mRNA_Ecto-sp13_S_contig19679.6346.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig19679.6346.1
Unique NamemRNA_Ecto-sp13_S_contig19679.6346.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19679.6346.1 vs. uniprot
Match: D8LJT1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT1_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 3.230e-130
Identity = 190/192 (98.96%), Postives = 191/192 (99.48%), Query Frame = 1 
Query:    1 SIAVQGGAGGEGSLAESSYSIMNNTFRVDSRYSGLKAIGKGSFGFVCSALDEKQGKKVAIKKIHPMAQHVVDAKHVLREIRLMRYLGSHPNIVSLEDLFISEHYDELYIVMELLDSDLHRIIQSPQALGDAHHRYFMFQLLKGVKFLHSNRIIHRDLKPGNVLVTKNCHLRITDFGLARLRPMGRGANPDDE 576
            SIAVQGGAGG+GSLAESSYSIMNNTFRVDSRYSGLKAIGKGSFGFVCSALDEKQGKKVAIKKIHPMAQHVVDAKHVLREIRLMRYLGSHPNIVSLEDLFISEHYDELYIVMELLDSDLHRIIQSPQALGDAHHRYFMFQLLKGVKFLHSNRIIHRDLKPGNVLVTKNCHLRITDFGLARLRPMGRG NPDDE
Sbjct:   34 SIAVQGGAGGKGSLAESSYSIMNNTFRVDSRYSGLKAIGKGSFGFVCSALDEKQGKKVAIKKIHPMAQHVVDAKHVLREIRLMRYLGSHPNIVSLEDLFISEHYDELYIVMELLDSDLHRIIQSPQALGDAHHRYFMFQLLKGVKFLHSNRIIHRDLKPGNVLVTKNCHLRITDFGLARLRPMGRGTNPDDE 225
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BLAST of mRNA_Ecto-sp13_S_contig19679.6346.1 vs. uniprot
Match: A0A835Z9A0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9A0_9STRA)

HSP 1 Score: 276 bits (705), Expect = 4.380e-89
Identity = 136/179 (75.98%), Postives = 152/179 (84.92%), Query Frame = 1 
Query:   40 LAESSYSIMNNTFRVDSRYSGLKAIGKGSFGFVCSALDEKQGKKVAIKKIHPMAQHVVDAKHVLREIRLMRYLGSHPNIVSLEDLFISEHYDELYIVMELLDSDLHRIIQSPQALGDAHHRYFMFQLLKGVKFLHSNRIIHRDLKPGNVLVTKNCHLRITDFGLARLRPMGRGANPDDE 576
            L E SY I+ + F V+SRY  LKA+GKGS+G VCSALD +  K+VAIKKI PMAQ  VDAKHVLREIRLMRYLG HPNI+SLED+ + E  DELYIVMELLDSDLHRIIQS Q L DAHHRYFM+QLL+GVKFLH NRIIHRDLKPGN+LVTK+C LRITDFGLAR RP+GRGA PD+E
Sbjct:   20 LREVSYQILGHVFTVESRYRDLKAVGKGSYGIVCSALDLRTEKRVAIKKITPMAQQAVDAKHVLREIRLMRYLGVHPNIISLEDVAVREFDDELYIVMELLDSDLHRIIQSAQPLSDAHHRYFMYQLLRGVKFLHDNRIIHRDLKPGNLLVTKSCQLRITDFGLARERPLGRGAGPDEE 198
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BLAST of mRNA_Ecto-sp13_S_contig19679.6346.1 vs. uniprot
Match: A0A7S3XUM8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUM8_HETAK)

HSP 1 Score: 251 bits (641), Expect = 1.450e-79
Identity = 120/164 (73.17%), Postives = 143/164 (87.20%), Query Frame = 1 
Query:   55 YSIMNNTFRVDSRYSGLKAIGKGSFGFVCSALDEKQGKKVAIKKIHPMAQHVVDAKHVLREIRLMRYLGSHPNIVSLEDLFISEHYDELYIVMELLDSDLHRIIQSPQALGDAHHRYFMFQLLKGVKFLHSNRIIHRDLKPGNVLVTKNCHLRITDFGLARLRP 546
            ++I    FR ++ Y  LKAIGKGS+G VCSA+D++ G KVAIKKI PMAQ +VDAKHVLREIRLMRYLG+HPNI++LEDL+I E +DELYIVMELLDSDLHRIIQS Q L DAH R+FM+QLLKGVKF+H ++IIHRDLKPGN+LVT+NC LRITDFGLAR++P
Sbjct:   13 HNISGTVFRCEAAYHTLKAIGKGSYGVVCSAVDQRTGHKVAIKKISPMAQDIVDAKHVLREIRLMRYLGTHPNIITLEDLWIKEQHDELYIVMELLDSDLHRIIQSSQPLSDAHFRFFMWQLLKGVKFMHDHQIIHRDLKPGNLLVTRNCELRITDFGLARMKP 176
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BLAST of mRNA_Ecto-sp13_S_contig19679.6346.1 vs. uniprot
Match: A0A7S2WF36_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WF36_9STRA)

HSP 1 Score: 241 bits (616), Expect = 4.640e-78
Identity = 118/167 (70.66%), Postives = 132/167 (79.04%), Query Frame = 1 
Query:   55 YSIMNNTFRVDSRYSGLKAIGKGSFGFVCSALDEKQGKKVAIKKIHPMAQHVVDAKHVLREIRLMRYLGSHPNIVSLEDLFISEHYDELYIVMELLDSDLHRIIQSPQALGDAHHRYFMFQLLKGVKFLHSNRIIHRDLKPGNVLVTKNCHLRITDFGLARLRPMGR 555
            Y I   TF+VD RY  LK IG+GS+G V S  D   GKKVAIKKI PMA HV DAKHVLRE+RLMRYL  HPNI+++ DLF     DELYIVMELLDSDLHRIIQSPQ L +AHHRYFM+QLL+G+KFLH N I+HRDLKPGN+LVT+NC LRITDFGLAR  P  R
Sbjct:    8 YKISGTTFKVDRRYRDLKGIGRGSYGVVVSCEDAVTGKKVAIKKIKPMAAHVADAKHVLREVRLMRYLTEHPNIITMHDLFADAPADELYIVMELLDSDLHRIIQSPQPLTEAHHRYFMYQLLRGIKFLHDNGIVHRDLKPGNLLVTRNCDLRITDFGLAREHPKRR 174
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BLAST of mRNA_Ecto-sp13_S_contig19679.6346.1 vs. uniprot
Match: D8LJT0_ECTSI (Mitogen-activated protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT0_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 1.300e-77
Identity = 120/172 (69.77%), Postives = 139/172 (80.81%), Query Frame = 1 
Query:   64 MNNTFRVDSRYSGLKAIGKGSFGFVCSALDEKQGKKVAIKKIHPMAQHVVDAKHVLREIRLMRYLGSHPNIVSLEDLFISEHYDELYIVMELLDSDLHRII-QSPQALGDAHHRYFMFQLLKGVKFLHSNRIIHRDLKPGNVLVTKNCHLRITDFGLARLRPMGRGANPDDE 576
            M N F +  R+S  K +G+GSFG VCSALD +QGK+VAIKK+ PM++ VV AKH LREIRLMRYL  HPNIVSLEDL +++ YDELYIVMELLD DLH +I +S Q L D HHRYFMFQ+LKGVKFLH NR+IHRDLKP N+L TK C LRITDFGLARLRP G G +PD+E
Sbjct:    1 MENNFHLGPRFSNFKVVGRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARLRPTGAGPDPDNE 172
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BLAST of mRNA_Ecto-sp13_S_contig19679.6346.1 vs. uniprot
Match: A0A6H5K027_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K027_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 7.280e-77
Identity = 119/172 (69.19%), Postives = 139/172 (80.81%), Query Frame = 1 
Query:   64 MNNTFRVDSRYSGLKAIGKGSFGFVCSALDEKQGKKVAIKKIHPMAQHVVDAKHVLREIRLMRYLGSHPNIVSLEDLFISEHYDELYIVMELLDSDLHRII-QSPQALGDAHHRYFMFQLLKGVKFLHSNRIIHRDLKPGNVLVTKNCHLRITDFGLARLRPMGRGANPDDE 576
            + N F +  R+S  K +G+GSFG VCSALD +QGK+VAIKK+ PM++ VV AKH LREIRLMRYL  HPNIVSLEDL +++ YDELYIVMELLD DLH +I +S Q L D HHRYFMFQ+LKGVKFLH NR+IHRDLKP N+L TK C LRITDFGLARLRP G G +PD+E
Sbjct:   56 VENNFHLGPRFSNFKVVGRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARLRPTGAGPDPDNE 227
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BLAST of mRNA_Ecto-sp13_S_contig19679.6346.1 vs. uniprot
Match: A0A4D9DEH4_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEH4_9STRA)

HSP 1 Score: 246 bits (627), Expect = 4.380e-72
Identity = 117/176 (66.48%), Postives = 144/176 (81.82%), Query Frame = 1 
Query:   46 ESSYSIMNNTFRVDSRYSGLKAIGKGSFGFVCSALDEKQGKKVAIKKIHPMAQHVVDAKHVLREIRLMRYLGSHPNIVSLEDLFISEHYDELYIVMELLDSDLHRIIQSPQALGDAHHRYFMFQLLKGVKFLHSNRIIHRDLKPGNVLVTKNCHLRITDFGLARLRPMGRGANPDD 573
            E SY++    F+VD  Y  LK +GKGS+G VCSAL+ +  + VAIK++ P++ HV+DAKHVLREIR+MRYLG+H NI++L+DL + +  DELYIVMELLDSDLHRIIQS QAL DAH R+FM Q+LKG+KFLH +RIIHRDLKPGN+LVT+ C LRITDFGLAR RP G+G NPDD
Sbjct:   21 EVSYNVCGTIFKVDKAYQDLKPVGKGSYGIVCSALNVETKENVAIKRVSPISTHVIDAKHVLREIRMMRYLGTHENIITLKDLALRDADDELYIVMELLDSDLHRIIQSKQALSDAHFRFFMHQVLKGLKFLHDHRIIHRDLKPGNLLVTRACELRITDFGLARARPAGKGQNPDD 196
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BLAST of mRNA_Ecto-sp13_S_contig19679.6346.1 vs. uniprot
Match: F0YI48_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI48_AURAN)

HSP 1 Score: 221 bits (563), Expect = 1.830e-68
Identity = 105/171 (61.40%), Postives = 131/171 (76.61%), Query Frame = 1 
Query:   61 IMNNTFRVDSRYSGLKAIGKGSFGFVCSALDEKQGKKVAIKKIHPMAQHVVDAKHVLREIRLMRYLGSHPNIVSLEDLFISEHYDELYIVMELLDSDLHRIIQSPQALGDAHHRYFMFQLLKGVKFLHSNRIIHRDLKPGNVLVTKNCHLRITDFGLARLRPMGRGANPDD 573
            +  + F V S+Y GLK IG+GS+G V S  D    K++AIK+I PM+ H +D+KHVLREIR MR LG+H NIVS+ DLF   H+DELYIVM+L+DSDLHRIIQSPQ L DAH+RYFM+QL++GV ++H+  IIHRDLKPGN+LVT+NC LRITDFGLAR +        DD
Sbjct:    8 VGGSVFAVKSQYKGLKVIGRGSYGVVASCTDATSSKRLAIKRIKPMSAHCIDSKHVLREIRCMRLLGAHTNIVSIHDLFCDVHHDELYIVMDLMDSDLHRIIQSPQTLTDAHNRYFMYQLVRGVIYIHAQGIIHRDLKPGNLLVTRNCELRITDFGLARQQSAALKGGKDD 178
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BLAST of mRNA_Ecto-sp13_S_contig19679.6346.1 vs. uniprot
Match: A0A7S2CNX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CNX5_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.040e-64
Identity = 101/141 (71.63%), Postives = 117/141 (82.98%), Query Frame = 1 
Query:  115 GKGSFGFVCSALDEKQGKKVAIKKIHPMAQHVVDAKHVLREIRLMRYLGSHPNIVSLEDLFISEHYDELYIVMELLDSDLHRIIQSPQALGDAHHRYFMFQLLKGVKFLHSNRIIHRDLKPGNVLVTKNCHLRITDFGLAR 537
            GKGS+G V SA D + G KVAIKKI PM  H  DAKHVLRE+RLMRYL +HPN++++ +LF +   DELYIVMELLDSDLHRIIQSPQAL DAH RYFM+QL +G+ +LH N IIHRDLKPGN+LVT+NC LRITDFGLAR
Sbjct:    1 GKGSYGVVASANDTELGCKVAIKKIKPMTAHAADAKHVLREVRLMRYLSAHPNVITISNLFANTAADELYIVMELLDSDLHRIIQSPQALSDAHTRYFMYQLFRGIAYLHDNNIIHRDLKPGNLLVTRNCDLRITDFGLAR 141
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BLAST of mRNA_Ecto-sp13_S_contig19679.6346.1 vs. uniprot
Match: A0A5A8EA83_CAFRO (Protein kinase domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8EA83_CAFRO)

HSP 1 Score: 207 bits (528), Expect = 9.360e-63
Identity = 94/171 (54.97%), Postives = 130/171 (76.02%), Query Frame = 1 
Query:   34 GSLAESSYSIMNNTFRVDSRYSGLKAIGKGSFGFVCSALDEKQGKKVAIKKIHPMAQHVVDAKHVLREIRLMRYLGSHPNIVSLEDLFISEHYDELYIVMELLDSDLHRIIQSPQALGDAHHRYFMFQLLKGVKFLHSNRIIHRDLKPGNVLVTKNCHLRITDFGLARLRP 546
            G   ++ + +   TFR+DS+Y  +KA+GKG++G VC+A +++ G  VAIK++ PM     D KH LREIR+MRYLG H N++SL+DL +SE  D +Y+ M L DSDLH+II S Q L +AH+++FMFQLL+G++F H+N IIHRDLKP N+LVTK+C LRI+DFGL+RL P
Sbjct:    5 GRSTKTEFRVYGETFRIDSKYEPVKALGKGAYGVVCAAKNKETGTVVAIKRVSPMCSSATDGKHTLREIRMMRYLGRHENVISLKDLVVSEREDAIYVFMSLCDSDLHKIIVSKQTLTEAHYKHFMFQLLRGLRFAHNNGIIHRDLKPANLLVTKDCRLRISDFGLSRLAP 175
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19679.6346.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJT1_ECTSI3.230e-13098.96Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835Z9A0_9STRA4.380e-8975.98Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S3XUM8_HETAK1.450e-7973.17Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2WF36_9STRA4.640e-7870.66Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
D8LJT0_ECTSI1.300e-7769.77Mitogen-activated protein kinase n=1 Tax=Ectocarpu... [more]
A0A6H5K027_9PHAE7.280e-7769.19Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A4D9DEH4_9STRA4.380e-7266.48Protein kinase domain-containing protein n=2 Tax=M... [more]
F0YI48_AURAN1.830e-6861.40Protein kinase domain-containing protein (Fragment... [more]
A0A7S2CNX5_9STRA1.040e-6471.63Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A5A8EA83_CAFRO9.360e-6354.97Protein kinase domain-containing protein n=2 Tax=S... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19679contigEcto-sp13_S_contig19679:103..3186 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score386.0
Seed ortholog evalue1.1e-104
Seed eggNOG ortholog2880.D8LJT1
Preferred nameMPK11
Model size578
KEGG koko:K04371,ko:K08293,ko:K14512
KEGG Pathwayko01521,ko01522,ko01524,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04016,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04075,ko04114,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05203,ko05205,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map01524,map04010,map04011,map04012,map04013,map04014,map04015,map04016,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04075,map04114,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05203,map05205,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00687
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000165,GO:0000749,GO:0000750,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004707,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007049,GO:0007154,GO:0007165,GO:0007186,GO:0008150,GO:0008152,GO:0009272,GO:0009653,GO:0009987,GO:0010033,GO:0010468,GO:0010927,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019222,GO:0019236,GO:0019538,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0022603,GO:0022607,GO:0023014,GO:0023052,GO:0030154,GO:0030435,GO:0030437,GO:0030476,GO:0031136,GO:0031137,GO:0031139,GO:0031505,GO:0032005,GO:0032502,GO:0032505,GO:0032989,GO:0034293,GO:0035556,GO:0036211,GO:0042173,GO:0042174,GO:0042221,GO:0042244,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043900,GO:0043902,GO:0043934,GO:0043935,GO:0043937,GO:0043939,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045229,GO:0045595,GO:0045596,GO:0046777,GO:0046999,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051321,GO:0051704,GO:0051716,GO:0060255,GO:0065007,GO:0070590,GO:0070591,GO:0070726,GO:0070887,GO:0071310,GO:0071444,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071940,GO:0140096,GO:1901564,GO:1903046,GO:2000241,GO:2000243
Exons4
EggNOG free text desc.MAP kinase activity
EggNOG OGsKOG0660@1,KOG0660@2759
EC2.7.11.24
Cds size576
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462994.10148-CDS-Ecto-sp13_S_contig19679:102..2641681462994.10148-CDS-Ecto-sp13_S_contig19679:102..264Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19679 103..264 +
1681462994.1157715-CDS-Ecto-sp13_S_contig19679:1697..17861681462994.1157715-CDS-Ecto-sp13_S_contig19679:1697..1786Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19679 1698..1786 +
1681462994.125932-CDS-Ecto-sp13_S_contig19679:2348..25321681462994.125932-CDS-Ecto-sp13_S_contig19679:2348..2532Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19679 2349..2532 +
1681462994.1368828-CDS-Ecto-sp13_S_contig19679:3045..31861681462994.1368828-CDS-Ecto-sp13_S_contig19679:3045..3186Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19679 3046..3186 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19679.6346.1prot_Ecto-sp13_S_contig19679.6346.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig19679 103..3186 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig19679.6346.1

>prot_Ecto-sp13_S_contig19679.6346.1 ID=prot_Ecto-sp13_S_contig19679.6346.1|Name=mRNA_Ecto-sp13_S_contig19679.6346.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=192bp
SIAVQGGAGGEGSLAESSYSIMNNTFRVDSRYSGLKAIGKGSFGFVCSAL
DEKQGKKVAIKKIHPMAQHVVDAKHVLREIRLMRYLGSHPNIVSLEDLFI
SEHYDELYIVMELLDSDLHRIIQSPQALGDAHHRYFMFQLLKGVKFLHSN
RIIHRDLKPGNVLVTKNCHLRITDFGLARLRPMGRGANPDDE
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mRNA from alignment at Ecto-sp13_S_contig19679:103..3186+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig19679.6346.1 ID=mRNA_Ecto-sp13_S_contig19679.6346.1|Name=mRNA_Ecto-sp13_S_contig19679.6346.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3084bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19679:103..3186+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCTATCGCGGTACAAGGTGGGGCTGGTGGGGAAGGATCCCTGGCGGAATC
ATCGTATTCCATCATGAACAACACGTTCAGAGTCGACTCGCGCTACAGCG
GCCTCAAGGCCATTGGGAAAGGATCTTTTGGCTTCGTCTGCTCGGCGTTA
GATGAGAAGCAGGTGACTTGTGCGCGAAGGCACTCGGTACGGTGGTGTGG
TTCTACTGCTGTATATCTCGTGCCGTCCGCTACCATGGTTGTTACTTGTT
TGCTGATGCGGTTGCCGTCATCACATAAAAAAACCGTTCCGATCTCTCCT
CGGCTGCTCCTCAGCACGTCCAGCGGTAGTAGACTGCTGAACGCTCCCAA
GGAGGGAAAACCTTCCAATTTCCGTGCACACCGCCTGGGTTGTTGTTGCT
ATTTGTCTTTACTTCAGCAACCGTTCCGATCTTTGCTCAGTACCTTCCAA
CATCCGAGTCACGCGCCTTTTCGTCACAGGTCAACCATATTTATGTACTG
ACGCAAATAGGGTACATTCAACAGCAGACAAGATCAAGCTGCCCAAATAA
GATGAAAAAAAACGGACAGCAGTCTCACCGATCTTTGGAATGTGTATGAT
TCGCATACGATGGTGTGTATCTGTACTGCTGTAGACGACCGAAATTGTTG
TGTGGAACGTCTACAGCAGAGTATATATCGTACGCGCCGACCACTTTTAC
CAGTGTAAGAAACTGGCAGTGTGAAGGAAAACTAAATCAATCCCAAATTG
TGTGGAACGTCTACAGCAGAGTATACATCGTACGCGCCGACCACTTTTAC
CAGTGTAAGAAACTGGCAGTGTGAAGGAAAACAAAATCAATCCCAAAAAG
GACCAACTTATCAAAATAGAAGAGAAGTGCTCGGAGGCAAGAATTCTGCC
TGGTGCACAAAAGAATCGACAGGCTAAATGAAGTATTTTTTTCCTTGTTT
TACATGACCCCATTCGTGAACTGTCCGTCCCCCGTATCCGTGTATGTAAG
CAGGAGAACAAAAAAAACGGGGTTGTTACAATAGTTGATTTCCTACATGC
GTTGTCTTGATTAGTACCATGATTTATCTATTGAGTTTTTCCTACCCATC
GGCCTGTGTGTTGTTTTTCCAACGGAAGAGGGTTGTTGTCCGGGGTCAAA
ACATGCCGTCATTTTTTTGCCATTTAGCAAAAAGACCAATCACTGAAGTA
AGGTAATACAACCTCGAAACGTGCGAGAAGCTCATGCTTCGGCGAGAATC
GAATCCACAACCTGTGATATGTCCAAGCTCGGTTGCCTGTATGCGAGAGA
ACCCTTCGTAACACAGCAAGGGCAAGAGTCAATCCACTCATCTGGATCAC
TTGTCTTTTACTCTTGAGCTGGGTAGTTTGTTTCTCCCACTCGACGATGA
TTTTTTCAGCTATGAACCCATTCCGCCGCTGGTACGCTCGTACGAAGGTG
TACTAAGTACTCAAACACAATCCGCCGCTGGTACTCCACAGTACACATGT
TTACGATGCAGAGTAACTTCTACTGATCTCTTGTTTGCTCAACTTTCCGT
CCACACCGCTCTCGTTTGAACATACAACCGTTTGTGCAACGGCAGGGAAA
GAAGGTTGCCATCAAGAAGATCCACCCTATGGCCCAACACGTCGTTGATG
CCAAGCACGTTTTACGCGAAATCCGTCTTATGAGGTATGGCAGGGCCCTA
GTTTGTGCGAAGTTGCGTTGTGTCCGATGCCCATTATTACCAGTGAGTCA
CCTCTTCGTCATCCTGTGAACGTGATGGCTGGAGGAGAGGGAGTGATGTT
GACTGGAAAGAAGTGTACGTCAAGGAGGCAGCTGTGTAGCGACGAAAGTA
GTCACCGTTCCTCGACTTTACAAGTGGTACCTAGATGTCCACGGTGATAT
CAGACGTCACGCACTTTATACCAACAGAAAAAACAGGTTGCGACGTTTTT
CCTTGCCCCCCCGGCGCACCCGCCCAAACAGTGTGCTTAGGGAAAGGCCT
TCGCGTGGTGATGGCCGTACTAGATAGCCCACGAATCCAGTAATTGCACT
ATGGTTATGCAAGATGTAGCTGCTTGCGCCTCAGGTACATGTTCCACCGT
TGGTCTCCCCCCCGTGCTATATCTTCGACGAACCGCATGTTACCTGATAC
CTGGTAGACTATATCGACGGAGGACCAAGCAGTGCCAACAACGTCCACTA
ACAATGCTGTTATCCTGCTTCGTACACACCAACAACCTTGGTGCAGGTAT
CTCGGATCGCACCCGAACATCGTGTCTCTCGAAGATCTATTCATCAGCGA
GCACTACGACGAGCTGTACATCGTGATGGAGCTGCTAGACTCCGACCTCC
ACCGAATCATTCAGTCGCCTCAGGCGCTAGGCGATGCCCACCACCGGTAC
TTTATGTTTCAGCTCCTCAAGGGGGTTAAGGTTAGTCCAAGATTGAGTTA
TTATTGTTGTTGCGGTGGTGGTGGTGTGGTAGTTTCAGCTGATATGAGTG
GACTGTCATGATCGGCGTCGTTGTACGTCCTGAAGGAATAATTCCAATGG
TTTATTTCCTTGTTGCTCTATCTTTCTTTTCGATGCTTCTCCACGAATTG
TGTTCTGGGTGTTCATGATCAATATTGTCAACCACGTGCCTCCTCGTGTA
CCGTCTTGCTTTGTCAATCGCCCGAAAGAGGCCTGACGTAGGTTGTATCG
CGGCTGCCAATCAAGAATCATCTTTGAGAATGGGCGAACTATTTTGCGCC
CTGCTCAACGTCGGCACGTTGGTTTGCTTGTATGCATAGTCTTGTGCGAC
AACGACGCCATCCACTGCAAGCCTGTTTTATGCACATCCTGGCCACCCTC
TAGCAAGTGGAACCTAGTGGAGTACCAACTATTACCATTTGTGTTGTGAT
TTTTTCTGTTCGCTTTCGTTGTTTTAAATGCTTCGTTCTGCAGTTTCTCC
ACAGCAATCGCATCATCCACCGAGATCTGAAGCCTGGCAACGTGCTCGTG
ACCAAGAACTGCCACCTAAGGATTACGGACTTCGGCTTGGCGAGGCTGAG
ACCCATGGGCAGAGGCGCCAATCCCGATGATGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19679:103..3186+

>mRNA_Ecto-sp13_S_contig19679.6346.1 ID=mRNA_Ecto-sp13_S_contig19679.6346.1|Name=mRNA_Ecto-sp13_S_contig19679.6346.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=576bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19679:103..3186+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCTATCGCGGTACAAGGTGGGGCTGGTGGGGAAGGATCCCTGGCGGAATC
ATCGTATTCCATCATGAACAACACGTTCAGAGTCGACTCGCGCTACAGCG
GCCTCAAGGCCATTGGGAAAGGATCTTTTGGCTTCGTCTGCTCGGCGTTA
GATGAGAAGCAGGGAAAGAAGGTTGCCATCAAGAAGATCCACCCTATGGC
CCAACACGTCGTTGATGCCAAGCACGTTTTACGCGAAATCCGTCTTATGA
GGTATCTCGGATCGCACCCGAACATCGTGTCTCTCGAAGATCTATTCATC
AGCGAGCACTACGACGAGCTGTACATCGTGATGGAGCTGCTAGACTCCGA
CCTCCACCGAATCATTCAGTCGCCTCAGGCGCTAGGCGATGCCCACCACC
GGTACTTTATGTTTCAGCTCCTCAAGGGGGTTAAGTTTCTCCACAGCAAT
CGCATCATCCACCGAGATCTGAAGCCTGGCAACGTGCTCGTGACCAAGAA
CTGCCACCTAAGGATTACGGACTTCGGCTTGGCGAGGCTGAGACCCATGG
GCAGAGGCGCCAATCCCGATGATGAG
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