mRNA_Ecto-sp13_S_contig19649.6334.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig19649.6334.1
Unique NamemRNA_Ecto-sp13_S_contig19649.6334.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19649.6334.1 vs. uniprot
Match: D8LQV5_ECTSI (Acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV5_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 1.190e-26
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 
Query:    1 EAVPPQGECTILCPNHGNSLTDAISVVSQCPRMVRLTAKDNLWKDPIFG 147
            EAVPPQGECTILCPNHGNSLTDAISVVSQCPRMVRLTAKDNLWKDPIFG
Sbjct:   39 EAVPPQGECTILCPNHGNSLTDAISVVSQCPRMVRLTAKDNLWKDPIFG 87
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BLAST of mRNA_Ecto-sp13_S_contig19649.6334.1 vs. uniprot
Match: A0A2R5GMB5_9STRA (Glycerol-3-phosphate O-acyltransferase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMB5_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.310e-10
Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:    1 EAVPPQGECTILCPNHGNSLTDAISVVSQCPRMVRLTAKDNLWKDPIFG 147
            E +P +GE T+LC NHGNSLTD++ ++SQ PR++R  AK+ LW  P+ G
Sbjct:   34 ENLPAEGEPTLLCFNHGNSLTDSVVLISQTPRVIRFCAKNTLWDMPVVG 82
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BLAST of mRNA_Ecto-sp13_S_contig19649.6334.1 vs. uniprot
Match: A0A4P9Y7P6_9FUNG (PlsC domain-containing protein n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y7P6_9FUNG)

HSP 1 Score: 62.8 bits (151), Expect = 3.330e-10
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 1 
Query:    1 EAVPPQGECTILCPNHGNSLTDAISVVSQCPR---MVRLTAKDNLWKDPIFG 147
            E +PP G  +ILCPNH NSLTD + +V+  PR   MVR+TAKD LW   +FG
Sbjct:   43 ENLPPDGVPSILCPNHSNSLTDGVLMVTSAPRQRAMVRMTAKDTLWDHWVFG 94
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BLAST of mRNA_Ecto-sp13_S_contig19649.6334.1 vs. uniprot
Match: A0A8H8DG69_9FUNG (PlsC domain-containing protein n=1 Tax=Olpidium bornovanus TaxID=278681 RepID=A0A8H8DG69_9FUNG)

HSP 1 Score: 55.5 bits (132), Expect = 4.710e-8
Identity = 30/53 (56.60%), Postives = 34/53 (64.15%), Query Frame = 1 
Query:    1 EAVPPQGECTILCPNHGNSLTDAISVVSQCPR----MVRLTAKDNLWK--DPI 141
            E +   G+ TILC NH NSLTD I+VV+  PR    MVRLTAKD  WK  DP 
Sbjct:   31 ENMTSDGQPTILCANHSNSLTDGIAVVATAPRSKRKMVRLTAKDTFWKRNDPF 83
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BLAST of mRNA_Ecto-sp13_S_contig19649.6334.1 vs. uniprot
Match: U9UXF9_RHIID (PlsC domain-containing protein n=9 Tax=Glomeraceae TaxID=36751 RepID=U9UXF9_RHIID)

HSP 1 Score: 55.8 bits (133), Expect = 9.300e-8
Identity = 29/54 (53.70%), Postives = 35/54 (64.81%), Query Frame = 1 
Query:    1 EAVPPQGECTILCPNHGNSLTDAISVVSQCPR----MVRLTAKDNLWK-DPIFG 147
            E +PP G  TILCPNH NSLTD I ++S  P     M+R+TAKD  WK + IF 
Sbjct:   29 ENIPPDGCPTILCPNHSNSLTDPILLLSVVPPEKRDMIRMTAKDTFWKKNDIFS 82
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BLAST of mRNA_Ecto-sp13_S_contig19649.6334.1 vs. uniprot
Match: A0A397IDT0_9GLOM (PlsC domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397IDT0_9GLOM)

