback to top mRNA from alignment at Ecto-sp13_S_contig19683:145..2841- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19683.6350.1 ID=mRNA_Ecto-sp13_S_contig19683.6350.1|Name=mRNA_Ecto-sp13_S_contig19683.6350.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2697bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19683:145..2841- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19683:145..2841- >mRNA_Ecto-sp13_S_contig19683.6350.1 ID=mRNA_Ecto-sp13_S_contig19683.6350.1|Name=mRNA_Ecto-sp13_S_contig19683.6350.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=951bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19683:145..2841- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |