mRNA_Ecto-sp13_S_contig1949.6267.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1949.6267.1 vs. uniprot
Match: A0A6H5LBB4_9PHAE (TsaA-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBB4_9PHAE) HSP 1 Score: 1127 bits (2915), Expect = 0.000e+0 Identity = 596/640 (93.12%), Postives = 609/640 (95.16%), Query Frame = 2
Query: 218 MGPTAAVIATNILALCSALAVGFAVGRFAGGGGKKETQQHPCSVRGAKRRARIKKSEDNSRAKAAGLASXXXXXXXXXXXVLSSRRTRSRKKKLGPRCLALDAWTRVARSYITSIGEGDYESLLLLPRACFIVAGRFVPYAECRDQLVSLGQARAATAGVEQLRVLYVSCSWASAGGGEGKGWAVQDFETTRAYLQRNPDLSFVYVGRSCVAGSSSSTGHVRSTQLRHVAPALLRSDAVLVLPRLAECAGGGESSGSMGSRYTDFECSARGSRSRMVLAIAAVGQAKVFVAFRAGSYPESVVELELGKGNVRATAKQAVDALRAAAAKRPQKSTAAVVKEACENWLGADLNPLSALEQARAVVEEAQKSDDGEALENIRTMRPAPSFAANARAVLGDEFVGGERELALSMLLFAVLCSQPKERATYTENFVQDVGKMEISYRPVAVVRSPYRERFGTPRQPQVTASVLHGGAQEGQIVFLRGRGYEEALQDLSGFDMIWVLTHMHLNKGWNPKVRPPRLPEERKGLFSTRSPHRPNAIALSSLRVGRVDAANGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDHEGQGNFLPKFSVGATLVHTDPGSKRSPTWTASRKPPATNQVEAS 2137
MGPT AV+A NILAL SAL VG+AVGRF GGGGKKETQQHPCSVRGAKRRARIKKSEDNSRA+AAGLASXXXXXXXXXXX TRSRKKKL PRCLALDAWTRVARSYI SIGEGDYESLLLLPR CFIVAGRFVPYAECRDQLVSLGQARAATAGVEQLRVLYVSCSWASAGGGEG GWAVQDFETTRAYLQRNPDLSFVYVGRSCV GSSSSTGHVRSTQLRHVAPALLRSDAVLVLPRLA+ GG E SGS G+RYTDFECSARGSRSRMVLAIAAVGQAKVFVAFRAGSYPESVVELELGK NVRATAKQAVDALRAAAAKRPQKSTAAVV+EACENWLGADLNPLSALEQARAVVEEAQ+SDDGEALENI++MRPAPSFAANARA LGDEF+G ERELALSMLLFAVLCSQ KERATYTENFV+DVGKMEISY PVAVVRSPYRERFGTPRQPQVTASVLHGGAQEGQIVFLRGRGYEEALQDLSGFDMIWVLTHMHLNKGWNPKVRPPRLPEERKGLFSTRSPHRPNAIALSSLRVGRVDAANGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDHE QG+FLPKFSVGATLVHTD GSKRSPT TASRKPP +QVEAS
Sbjct: 1 MGPTVAVVAANILALSSALVVGYAVGRFEGGGGKKETQQHPCSVRGAKRRARIKKSEDNSRARAAGLASXXXXXXXXXXXXXXXXXTRSRKKKLAPRCLALDAWTRVARSYIKSIGEGDYESLLLLPRECFIVAGRFVPYAECRDQLVSLGQARAATAGVEQLRVLYVSCSWASAGGGEGTGWAVQDFETTRAYLQRNPDLSFVYVGRSCVVGSSSSTGHVRSTQLRHVAPALLRSDAVLVLPRLAKSPGGEEGSGSTGTRYTDFECSARGSRSRMVLAIAAVGQAKVFVAFRAGSYPESVVELELGKSNVRATAKQAVDALRAAAAKRPQKSTAAVVEEACENWLGADLNPLSALEQARAVVEEAQRSDDGEALENIQSMRPAPSFAANARAALGDEFIGEERELALSMLLFAVLCSQRKERATYTENFVEDVGKMEISYCPVAVVRSPYRERFGTPRQPQVTASVLHGGAQEGQIVFLRGRGYEEALQDLSGFDMIWVLTHMHLNKGWNPKVRPPRLPEERKGLFSTRSPHRPNAIALSSLRVGRVDAANGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDHERQGDFLPKFSVGATLVHTDAGSKRSPTRTASRKPPTADQVEAS 640
BLAST of mRNA_Ecto-sp13_S_contig1949.6267.1 vs. uniprot
Match: A0A835YNQ9_9STRA (TsaA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNQ9_9STRA) HSP 1 Score: 222 bits (565), Expect = 4.260e-64 Identity = 100/154 (64.94%), Postives = 122/154 (79.22%), Query Frame = 2