HSP 1 Score: 54.7 bits (130), Expect = 2.380e-7
Identity = 25/48 (52.08%), Postives = 32/48 (66.67%), Query Frame = 1 
Query:    1 EAVPPQGECTILCPNHGNSLTDAISVVSQCPR----MVRLTAKDNLWK 132
            E +PP G  TILCPNH NSLTD + ++S  P     +VR+TAKD  W+
Sbjct:   29 ENIPPDGCPTILCPNHSNSLTDPVCLLSSIPSKKRDLVRMTAKDTFWR 76
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BLAST of mRNA_Ecto-sp13_S_contig19649.6334.1 vs. uniprot
Match: K5W1Q6_AGABU (PlsC domain-containing protein n=3 Tax=Agaricus bisporus TaxID=5341 RepID=K5W1Q6_AGABU)

HSP 1 Score: 47.8 bits (112), Expect = 6.710e-5
Identity = 24/50 (48.00%), Postives = 31/50 (62.00%), Query Frame = 1 
Query:    7 VPPQGECTILCPNHGNSLTDAI----SVVSQCPRMVRLTAKDNLWKDPIF 144
            +P  G   ++CPNHGNSLTDA+    S+ SQ   M+RLTAK   +  P F
Sbjct:   38 IPKTGRPCVVCPNHGNSLTDALILTTSIPSQRRNMLRLTAKATQFGHPTF 87
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19649.6334.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LQV5_ECTSI1.190e-26100.00Acyltransferase n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A2R5GMB5_9STRA1.310e-1053.06Glycerol-3-phosphate O-acyltransferase 1 n=1 Tax=H... [more]
A0A4P9Y7P6_9FUNG3.330e-1055.77PlsC domain-containing protein n=1 Tax=Piptocephal... [more]
A0A8H8DG69_9FUNG4.710e-856.60PlsC domain-containing protein n=1 Tax=Olpidium bo... [more]
U9UXF9_RHIID9.300e-853.70PlsC domain-containing protein n=9 Tax=Glomeraceae... [more]
A0A397IDT0_9GLOM2.380e-752.08PlsC domain-containing protein n=1 Tax=Diversispor... [more]
K5W1Q6_AGABU6.710e-548.00PlsC domain-containing protein n=3 Tax=Agaricus bi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19649contigEcto-sp13_S_contig19649:3051..3200 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score110.2
Seed ortholog evalue2.9e-22
Seed eggNOG ortholog2880.D8LQV5
Model size150
KEGG rclassRC00004,RC00039,RC00041
KEGG koko:K13507
KEGG ReactionR00851,R09380
KEGG Pathwayko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110
KEGG ModuleM00089
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
EggNOG free text desc.Phosphate acyltransferases
EggNOG OGs28NCQ@1,2QUY6@2759
EC2.3.1.15,2.3.1.42
Cds size150
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462993.1900735-CDS-Ecto-sp13_S_contig19649:3050..32001681462993.1900735-CDS-Ecto-sp13_S_contig19649:3050..3200Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19649 3051..3200 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19649.6334.1prot_Ecto-sp13_S_contig19649.6334.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig19649 3051..3200 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig19649.6334.1

>prot_Ecto-sp13_S_contig19649.6334.1 ID=prot_Ecto-sp13_S_contig19649.6334.1|Name=mRNA_Ecto-sp13_S_contig19649.6334.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=50bp
EAVPPQGECTILCPNHGNSLTDAISVVSQCPRMVRLTAKDNLWKDPIFG*
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mRNA from alignment at Ecto-sp13_S_contig19649:3051..3200+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig19649.6334.1 ID=mRNA_Ecto-sp13_S_contig19649.6334.1|Name=mRNA_Ecto-sp13_S_contig19649.6334.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=150bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19649:3051..3200+ (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGCGGTGCCACCTCAGGGGGAGTGCACGATTCTGTGCCCTAATCACGG
CAACAGTCTCACGGACGCCATCTCGGTGGTGAGCCAGTGCCCCCGCATGG
TCCGACTCACGGCGAAAGACAACCTTTGGAAGGATCCGATCTTTGGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19649:3051..3200+

>mRNA_Ecto-sp13_S_contig19649.6334.1 ID=mRNA_Ecto-sp13_S_contig19649.6334.1|Name=mRNA_Ecto-sp13_S_contig19649.6334.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=150bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19649:3051..3200+ (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGCGGTGCCACCTCAGGGGGAGTGCACGATTCTGTGCCCTAATCACGG
CAACAGTCTCACGGACGCCATCTCGGTGGTGAGCCAGTGCCCCCGCATGG
TCCGACTCACGGCGAAAGACAACCTTTGGAAGGATCCGATCTTTGGGTGA
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