Query: 1547 VAVVRSPYRERFGTPRQPQVTASVLHGGAQEGQIVFLRGRGYEEALQDLSGFDMIWVLTHMHLNKGWNPKVRPPRLPEERKGLFSTRSPHRPNAIALSSLRVGRVDAANGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDHE 2008
+ VVRSPY+ERFGTPRQ VTA VL G AQ GQ+VF RGR +E AL+DL GFD +WV+++MHLN+GWNPKV+PPR P ++GLFSTRSPHRPN+IALS++++ VD + V GLDLLDGTP+LDIKPY+ YCDAFP K GWL+ L S E
Sbjct: 6 IGVVRSPYKERFGTPRQANVTAGVLEGKAQHGQLVFSRGRNFEVALEDLDGFDYVWVISYMHLNQGWNPKVKPPRGPRVKRGLFSTRSPHRPNSIALSAVKIVSVDPKGLTVTVEGLDLLDGTPILDIKPYVPYCDAFPGAKTGWLEELSSIDE 159
BLAST of mRNA_Ecto-sp13_S_contig1949.6267.1 vs. uniprot
Match: A0A7S3XP01_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP01_HETAK) HSP 1 Score: 208 bits (529), Expect = 6.210e-58 Identity = 100/172 (58.14%), Postives = 124/172 (72.09%), Query Frame = 2
Query: 1478 KERATYTENFVQDVGKMEISYRPVAVVRSPYRERFGTPRQPQVTASVLHGGAQEGQIVFLRGRGYEEALQDLSGFDMIWVLTHMHLNKGWNPKVRPPRLPEERK-GLFSTRSPHRPNAIALSSLRVGRVDAANGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDA 1990
K + YTE F +S +AVVRSPY+ERFGTPRQP VT L G AQ G+IVF + R +E ALQDL GF+ W++T+ HLNKGWNPKV+PPR + K GLF+TRSPHRPN I LS+ ++ VD GV+ V GLDLLDGTPVLD+KPY+ Y DAFP+ +AGWL++
Sbjct: 55 KPQQFYTEQFTTPES---VSMETIAVVRSPYKERFGTPRQPVVTKGTLGGSAQIGEIVFKKNRNFEIALQDLEGFEYCWLITYFHLNKGWNPKVKPPRGKHDAKLGLFATRSPHRPNPIGLSACKIHSVDHRQGVVRVAGLDLLDGTPVLDLKPYVPYADAFPHARAGWLNS 223
BLAST of mRNA_Ecto-sp13_S_contig1949.6267.1 vs. uniprot
Match: A0A7S1WEL1_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WEL1_ALECA) HSP 1 Score: 193 bits (491), Expect = 4.990e-53 Identity = 86/164 (52.44%), Postives = 123/164 (75.00%), Query Frame = 2
Query: 1526 MEISYRPVAVVRSPYRERFGTPRQPQVTASVLHGGAQEGQIVFLRGRGYEEAL--QDLSGFDMIWVLTHMHLNKGWNPKVRPPRLPEERKGLFSTRSPHRPNAIALSSLRVGRVDAANGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDHEG 2011
++++ R + VVRSPY+ERFG PRQP ++ VL G AQEG I FL + AL +DL GF+ IW++ ++HLN+GW+P+V PPR +++GLF+TRSPHRPN I+LS+ ++ VDA + V GLDLLDGTPVLD+KPY+ YCD++P+ +AGW+D + +H+G
Sbjct: 39 LQVTLRTIGVVRSPYKERFGCPRQPPISKGVLGGSAQEGTIQFLDNPDGDIALALKDLEGFERIWIVGYLHLNEGWSPRVTPPRGARQKRGLFATRSPHRPNHISLSACQLLSVDAKAKTLTVRGLDLLDGTPVLDVKPYVPYCDSYPSARAGWIDEVEGEHDG 202
BLAST of mRNA_Ecto-sp13_S_contig1949.6267.1 vs. uniprot
Match: UPI001AD54E4C (tRNA (Adenine(37)-N6)-methyltransferase n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI001AD54E4C) HSP 1 Score: 191 bits (485), Expect = 1.060e-52 Identity = 89/152 (58.55%), Postives = 113/152 (74.34%), Query Frame = 2
Query: 1547 VAVVRSPYRERFGTPRQPQVTASVLHGGAQEGQIVFLRGRGYEEALQDLSGFDMIWVLTHMHLNKGWNPKVRPPRLPEERKGLFSTRSPHRPNAIALSSLRVGRVDAANGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSD 2002
+ V SPY+ERFGTPRQP VT L AQE I + GR +E+AL+DL GF+ IWVL +HLN+GWNP+V PPR P+ ++GLF+TR+PHRPN+I LS+L++ +D + V G+DLLDGTPVLDIKPYI Y DAFP +AGWL+ L SD
Sbjct: 25 IGYVHSPYKERFGTPRQPPVTEQTLDDRAQEAMIELVPGRNFEQALKDLEGFEYIWVLAWLHLNEGWNPQVIPPRGPKVKRGLFATRAPHRPNSIGLSALKLVGIDGRT--LKVSGIDLLDGTPVLDIKPYIPYSDAFPKARAGWLEGLKSD 174
BLAST of mRNA_Ecto-sp13_S_contig1949.6267.1 vs. uniprot
Match: R1DL83_EMIHU (TsaA-like domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DL83_EMIHU) HSP 1 Score: 193 bits (491), Expect = 5.380e-52 Identity = 99/200 (49.50%), Postives = 126/200 (63.00%), Query Frame = 2
Query: 1493 YTENFVQDVGKMEISYRPVAVVRSPYRERFGTPRQPQVTASVLHGGAQEGQIVFLRGRGYEEALQDLSGFDMIWVLTHMHLNKGWNPKVRPPRLPEERK-GLFSTRSPHRPNAIALSSLRVGRVDAANGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDHEGQGNFLPKFSV----GATLVHTDPGSK 2077
YT+ F D ++ P+ V+RSPY+ERFGTPRQP VT V GGAQ G I G + L+ L+GFD W +T MHLN GW P VRPPR P K G+F+TR+PHRPN IALS+L+V VD A + V GLDLLDGTPVLD+KPY+ Y D+FP KAGW+D + ++ + G + P + + T P SK
Sbjct: 32 YTDAFA-DHAAAPVTLTPIGVIRSPYKERFGTPRQPTVTTQVSGGGAQRGCIELRPDAGLDHTLRGLAGFDYCWAITLMHLNAGWKPLVRPPRGPRRAKQGVFATRAPHRPNPIALSALKVVEVDEAALRVTVEGLDLLDGTPVLDLKPYVPYADSFPRAKAGWVDEVRAEEDRLGYWPPPPHLLQQQRVAMCQTSPASK 230
BLAST of mRNA_Ecto-sp13_S_contig1949.6267.1 vs. uniprot
Match: A0A0G4F040_VITBC (TsaA-like domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F040_VITBC) HSP 1 Score: 192 bits (488), Expect = 5.670e-52 Identity = 98/181 (54.14%), Postives = 122/181 (67.40%), Query Frame = 2
Query: 1532 ISYRPVAVVRSPYRERFGTPRQPQVTASVLHGGAQEGQIVFLRGRGYEEALQDLSGFDMIWVLTHMHLNKGWNPKVR--PPRLPEERKGLFSTRSPHRPNAIALSSLRVGRVDAANGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDHEGQ------GNFLPKFSVGAT 2050
I P+ VVRSPY+ERFGTPRQP VT L G Q + LRG GYE L+D+ GF+ +W++T+MHLN+GW KVR P +LP R GLF+TR+PHRPN +ALS++ V VD G +++ GLDLLDGTPVLDIKPY+ Y DAFP+ AGWLD D E Q G+ LP + G T
Sbjct: 87 IEMHPIGVVRSPYKERFGTPRQPVVTEGTLGGVKQNATVQLLRGHGYEACLEDVEGFERVWLITYMHLNQGWRSKVRVYPRKLPR-RLGLFATRAPHRPNQLALSAVEVVGVDVDAGQLHILGLDLLDGTPVLDIKPYVPYADAFPDSAAGWLDQY--DREQQMGRDEFGHELPPWCAGDT 264
BLAST of mRNA_Ecto-sp13_S_contig1949.6267.1 vs. uniprot
Match: A0A6N6JQK0_9BACT (tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO n=3 Tax=Bacteria TaxID=2 RepID=A0A6N6JQK0_9BACT) HSP 1 Score: 189 bits (479), Expect = 7.270e-52 Identity = 88/149 (59.06%), Postives = 111/149 (74.50%), Query Frame = 2
Query: 1556 VRSPYRERFGTPRQPQVTASVLHGGAQEGQIVFLRGRGYEEALQDLSGFDMIWVLTHMHLNKGWNPKVRPPRLPEERKGLFSTRSPHRPNAIALSSLRVGRVDAANGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSD 2002
VRSPY+ERFGTPRQP VTA L A + +I L +E+ALQDL GF+ IWVL +HLN GWNP+V PPR P+ ++GLF+TR+PHRPN I LS+LR+ RV+ V++V G+DLLDGTPVLD+KPY+ Y DAF +AGWL+ L D
Sbjct: 28 VRSPYKERFGTPRQPVVTAQTLEDRALDARIELLPAMNFEQALQDLEGFEYIWVLAWLHLNSGWNPQVMPPRGPKVKRGLFATRAPHRPNPIGLSALRLIRVEGR--VLHVRGIDLLDGTPVLDVKPYVPYSDAFAAARAGWLEGLAQD 174
BLAST of mRNA_Ecto-sp13_S_contig1949.6267.1 vs. uniprot
Match: A0A7V8E2B3_9BACT (TsaA-like domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V8E2B3_9BACT) HSP 1 Score: 189 bits (479), Expect = 7.270e-52 Identity = 90/154 (58.44%), Postives = 113/154 (73.38%), Query Frame = 2
Query: 1532 ISYRPVAVVRSPYRERFGTPRQPQVTASVLHGGAQEGQIVFLRGRGYEEALQDLSGFDMIWVLTHMHLNKGWNPKVRPPRLPEERKGLFSTRSPHRPNAIALSSLRVGRVDAANGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDAL 1993
+S + VRSPY+ERFGTPRQP VT L A E I L GR +E+AL+DL GFD IWVL +HLN+GW+P+V PPR PE ++GLF+TR+PHRPN I+LS+LR+ ++ V+ V G+DLLDGTPVLDIKPYI Y DAFP+ + GWL L
Sbjct: 20 VSCEIIGHVRSPYKERFGTPRQPPVTEQTLEDRALEASIELLPGRNFEQALKDLEGFDYIWVLAWLHLNEGWSPQVIPPRGPEVKRGLFATRAPHRPNPISLSALRLLGIEGR--VLKVRGIDLLDGTPVLDIKPYIPYSDAFPDARTGWLKGL 171
BLAST of mRNA_Ecto-sp13_S_contig1949.6267.1 vs. uniprot
Match: A0A7S3A0C0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A0C0_9RHOD) HSP 1 Score: 191 bits (484), Expect = 9.020e-52 Identity = 86/154 (55.84%), Postives = 111/154 (72.08%), Query Frame = 2
Query: 1532 ISYRPVAVVRSPYRERFGTPRQPQVTASVLHGGAQEGQIVFLRGRGYEEALQDLSGFDMIWVLTHMHLNKGWNPKVRPPRLPEERKGLFSTRSPHRPNAIALSSLRVGRVDAANGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDAL 1993
+S + + VVRSPY+ERFGTPRQ V + Q+G+I + YE AL+ L GFD WV+ MHLN GWNP V PPR P ++G+F+TR+PHRPN I+LS+L++ RVD N +++V GLDLLDGTP+LDIKPY+ Y DAFPN AGWLD +
Sbjct: 48 MSVQAIGVVRSPYKERFGTPRQATVWEQSIGNAPQDGEIHLIGDPRYEHALRGLDGFDYCWVICWMHLNTGWNPLVTPPRGPRTKQGIFATRAPHRPNPISLSALKITRVDYKNRIVHVKGLDLLDGTPILDIKPYVPYADAFPNAAAGWLDNI 201 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1949.6267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1949.6267.1 >prot_Ecto-sp13_S_contig1949.6267.1 ID=prot_Ecto-sp13_S_contig1949.6267.1|Name=mRNA_Ecto-sp13_S_contig1949.6267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=641bp MGPTAAVIATNILALCSALAVGFAVGRFAGGGGKKETQQHPCSVRGAKRRback to top mRNA from alignment at Ecto-sp13_S_contig1949:7778..10938+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1949.6267.1 ID=mRNA_Ecto-sp13_S_contig1949.6267.1|Name=mRNA_Ecto-sp13_S_contig1949.6267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3161bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1949:7778..10938+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1949:7778..10938+ >mRNA_Ecto-sp13_S_contig1949.6267.1 ID=mRNA_Ecto-sp13_S_contig1949.6267.1|Name=mRNA_Ecto-sp13_S_contig1949.6267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1923bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1949:7778..10938+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |